FC929955

Overview
NameFC929955
Unique NameFC929955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_VANPO (NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.603e-33
Identity = 67/132 (50.76%), Postives = 94/132 (71.21%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP 696
            G EV++ YTP +LDS+  G+FEL+IK Y QG++S  F  +++GD + V+GPKG + Y     +   M AGGSG+TPM+Q+ ++I ENP DKTKV  IY NV   DILL+++LD FAA  P Q TI+Y+L++P
Sbjct:   88 GSEVVRSYTPISLDSEAKGYFELLIKSYEQGKISKMFTSLKIGDTIDVQGPKGFYEYTDRSSKHLAMIAGGSGLTPMYQIIKSIAENPKDKTKVTFIYGNVEEIDILLRDDLDKFAASKPGQITIHYLLDKP 219          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_CANGA (NADH-cytochrome b5 reductase 1 OS=Candida glabrata GN=CBR1 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.603e-33
Identity = 65/132 (49.24%), Postives = 94/132 (71.21%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSD-VGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP 696
            G+ V + YTPT+LD + VG FEL++K YP+G +S H  +M++G+ + + GP+G + Y P   +   M AGG+GITPMFQ+ +AI  +P+DKT+V L+Y NV  EDILLK+ELD    + PDQF I Y+L++P
Sbjct:   87 GKPVSRSYTPTSLDEECVGFFELLVKSYPEGNISKHIGDMKIGEKINISGPRGFYEYVPNVHKHLAMVAGGTGITPMFQIMKAIARDPSDKTRVTLLYGNVLEEDILLKQELDDLVKQRPDQFKITYLLDKP 218          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_EMENI (NADH-cytochrome b5 reductase 1 OS=Emericella nidulans GN=cbr1 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.025e-32
Identity = 69/140 (49.29%), Postives = 96/140 (68.57%), Query Frame = 1
Query:  295 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN-----PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   ++VGD + V+GPKG   Y P   R  GM AGG+GITPM Q+ +AI+ N      ND T+V LI+ANV  +DILLK+EL+  AA+  D F IYYVLN PP
Sbjct:  110 EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKVGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGGNDTTQVDLIFANVNPDDILLKDELEKLAAE-DDGFRIYYVLNNPP 248          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPTN (NADH-cytochrome b5 reductase 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.339e-32
Identity = 68/140 (48.57%), Postives = 95/140 (67.86%), Query Frame = 1
Query:  295 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN-----PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   +++GD L V+GPKG   Y P   R  GM AGG+GITPM Q+ +AI+ N      ND TK+ LI+ANV  EDILL++EL+   AK  D F I+YVLN PP
Sbjct:   93 EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTLKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGGNDTTKIDLIFANVNEEDILLRDELEKL-AKEDDGFRIFYVLNNPP 231          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPOR (NADH-cytochrome b5 reductase 1 OS=Aspergillus oryzae GN=cbr1 PE=3 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.749e-32
Identity = 68/140 (48.57%), Postives = 94/140 (67.14%), Query Frame = 1
Query:  295 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN-----PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   +++GD + V+GPKG   Y P   R  GM AGG+GITPM Q+ +AI+ N      ND T+V LI+ANV  EDILLKEEL+    K  D F +YYVLN PP
Sbjct:   89 EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDNMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAIIRNRPRNGGNDTTQVDLIFANVNPEDILLKEELEQL-VKEDDGFRVYYVLNNPP 227          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPNC (NADH-cytochrome b5 reductase 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=cbr1 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.680e-32
Identity = 67/137 (48.91%), Postives = 93/137 (67.88%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN-----PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G+EV++ YTP + D++ G+F+L++K YPQG +S +   + VG  + V+GPKG   Y P   R  GM AGG+GITPM+Q+ +AI+ N      ND T+V LI+ANV  +DIL+K+EL+   AK  D F IYYVLN PP
Sbjct:  105 GKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLEVGQTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMYQIIKAIIRNRPRNGGNDTTQVDLIFANVNPDDILMKDELEQL-AKEDDGFRIYYVLNNPP 240          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_ARATH (NADH-cytochrome b5 reductase-like protein OS=Arabidopsis thaliana GN=At5g20080 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.134e-31
Identity = 67/141 (47.52%), Postives = 97/141 (68.79%), Query Frame = 1
Query:  280 AQRGKDSQGEE--VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP 696
