FC929955

Overview
NameFC929955
Unique NameFC929955
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_ASPFU (NADH-cytochrome b5 reductase 2 OS=Aspergillus fumigatus GN=mcr1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27
Identity = 59/135 (43.70%), Postives = 87/135 (64.44%), Query Frame = 1
Query:  301 QGEE--VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            QG E  VI+PYTP + +   G+ +LV+K+YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+Q+ R I ++P D+TKV L++ NV  EDILLK+EL+     YP +F  +Y+L+ PP
Sbjct:  118 QGAEKPVIRPYTPVSDEEQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPIPKYPWEANKHKHICLIAGGTGITPMYQLARKIFKDPEDQTKVTLVFGNVREEDILLKKELEELENTYPRRFRAFYLLDHPP 252          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_NEOFI (NADH-cytochrome b5 reductase 2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mcr1 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27
Identity = 57/129 (44.19%), Postives = 83/129 (64.34%), Query Frame = 1
Query:  313 VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            VI+PYTP + +   G+ +LV+K+YP G MS H   M V   L  KGP  ++ ++  + +   + AGG+GITPM+Q+ R I ++P D+TKV L++ NV  EDILLK+EL      YP +F  +YVL+ PP
Sbjct:  124 VIRPYTPVSDEEQPGYLDLVVKVYPNGPMSEHLHSMNVDQRLEFKGPIPKYPWEANKHKHICLIAGGTGITPMYQLARKIFKDPEDQTKVTLVFGNVREEDILLKKELQELENTYPRRFRAFYVLDHPP 252          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_NEUCR (NADH-cytochrome b5 reductase 2 OS=Neurospora crassa GN=mcr-1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.890e-27
Identity = 56/129 (43.41%), Postives = 85/129 (65.89%), Query Frame = 1
Query:  313 VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            V++PYTP + +S  G+ +L++K Y  G MS +  +M  G  L +KGP  ++ ++  + +   + AGG+GITPM+Q+ RAI  NP+DKTKV L++ NV+ ED+LLK EL      YP +F  +YVL+ PP
Sbjct:  144 VLRPYTPISDESAQGYIDLLVKKYEGGPMSTYLHDMAPGQRLDIKGPLPKYPWEANKHKHIALVAGGTGITPMYQLIRAIFNNPDDKTKVTLVFGNVSEEDVLLKHELATIENHYPQRFRAFYVLDNPP 272          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_CHAGB (NADH-cytochrome b5 reductase 2 OS=Chaetomium globosum GN=MCR1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.929e-27
Identity = 59/129 (45.74%), Postives = 82/129 (63.57%), Query Frame = 1
Query:  313 VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            VI+PYTPT  +   G+ +L++K YP G MS H  +M  G  L VKGP  ++ +   +     + AGG+GITPMFQ+ RAI  NP+D+TKV L++ NV  +DILLK+EL       P +F  +YVL+ PP
Sbjct:  149 VIRPYTPTNDEDARGYLDLLVKKYPNGPMSTHLHDMVPGQRLDVKGPLPKYPWTANKHGHIALVAGGTGITPMFQLCRAIFNNPDDQTKVTLVFGNVREDDILLKKELAALENNNPRRFRAFYVLDDPP 277          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_PHANO (NADH-cytochrome b5 reductase 2 OS=Phaeosphaeria nodorum GN=MCR1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.437e-27
Identity = 56/129 (43.41%), Postives = 80/129 (62.02%), Query Frame = 1
