FC929955

Overview
NameFC929955
Unique NameFC929955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_YEAST (NADH-cytochrome b5 reductase 2 OS=Saccharomyces cerevisiae GN=MCR1 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.032e-29
Identity = 56/130 (43.08%), Postives = 89/130 (68.46%), Query Frame = 1
Query:  301 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLN 690
            +G  V++PYTP +  S  GHF+LV+K Y  G+M+ H   ++  D ++ KGP  ++++QP Q ++  +   G+GI P++Q+   I+ENPNDKTKV+L+Y N T +DILL++ELD    KYPD+F + Y ++
Sbjct:   98 KGSNVVRPYTPVSDLSQKGHFQLVVKHYEGGKMTSHLFGLKPNDTVSFKGPIMKWKWQPNQFKSITLLGAGTGINPLYQLAHHIVENPNDKTKVNLLYGNKTPQDILLRKELDALKEKYPDKFNVTYFVD 227          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_YEAS7 (NADH-cytochrome b5 reductase 2 OS=Saccharomyces cerevisiae (strain YJM789) GN=MCR1 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.032e-29
Identity = 56/130 (43.08%), Postives = 89/130 (68.46%), Query Frame = 1
Query:  301 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLN 690
            +G  V++PYTP +  S  GHF+LV+K Y  G+M+ H   ++  D ++ KGP  ++++QP Q ++  +   G+GI P++Q+   I+ENPNDKTKV+L+Y N T +DILL++ELD    KYPD+F + Y ++
Sbjct:   98 KGSNVVRPYTPVSDLSQKGHFQLVVKHYEGGKMTSHLFGLKPNDTVSFKGPIMKWKWQPNQFKSITLLGAGTGINPLYQLAHHIVENPNDKTKVNLLYGNKTPQDILLRKELDALKEKYPDKFNVTYFVD 227          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_ASPNC (NADH-cytochrome b5 reductase 2 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.032e-29
Identity = 60/136 (44.12%), Postives = 87/136 (63.97%), Query Frame = 1
Query:  292 KDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            K +  + VI+PYTPT+ +   G+ +LV+K+YP G MS H   M VG  L  KGP  ++ ++  +     + AGG+GITPM+Q+ R I +NP D+TKV L++ NV  EDILLK+E +     YP +F  +YVL+ PP
Sbjct:  116 KPADAKAVIRPYTPTSDEETPGYIDLVVKVYPNGPMSEHLHSMNVGQRLDFKGPIVKYPWETNKHNHICLIAGGTGITPMYQLAREIFKNPEDQTKVTLVFGNVKEEDILLKKEFEELENTYPRRFRAFYVLDNPP 251          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_ASPCL (NADH-cytochrome b5 reductase 2 OS=Aspergillus clavatus GN=mcr1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.032e-29
Identity = 59/136 (43.38%), Postives = 89/136 (65.44%), Query Frame = 1
Query:  292 KDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            K ++G+ VI+PYTP + +   G+ +LV+K+YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+Q+ R I +NP D+TKV L++ NV+ EDILLK+EL      +P +F  +YVL+ PP
Sbjct:  116 KPAEGKPVIRPYTPVSDEDQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPIPKYPWETNKHKHICLIAGGTGITPMYQLARQIFKNPEDQTKVTLVFGNVSEEDILLKKELQELENTHPRRFKAFYVLDNPP 251          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_DEBHA (NADH-cytochrome b5 reductase 2 OS=Debaryomyces hansenii GN=MCR1 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.982e-29
Identity = 58/133 (43.61%), Postives = 87/133 (65.41%), Query Frame = 1