            A  G +++G+   VI+PYTP +     G+F+L+IK+YP G+MS HF  ++ GD L VKGP  +F+Y P   +  GM AGGSGITPM QV  AI++NP D T++ L+YANV+ +DILLK++LD   A +P+   I+Y ++ P
Sbjct:  118 APLGYNAEGKTKYVIRPYTPISDPEAKGYFDLLIKVYPDGKMSQHFASLKPGDVLEVKGPVEKFKYSPNMKKHIGMIAGGSGITPMLQVIDAIVKNPEDNTQISLLYANVSPDDILLKQKLDVLQANHPN-LKIFYTVDNP 257          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_AJECN (NADH-cytochrome b5 reductase 1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=CBR1 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.134e-31
Identity = 66/140 (47.14%), Postives = 93/140 (66.43%), Query Frame = 1
Query:  295 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAIL-----ENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            + Q +E+++ YTP + D + G+F+L++K YPQG +S H   +R+G  + V+GPKG   Y P  V+  GM AGG+GITPM Q+ +AI+        ND T+V LI+ANV  +DILLK+ELD   AK  D F ++YVLN PP
Sbjct:  107 EGQTKEIMRSYTPISSDQEAGYFDLLVKAYPQGNISKHLAGLRIGQTMKVRGPKGAMVYTPNMVKKIGMIAGGTGITPMLQIIKAIIRGRPRNGGNDTTQVDLIFANVNPDDILLKDELDQL-AKEDDGFRVFYVLNNPP 245          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_NEUCR (NADH-cytochrome b5 reductase 1 OS=Neurospora crassa GN=cbr-1 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.934e-31
Identity = 68/137 (49.64%), Postives = 92/137 (67.15%), Query Frame = 1
Query:  295 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN--PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            D   +E+++ YTP + D   G+F+L+IK YP G +S H   ++VG  + VKGPKG F Y P  VR FGM AGG+GITPM QV RAI+      D+T+V LI+ANVT +DILLKE+LD   A+      ++YVL++PP
Sbjct:  110 DGSTKEIVRSYTPISGDHQPGYFDLLIKSYPTGNISKHMASLQVGQTIRVKGPKGAFVYTPNMVRHFGMVAGGTGITPMLQVIRAIVRGRAAGDRTEVDLIFANVTAQDILLKEDLDALVAQ-DKGIRVHYVLDRPP 245          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_MAGGR (NADH-cytochrome b5 reductase 1 OS=Magnaporthe grisea GN=CBR1 PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.934e-31
Identity = 70/137 (51.09%), Postives = 92/137 (67.15%), Query Frame = 1
Query:  295 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN--PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            D   +EV++ YTP + D   G+ +L+IK YP G +S +   + VG  + V+GPKG F YQP  VR FGM AGG+GITPM QV RAI+      D T+V LI+ANVT EDILLKE+LD  AA+    F ++YVL++PP
Sbjct:  109 DGSSKEVVRSYTPISGDEQPGYVDLLIKSYPTGNISKYMAGLSVGQSIRVRGPKGAFVYQPNMVRHFGMIAGGTGITPMLQVVRAIVRGRAAGDTTQVDLIFANVTKEDILLKEDLDALAAE-DKGFRVHYVLDRPP 244          
The following BLAST results are available for this feature:
BLAST of FC929955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
NCB5R_VANPO4.603e-3350.76NADH-cytochrome b5 reductase 1 OS=Vanderwaltozyma ... [more]
NCB5R_CANGA4.603e-3349.24NADH-cytochrome b5 reductase 1 OS=Candida glabrata... [more]
NCB5R_EMENI1.025e-3249.29NADH-cytochrome b5 reductase 1 OS=Emericella nidul... [more]
NCB5R_ASPTN1.339e-3248.57NADH-cytochrome b5 reductase 1 OS=Aspergillus terr... [more]
NCB5R_ASPOR1.749e-3248.57NADH-cytochrome b5 reductase 1 OS=Aspergillus oryz... [more]
NCB5R_ASPNC8.680e-3248.91NADH-cytochrome b5 reductase 1 OS=Aspergillus nige... [more]
NCB5R_ARATH1.134e-3147.52NADH-cytochrome b5 reductase-like protein OS=Arabi... [more]
NCB5R_AJECN1.134e-3147.14NADH-cytochrome b5 reductase 1 OS=Ajellomyces caps... [more]
NCB5R_NEUCR1.934e-3149.64NADH-cytochrome b5 reductase 1 OS=Neurospora crass... [more]
NCB5R_MAGGR1.934e-3151.09NADH-cytochrome b5 reductase 1 OS=Magnaporthe gris... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34002C03EF PostHarvC1 Citrus clementina cDNA clone C34002C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929955 ID=FC929955; Name=FC929955; organism=Citrus clementina; type=EST; length=701bp
GAGAGCACCAGAAGATAAGAAATGGAATAAACCGCACACTATTTTCTCTC
CCACCCATTTACTGGTTCCATTTCTTGTTTTGATTTTTGAGTTAAAAATT
TATTCTCTATATACATATATTGATAAATCCGAGGCTTTTAGTTCTTCTAT
TGGTGAGCTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAG
ATGTTCAGCTTCTCGTTGGTGGAGCTGTGGCTGTTTTGGCCATTGCTGTT
GGTGCTGCTTACTTGTATTCCTCTAAGAAGCCCAAAGGGGCAAGGATAGT
CAGGGTGAAGAGGTTATTAAACCATATACCCCAACCACATTGGATTCTGA
TGTTGGTCATTTTGAATTGGTTATTAAGATGTACCCCCAAGGAAGGATGT
CACACCATTTCCGTGAGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGA
CCCAAGGGTCGATTCAGGTATCAACCTGGCCAGGTCAGAGCATTTGGGAT
GACTGCAGGAGGTTCTGGCATCACTCCAATGTTCCAAGTTACTAGAGCCA
TATTAGAGAACCCAAATGACAAGACAAAGGTGCACCTCATTTATGCCAAT
GTTACATATGAGGACATTCTTTTAAAGGAAGAATTGGATGGATTTGCGGC
GAAGTACCCTGATCAATTCACAATCTACTATGTGTTGAATCAGCCTCCTG
A
back to top