Query:  313 VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            VI+PYTP +     G  + ++K Y +G MS H   M  G  L +KGP  ++ + P +     + AGG+GITPM+Q  RAI +NP DKTKV L++ N++ EDILLK+E +     YP +F  +YVL+ PP
Sbjct:  136 VIRPYTPVSDVDQQGTVDFIVKKYEKGPMSSHMHNMEPGQRLDIKGPIPKYPWSPNKHEHIALIAGGTGITPMWQTARAIFKNPEDKTKVTLVFGNISEEDILLKKEWEHLENTYPQRFRAFYVLDNPP 264          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_MAGGR (NADH-cytochrome b5 reductase 2 OS=Magnaporthe grisea GN=MCR1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26
Identity = 57/129 (44.19%), Postives = 81/129 (62.79%), Query Frame = 1
Query:  313 VIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            V++PYTP + +   G+ +L++K Y  G MS H  E+  G  L  KGP  ++ +   +     M AGG+GITPM+Q+ RAI +NP DKTKV L+  N+T EDILLK++L      YP +F  +YVL+ PP
Sbjct:  132 VLRPYTPISDEDQKGYLDLIVKKYEGGPMSTHIHELVPGQKLDFKGPLPKYEWSANKHPHVAMIAGGTGITPMYQIMRAIFKNPADKTKVTLVVGNITEEDILLKKQLAELENTYPQRFRAFYVLDNPP 260          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NB5R1_HUMAN (NADH-cytochrome b5 reductase 1 OS=Homo sapiens GN=CYB5R1 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26
Identity = 63/157 (40.13%), Postives = 94/157 (59.87%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDVGHFELVIKMYPQG---------RMSHHFREMRVGDYLAVKGP--------KGRFRYQPGQ--------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G  VI+PYTP T D D G+ +LVIK+Y +G         +MS +   ++VGD +  +GP        KG F  QP +         +  GM AGG+GITPM Q+ RAIL+ P D T+  L++AN T +DI+L+E+L+   A+YP++F +++ L+ PP
Sbjct:   91 GSLVIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKVGDVVEFRGPSGLLTYTGKGHFNIQPNKKSPPEPRVAKKLGMIAGGTGITPMLQLIRAILKVPEDPTQCFLLFANQTEKDIILREDLEELQARYPNRFKLWFTLDHPP 247          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: NB5R1_BOVIN (NADH-cytochrome b5 reductase 1 OS=Bos taurus GN=CYB5R1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26
Identity = 62/157 (39.49%), Postives = 95/157 (60.51%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDVGHFELVIKMYPQG---------RMSHHFREMRVGDYLAVKGP--------KGRFRYQPGQ--------VRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPP 699
            G  VI+PYTP T D D G+ +LVIK+Y +G         +MS +   +++GD +  +GP        KG+F  QP +         R  GM AGG+GITPM Q+ RAIL++P D T+  L++AN T +DI+L+E+L+   A++P +F +++ L+ PP
Sbjct:   91 GSLVIRPYTPVTSDEDQGYVDLVIKVYLKGVHPKFPEGGKMSQYLDSLKIGDVVEFRGPSGLLTYAGKGKFNIQPNKKAPPEARVARNLGMIAGGTGITPMLQLIRAILKDPEDPTQCFLLFANQTEKDIILREDLEELQARHPGRFKLWFTLDHPP 247          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: YMI7_YEAST (Uncharacterized oxidoreductase YML087C OS=Saccharomyces cerevisiae GN=YML087C PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26
Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 1
Query:  304 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQP 696
            GE +++ YTP  + +  GH ELV+K Y  G +S +F ++++  Y+  KGP G   Y        G+ AGGSGITP+ QV + I+ +P D T + LIYAN T +DIL+K +LD  A +YP  F ++YV+++P
