FC929956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: STHA_VIBCH (Soluble pyridine nucleotide transhydrogenase OS=Vibrio cholerae GN=sthA PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 46/166 (27.71%), Postives = 71/166 (42.77%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AA+ + G IEK ++GG C + G IPSKAL H+ E +S SS+ +++ + TR +G + +N+ T + G FI V+V +G +IATGS + RI S L L P+ +++ GAG Sbjct: 21 AAMGLTKGGKNVAIIEKESSVGGGCTHWGTIPSKALRHAVSRIIE-FNSNPLFCKNNSSIHATFSTILSHAKSVIDKQTRLRQGFYDRNQCTLIFGAAHFIDAHTVAVKKADGSIDTYSADKFVIATGSRPYHPKDVDFGHPRIYDSDSILNLEHDPRHIIIYGAG 185
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: STHA_VIBC3 (Soluble pyridine nucleotide transhydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sthA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 46/166 (27.71%), Postives = 71/166 (42.77%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AA+ + G IEK ++GG C + G IPSKAL H+ E +S SS+ +++ + TR +G + +N+ T + G FI V+V +G +IATGS + RI S L L P+ +++ GAG Sbjct: 21 AAMGLTKGGKNVAIIEKESSVGGGCTHWGTIPSKALRHAVSRIIE-FNSNPLFCKNNSSIHATFSTILSHAKSVIDKQTRLRQGFYDRNQCTLIFGAAHFIDAHTVAVKKADGSIDTYSADKFVIATGSRPYHPKDVDFGHPRIYDSDSILNLEHDPRHIIIYGAG 185
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: STHA_ERWCT (Soluble pyridine nucleotide transhydrogenase OS=Erwinia carotovora subsp. atroseptica GN=sthA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 48/170 (28.24%), Postives = 79/170 (46.47%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHE----AMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AA+ A+ G K IE+ +GG C + G IPSKAL H+ E ++S S ++ S ++ + D + TR +G +++N+ G FI ++V + + + NIIIATGS + + RI S L L+ P+ +++ GAG Sbjct: 23 AAMGLAKHGAKIAVIERHYNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDNSRIIRSSFSDI-----LRHADSVIGQQTRMRQGFYERNQCELFSGEASFIDAHTIAVHYPDNTHETLTAANIIIATGSRPYHPAEVDFNHPRIYDSDSILQLDHEPQHVIIYGAG 187
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: STHA_COLP3 (Soluble pyridine nucleotide transhydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=sthA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.761e-11 Identity = 44/166 (26.51%), Postives = 73/166 (43.98%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AA+ A+ K IE+ +GG C + G IPSKAL S E +S ++ +++ + G + +N+V +++G FI +S+ +G + K I+IATGS I D R+ S L+L P+ +++ GAG Sbjct: 21 AAMNLAKRQKKVAIIERYHQVGGGCTHWGTIPSKALRQSVSRLIE-YNSNPLFNQNEQVKQLTFQDILSHASAVIQKQVSLRSGFYNRNRVEHIQGQASFIDAHTISISHPDGSVEKISAKQIMIATGSRPYRPDDIDFDHPRVYDSDSILSLKHAPQHVIIYGAG 185 The following BLAST results are available for this feature:
BLAST of FC929956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929956 ID=FC929956; Name=FC929956; organism=Citrus clementina; type=EST; length=718bpback to top |