FC929955

Overview
NameFC929955
Unique NameFC929955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_YARLI (NADH-cytochrome b5 reductase 2 OS=Yarrowia lipolytica GN=MCR1 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.348e-31
Identity = 60/132 (45.45%), Postives = 88/132 (66.67%), Query Frame = 1
Query:  301 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP 696
            +G  V++PYTP +     G FELV+K YP+G+MS H  E++ GD L+ KGP  ++++QP   +   +   G+GITP++Q+  AI +NP DKTKV+L Y N T  DILLK+E+D  A   P QF ++Y L++P
Sbjct:   88 KGSNVVRPYTPVSDPDSKGEFELVVKSYPEGKMSKHIHELKEGDTLSFKGPIIKYQWQPNLHKEITLIGAGTGITPLYQLISAINKNPEDKTKVNLFYGNATEGDILLKDEIDAIAKAKPQQFNVHYFLDKP 219          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_ASPOR (NADH-cytochrome b5 reductase 2 OS=Aspergillus oryzae GN=mcr1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.637e-30
Identity = 59/129 (45.74%), Postives = 88/129 (68.22%), Query Frame = 1
Query:  313 VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            V++PYTPT+ +   G+ +LV+K+YP G MS H   M V   L+ KGP  +++++  +     + AGG+GITPM+Q+ R I +NP+DKTKV L+Y NVT +DILLK+EL      YP +F  +Y+L++PP
Sbjct:  124 VLRPYTPTSDEDQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLSFKGPLPKYQWETNKHEHIALIAGGTGITPMYQLIRQIFKNPDDKTKVTLVYGNVTEDDILLKKELQDLENTYPQRFKAFYLLDKPP 252          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1A_VANPO (NADH-cytochrome b5 reductase 2-A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=MCR1A PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.138e-30
Identity = 59/132 (44.70%), Postives = 88/132 (66.67%), Query Frame = 1
Query:  301 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP 696
            +G  VI+PYTP +   + G  +LVIK YP G+M++H   ++V D L+ KGP  ++++ P    +  +  GG+GITP++Q+  AI +NPNDKTK+ L Y+N T +D+L+K+ELD   AKYPDQ  I Y +  P
Sbjct:   94 KGSNVIRPYTPVSDVDEKGSLDLVIKHYPDGKMTNHIFSLKVNDTLSFKGPIPKWKWVPNSFESITLIGGGTGITPLYQLIHAITKNPNDKTKIRLFYSNKTSQDVLMKKELDELQAKYPDQLRITYFITTP 225          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_YEAST (NADH-cytochrome b5 reductase 1 OS=Saccharomyces cerevisiae GN=CBR1 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 61/132 (46.21%), Postives = 89/132 (67.42%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP 696
            G+++ + YTPT+LD D  G+FEL++K YP G +S    E+++GD + +KGP+G + Y+       GM AGG+GI PM+Q+ +AI  +P+D TKV L++ NV  EDILLK+EL+   A  P QF I Y L+ P
Sbjct:   85 GKDITRSYTPTSLDGDTKGNFELLVKSYPTGNVSKMIGELKIGDSIQIKGPRGNYHYERNCRSHLGMIAGGTGIAPMYQIMKAIAMDPHDTTKVSLVFGNVHEEDILLKKELEALVAMKPSQFKIVYYLDSP 216          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_COCIM (NADH-cytochrome b5 reductase 2 OS=Coccidioides immitis GN=MCR1 PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.647e-30
Identity = 61/128 (47.66%), Postives = 85/128 (66.41%), Query Frame = 1
Query:  316 IKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            I+PYTP + +   G+ +LV+K YP G MS H   M VG  L+ KGP  ++ ++  +     M AGG+GITPM+Q+ R I  NPNDKTKV L++ N+T EDILLK+ELD     YP +F  +Y+L++PP
Sbjct:  127 IRPYTPVSEEEQPGYLDLVVKQYPNGPMSTHLHNMAVGQQLSFKGPIPKYPWEQNKHDHICMIAGGTGITPMYQIIRKIFNNPNDKTKVTLVFGNITEEDILLKKELDILENTYPRRFRAFYLLDKPP 254          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_ASPTN (NADH-cytochrome b5 reductase 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=mcr1 PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30
Identity = 61/136 (44.85%), Postives = 88/136 (64.71%), Query Frame = 1
Query:  292 KDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            K   G+ V++PYTP + +S  G  +LV+K+YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+Q+ R I +NP DKTKV L+Y NV+ +DILLK+EL+     YP +F  +YVL+ PP
Sbjct:  113 KPEGGKAVLRPYTPVSDESQPGFLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPLPKYPWEANKHQHICLIAGGTGITPMYQLARHIFKNPEDKTKVTLVYGNVSEQDILLKKELEELENTYPQRFKAFYVLDNPP 248          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_EMENI (NADH-cytochrome b5 reductase 2 OS=Emericella nidulans GN=mcr1 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.810e-29
Identity = 60/129 (46.51%), Postives = 83/129 (64.34%), Query Frame = 1
Query:  313 VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            VI+PYTPT+ +   G+ ELV+K YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+Q+ R I +NP DKTKV L++ NV+ EDILLK E +     YP +F  +YVL+ PP