Sbjct:  117 GERLVRYYTPVNVPNTEGHLELVVKTYKHGVVSKYFDKLKIRQYVEFKGPLGELEYDQDTATELGIIAGGSGITPVLQVLQEIIPSPEDLTHISLIYANETEDDILMKSQLDHMAKEYP-HFKVHYVIHKP 246          
BLAST of FC929955 vs. ExPASy Swiss-Prot
Match: MCR1_PICST (NADH-cytochrome b5 reductase 2 OS=Pichia stipitis GN=MCR1 PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26
Identity = 53/131 (40.46%), Postives = 85/131 (64.89%), Query Frame = 1
Query:  301 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQ 693
            +G  VI+PYTP +     G  + V+K Y  G+MS H  +++  D L+ KGP  +++++P Q ++  +  GG+GITP++Q+   I +NP DKT+V L Y + T +DIL+K+ELD  AAK+ DQ  I Y +++
Sbjct:   96 KGSNVIRPYTPVSDTEQAGTIDFVVKKYEGGKMSSHIHDLKPNDTLSFKGPFVKWKWEPNQFKSIALIGGGTGITPLYQLIHEITKNPADKTQVSLFYGSQTPDDILIKKELDALAAKHKDQVKIVYFVDK 226          
The following BLAST results are available for this feature:
BLAST of FC929955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
MCR1_ASPFU1.694e-2743.70NADH-cytochrome b5 reductase 2 OS=Aspergillus fumi... [more]
MCR1_NEOFI2.212e-2744.19NADH-cytochrome b5 reductase 2 OS=Neosartorya fisc... [more]
MCR1_NEUCR2.890e-2743.41NADH-cytochrome b5 reductase 2 OS=Neurospora crass... [more]
MCR1_CHAGB4.929e-2745.74NADH-cytochrome b5 reductase 2 OS=Chaetomium globo... [more]
MCR1_PHANO6.437e-2743.41NADH-cytochrome b5 reductase 2 OS=Phaeosphaeria no... [more]
MCR1_MAGGR1.098e-2644.19NADH-cytochrome b5 reductase 2 OS=Magnaporthe gris... [more]
NB5R1_HUMAN1.873e-2640.13NADH-cytochrome b5 reductase 1 OS=Homo sapiens GN=... [more]
NB5R1_BOVIN1.873e-2639.49NADH-cytochrome b5 reductase 1 OS=Bos taurus GN=CY... [more]
YMI7_YEAST2.446e-2641.98Uncharacterized oxidoreductase YML087C OS=Saccharo... [more]
MCR1_PICST2.446e-2640.46NADH-cytochrome b5 reductase 2 OS=Pichia stipitis ... [more]

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Properties
Property NameValue
Genbank descriptionC34002C03EF PostHarvC1 Citrus clementina cDNA clone C34002C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929955 ID=FC929955; Name=FC929955; organism=Citrus clementina; type=EST; length=701bp
GAGAGCACCAGAAGATAAGAAATGGAATAAACCGCACACTATTTTCTCTC
CCACCCATTTACTGGTTCCATTTCTTGTTTTGATTTTTGAGTTAAAAATT
TATTCTCTATATACATATATTGATAAATCCGAGGCTTTTAGTTCTTCTAT
TGGTGAGCTTTTCTGTATCATCATGGATATGGAATATCTGCAGAACTTAG
ATGTTCAGCTTCTCGTTGGTGGAGCTGTGGCTGTTTTGGCCATTGCTGTT
GGTGCTGCTTACTTGTATTCCTCTAAGAAGCCCAAAGGGGCAAGGATAGT
CAGGGTGAAGAGGTTATTAAACCATATACCCCAACCACATTGGATTCTGA
TGTTGGTCATTTTGAATTGGTTATTAAGATGTACCCCCAAGGAAGGATGT
CACACCATTTCCGTGAGATGCGTGTTGGTGATTATCTTGCCGTGAAGGGA
CCCAAGGGTCGATTCAGGTATCAACCTGGCCAGGTCAGAGCATTTGGGAT
GACTGCAGGAGGTTCTGGCATCACTCCAATGTTCCAAGTTACTAGAGCCA
TATTAGAGAACCCAAATGACAAGACAAAGGTGCACCTCATTTATGCCAAT
GTTACATATGAGGACATTCTTTTAAAGGAAGAATTGGATGGATTTGCGGC
GAAGTACCCTGATCAATTCACAATCTACTATGTGTTGAATCAGCCTCCTG
A
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