Query:  301 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            +G  VI+PYTP +     G  E VIK Y  G+MS H  +++  D LA KGP  +++++P Q ++  +  GG+GITP++Q+   I +NP DKTKV+L Y N+T +DIL+K+ELD  A K+ DQ  + Y L++ P
Sbjct:   97 KGNNVIRPYTPISDVDGKGSIEFVIKKYDGGKMSSHIHDLKPNDTLAFKGPVVKWKWEPNQYKSIALIGGGTGITPLYQLMHEITKNPEDKTKVNLFYGNLTEKDILIKKELDTIAEKHKDQVNVVYFLDKAP 229          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_LODEL (NADH-cytochrome b5 reductase 2 OS=Lodderomyces elongisporus GN=MCR1 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.458e-28
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 1
Query:  301 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQ 693
            +G  VI+PYTP +     G  + VIK Y  G+MS+H   ++ G+ L+ KGP  +++++P Q ++  +  GG+GITP++Q+ R I  NP DKTKV LIY N + ED+L+K+ +D  AAK+ DQ  + Y +++
Sbjct:   96 KGNNVIRPYTPVSDPDQKGTLDFVIKRYENGKMSNHIHNLKEGETLSFKGPVVKWKWEPNQFKSIALIGGGTGITPLYQLLREITSNPEDKTKVSLIYGNTSPEDVLIKDRIDDIAAKHKDQVKVTYFVDE 226          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_CANAL (NADH-cytochrome b5 reductase 2 OS=Candida albicans GN=MCR1 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.458e-28
Identity = 55/131 (41.98%), Postives = 89/131 (67.94%), Query Frame = 1
Query:  301 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQ 693
            +G  VI+PYTP +  +  G  + VIK Y  G+MS H  +++ G+ L+ KGP  +++++P Q ++  +  GG+GITP++Q+   I  NP D TKV+LIY N+T EDILLK+E+D  A+K+ DQ  ++Y +++
Sbjct:   98 KGNNVIRPYTPVSDVNQSGEIDFVIKKYDGGKMSSHIFDLKEGETLSFKGPIVKWKWEPNQFKSIALIGGGTGITPLYQLLHQITSNPKDNTKVNLIYGNLTPEDILLKKEIDAIASKHKDQVKVHYFVDK 228          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_PICGU (NADH-cytochrome b5 reductase 2 OS=Pichia guilliermondii GN=MCR1 PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28
Identity = 57/132 (43.18%), Postives = 88/132 (66.67%), Query Frame = 1
Query:  298 SQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQ 693
            ++G  VI+PYTP +     G  + VIK Y  G+MS HF  ++ GD ++ KGP  +++++P Q ++  +  GG+GITP++Q+   I +NP DKTKV L Y N+T EDIL+K+ELD  A K+ DQ +I Y +++
Sbjct:   91 AKGNNVIRPYTPVSDVDQKGTIDFVIKKYDGGKMSTHFHGLKEGDTVSFKGPIVKWKWEPNQFQSIALIGGGTGITPLYQLLHEITKNPEDKTKVKLFYGNLTEEDILIKKELDDIAEKHKDQVSITYFVDK 222          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_AJECN (NADH-cytochrome b5 reductase 2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=MCR1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27
Identity = 58/131 (44.27%), Postives = 86/131 (65.65%), Query Frame = 1
Query:  316 IKPYTPTTLD---SDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            I+PYTP + +   + +G+ +L++K YP G MS+H   M VG  L  KGP  ++ ++P +     + AGG+GITPM+Q+ R I  NP DKTKV L++ANVT EDILL++E +     YP +F  +Y L++PP