Sbjct:  123 VIRPYTPTSDEDQPGYLELVVKRYPNGPMSEHLHNMNVDQRLDFKGPLPKYPWEANKHKHICLVAGGTGITPMYQLAREIFKNPEDKTKVTLVFGNVSEEDILLKREFEDLENTYPQRFRAFYVLDNPP 251          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NCB5R_YEAS7 (NADH-cytochrome b5 reductase 1 OS=Saccharomyces cerevisiae (strain YJM789) GN=CBR1 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.364e-29
Identity = 60/132 (45.45%), Postives = 88/132 (66.67%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDV-GHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP 696
            G+++ + YTPT+LD D  G+FEL++K YP G +S    E+++GD + +KGP+G + Y+       GM AGG+GI PM+Q+ +AI  + +D TKV L++ NV  EDILLK+EL+   A  P QF I Y L+ P
Sbjct:   85 GKDITRSYTPTSLDGDTKGNFELLVKSYPTGNVSKMIGELKIGDSIQIKGPRGNYHYERNCRSHLGMIAGGTGIAPMYQIMKAIAMDSHDTTKVSLVFGNVHEEDILLKKELEALVAMKPSQFKIVYYLDSP 216          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_SCLS1 (NADH-cytochrome b5 reductase 2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.087e-29
Identity = 63/138 (45.65%), Postives = 87/138 (63.04%), Query Frame = 1
Query:  286 RGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            +G + Q +  I+PYTPT+ + + G  +L++K YP G MS H  EM  G  L  KGP  ++ +   +     + AGG+GITPM+Q+ RAI  NP DKTKV L++ANVT EDILLK E +     YP +F  +YVL+ PP
Sbjct:  138 KGPEMQ-KPAIRPYTPTSDEGEKGFIDLLVKKYPNGVMSEHMHEMVPGQRLDFKGPIPKYAWSANKHDHIALIAGGTGITPMYQLARAIFNNPADKTKVTLVFANVTEEDILLKREFEDLENTYPQRFRAFYVLDNPP 274          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_BOTFB (NADH-cytochrome b5 reductase 2 OS=Botryotinia fuckeliana (strain B05.10) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.087e-29
Identity = 63/138 (45.65%), Postives = 88/138 (63.77%), Query Frame = 1
Query:  286 RGKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            +G + Q +  I+PYTPT+ +S+ G  +L++K YP G MS H  +M  G  L  KGP  ++ +   +     + AGG+GITPM+Q+ RAI  NP DKTKV L++ANVT EDILLK E +     YP +F  +YVL+ PP
Sbjct:  139 KGPEMQ-KPAIRPYTPTSDESEQGFIDLLVKKYPNGVMSEHMHDMVPGQRLDFKGPIPKYPWSANKHDHIALIAGGTGITPMYQLARAIFNNPADKTKVTLVFANVTEEDILLKREFEDLENTYPQRFRAFYVLDNPP 275          
The following BLAST results are available for this feature:
BLAST of FC929955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
MCR1_YARLI7.348e-3145.45NADH-cytochrome b5 reductase 2 OS=Yarrowia lipolyt... [more]
MCR1_ASPOR1.637e-3045.74NADH-cytochrome b5 reductase 2 OS=Aspergillus oryz... [more]
MCR1A_VANPO2.138e-3044.70NADH-cytochrome b5 reductase 2-A OS=Vanderwaltozym... [more]
NCB5R_YEAST2.792e-3046.21NADH-cytochrome b5 reductase 1 OS=Saccharomyces ce... [more]
MCR1_COCIM3.647e-3047.66NADH-cytochrome b5 reductase 2 OS=Coccidioides imm... [more]
MCR1_ASPTN6.221e-3044.85NADH-cytochrome b5 reductase 2 OS=Aspergillus terr... [more]
MCR1_EMENI1.810e-2946.51NADH-cytochrome b5 reductase 2 OS=Emericella nidul... [more]
NCB5R_YEAS72.364e-2945.45NADH-cytochrome b5 reductase 1 OS=Saccharomyces ce... [more]
MCR1_SCLS13.087e-2945.65NADH-cytochrome b5 reductase 2 OS=Sclerotinia scle... [more]
MCR1_BOTFB3.087e-2945.65NADH-cytochrome b5 reductase 2 OS=Botryotinia fuck... [more]

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Properties
Property NameValue
Genbank descriptionC34002C03EF PostHarvC1 Citrus clementina cDNA clone C34002C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929955 ID=FC929955; Name=FC929955; organism=Citrus clementina; type=EST; length=701bp
GAGAGCACCAGAAGATAAGAAATGGAATAAACCGCACACTATTTTCTCTC
CCACCCATTTACTGGTTCCATTTCTTGTTTTGATTTTTGAGTTAAAAATT
TATTCTCTATATACATATATTGATAAATCCGAGGCTTTTAGTTCTTCTAT
TGGTGAGCTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAG
ATGTTCAGCTTCTCGTTGGTGGAGCTGTGGCTGTTTTGGCCATTGCTGTT
GGTGCTGCTTACTTGTATTCCTCTAAGAAGCCCAAAGGGGCAAGGATAGT
CAGGGTGAAGAGGTTATTAAACCATATACCCCAACCACATTGGATTCTGA
TGTTGGTCATTTTGAATTGGTTATTAAGATGTACCCCCAAGGAAGGATGT
CACACCATTTCCGTGAGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGA
CCCAAGGGTCGATTCAGGTATCAACCTGGCCAGGTCAGAGCATTTGGGAT
GACTGCAGGAGGTTCTGGCATCACTCCAATGTTCCAAGTTACTAGAGCCA
TATTAGAGAACCCAAATGACAAGACAAAGGTGCACCTCATTTATGCCAAT
GTTACATATGAGGACATTCTTTTAAAGGAAGAATTGGATGGATTTGCGGC
GAAGTACCCTGATCAATTCACAATCTACTATGTGTTGAATCAGCCTCCTG
A
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