Sbjct:  123 IRPYTPVSDEGMWASLGYLDLLVKRYPNGPMSNHLHNMAVGQRLDFKGPLPKYPWEPSKHDHICLIAGGTGITPMYQLVRKIFSNPEDKTKVTLVFANVTEEDILLRKEFEHLENTYPRRFRAFYTLDKPP 253          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NIA1_ORYSJ (Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. japonica GN=NIA1 PE=2 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27
Identity = 63/151 (41.72%), Postives = 97/151 (64.24%), Query Frame = 1
Query:  301 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQ---------GRMSHHFREMRVGDYLAVKGPKGRFRY----------QPGQVRAFGMTAGGSGITPMFQVTRAIL-ENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQ 693
            +G+  ++ YTPT++  +VGHF+L+IK+Y +         G M+ +   + VG Y+ VKGP G   Y          +P   R   M AGGSGITPM+QV +++L + P D T++HL+YAN T +DILL++ELD +AA+YPD+  ++YV++Q
Sbjct:  702 EGKLCMRAYTPTSMVDEVGHFDLLIKVYFKNEHPKFPDGGLMTQYLDSLPVGAYIDVKGPLGHVEYTGRGEFVINGKPRNARRLAMIAGGSGITPMYQVIQSVLRDQPEDTTEMHLVYANRTEDDILLRDELDRWAAEYPDRLKVWYVIDQ 852          
The following BLAST results are available for this feature:
BLAST of FC929955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
MCR1_YEAST4.032e-2943.08NADH-cytochrome b5 reductase 2 OS=Saccharomyces ce... [more]
MCR1_YEAS74.032e-2943.08NADH-cytochrome b5 reductase 2 OS=Saccharomyces ce... [more]
MCR1_ASPNC4.032e-2944.12NADH-cytochrome b5 reductase 2 OS=Aspergillus nige... [more]
MCR1_ASPCL4.032e-2943.38NADH-cytochrome b5 reductase 2 OS=Aspergillus clav... [more]
MCR1_DEBHA8.982e-2943.61NADH-cytochrome b5 reductase 2 OS=Debaryomyces han... [more]
MCR1_LODEL4.458e-2841.22NADH-cytochrome b5 reductase 2 OS=Lodderomyces elo... [more]
MCR1_CANAL4.458e-2841.98NADH-cytochrome b5 reductase 2 OS=Candida albicans... [more]
MCR1_PICGU5.822e-2843.18NADH-cytochrome b5 reductase 2 OS=Pichia guillierm... [more]
MCR1_AJECN1.297e-2744.27NADH-cytochrome b5 reductase 2 OS=Ajellomyces caps... [more]
NIA1_ORYSJ1.694e-2741.72Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. ... [more]

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Properties
Property NameValue
Genbank descriptionC34002C03EF PostHarvC1 Citrus clementina cDNA clone C34002C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929955 ID=FC929955; Name=FC929955; organism=Citrus clementina; type=EST; length=701bp
GAGAGCACCAGAAGATAAGAAATGGAATAAACCGCACACTATTTTCTCTC
CCACCCATTTACTGGTTCCATTTCTTGTTTTGATTTTTGAGTTAAAAATT
TATTCTCTATATACATATATTGATAAATCCGAGGCTTTTAGTTCTTCTAT
TGGTGAGCTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAG
ATGTTCAGCTTCTCGTTGGTGGAGCTGTGGCTGTTTTGGCCATTGCTGTT
GGTGCTGCTTACTTGTATTCCTCTAAGAAGCCCAAAGGGGCAAGGATAGT
CAGGGTGAAGAGGTTATTAAACCATATACCCCAACCACATTGGATTCTGA
TGTTGGTCATTTTGAATTGGTTATTAAGATGTACCCCCAAGGAAGGATGT
CACACCATTTCCGTGAGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGA
CCCAAGGGTCGATTCAGGTATCAACCTGGCCAGGTCAGAGCATTTGGGAT
GACTGCAGGAGGTTCTGGCATCACTCCAATGTTCCAAGTTACTAGAGCCA
TATTAGAGAACCCAAATGACAAGACAAAGGTGCACCTCATTTATGCCAAT
GTTACATATGAGGACATTCTTTTAAAGGAAGAATTGGATGGATTTGCGGC
GAAGTACCCTGATCAATTCACAATCTACTATGTGTTGAATCAGCCTCCTG
A
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