FC929956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_STAAR (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=pdhD PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.814e-32 Identity = 84/167 (50.30%), Postives = 103/167 (61.68%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAGY 718 AAI+AAQLG K T +EK G LGG CLNVGCIPSKALLH+SH + EA HS + GV SV ++ + K V+ LT G+EGL K NKV VKG F+ + + V + T KN IIATGS +P KR++ STGAL L EVP +LVV+G GY Sbjct: 24 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALLHASHRFVEAQHS-ENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQT-YNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGY 186
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_STAAN (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain N315) GN=pdhD PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.814e-32 Identity = 84/167 (50.30%), Postives = 103/167 (61.68%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAGY 718 AAI+AAQLG K T +EK G LGG CLNVGCIPSKALLH+SH + EA HS + GV SV ++ + K V+ LT G+EGL K NKV VKG F+ + + V + T KN IIATGS +P KR++ STGAL L EVP +LVV+G GY Sbjct: 24 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALLHASHRFVEAQHS-ENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQT-YNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGY 186
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_STAAM (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=pdhD PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.814e-32 Identity = 84/167 (50.30%), Postives = 103/167 (61.68%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAGY 718 AAI+AAQLG K T +EK G LGG CLNVGCIPSKALLH+SH + EA HS + GV SV ++ + K V+ LT G+EGL K NKV VKG F+ + + V + T KN IIATGS +P KR++ STGAL L EVP +LVV+G GY Sbjct: 24 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALLHASHRFVEAQHS-ENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQT-YNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGY 186
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_STAAC (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain COL) GN=pdhD PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.814e-32 Identity = 84/167 (50.30%), Postives = 103/167 (61.68%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAGY 718 AAI+AAQLG K T +EK G LGG CLNVGCIPSKALLH+SH + EA HS + GV SV ++ + K V+ LT G+EGL K NKV VKG F+ + + V + T KN IIATGS +P KR++ STGAL L EVP +LVV+G GY Sbjct: 24 AAIRAAQLGQKVTIVEK-GNLGGVCLNVGCIPSKALLHASHRFVEAQHS-ENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQT-YNFKNAIIATGSRPIEIPNFKFG-KRVIDSTGALNLQEVPGKLVVVGGGY 186
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH1_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=pdhD PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.042e-32 Identity = 83/167 (49.70%), Postives = 100/167 (59.88%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAGY 718 AAI+AAQLG K T +EK LGG CLNVGCIPSKAL+++ H Y A HS G+ +V VD + K V+ LT G+ GL K NKV VKG F+ + V V T KN IIATGS LP E R+++STGALAL E+PK+LVVIG GY Sbjct: 24 AAIRAAQLGQKVTVVEK-ATLGGVCLNVGCIPSKALINAGHRYENAKHS-DDMGITAENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVVKGEAYFVDSNSVRVMDENSAQTYT-FKNAIIATGSRPIELPNFKYSE-RVLNSTGALALKEIPKKLVVIGGGY 186
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_VIBCH (Dihydrolipoyl dehydrogenase OS=Vibrio cholerae GN=lpd PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.176e-31 Identity = 75/166 (45.18%), Postives = 99/166 (59.64%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AA + A LGL T IE+ LGG CLNVGCIPSKALLH + + EA + HG+ F + D+ + K+K ++ LT G+ G+ K KV V GYG+F P+ + VD E G TVV N I+A GS LP I ++ RI ST AL L EVP +L+++G G Sbjct: 21 AAFRCADLGLDTVIIERYNTLGGVCLNVGCIPSKALLHVAKVIEEA-KALTEHGIVFGEPKTDIDKVRLWKEKVINQLTGGLAGMAKMRKVNVVNGYGKFTGPNTIEVDG-EEGKTVVTFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLLIMGGG 184
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_CHLMU (Dihydrolipoyl dehydrogenase OS=Chlamydia muridarum GN=lpdA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.622e-31 Identity = 73/168 (43.45%), Postives = 108/168 (64.29%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEK--RIVSSTGALALNEVPKELVVIGAG 715 AAI AAQ GLKT IE+R A GGTCLN GCIPSKALL S+ + + H+ G+ + +D PAM+ +KD V ++ G+ GL + NK+T G G IS +EV + + +V+K ++II+ATGS+ ++ PG+ ++ RI+ STG L L E+P+++ +IG G Sbjct: 19 AAITAAQAGLKTALIEEREA-GGTCLNRGCIPSKALLASAEIVAQIRHA-DQFGIHINGFSIDYPAMVQRKDTVVRSIRDGLNGLIRSNKITVFSGRGSLISSTEVKI--LGETPSVIKAQSIILATGSEPRAFPGVPFSQQSPRILCSTGVLNLKEIPQKMAIIGGG 182
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_SHIFL (Dihydrolipoyl dehydrogenase OS=Shigella flexneri GN=lpdA PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 73/166 (43.98%), Postives = 99/166 (59.64%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AA + A LGL+T +E+ LGG CLNVGCIPSKALLH + + EA + A HG+ F + D+ + K+K ++ LT G+ G+ K KV V G G+F + + V+ E G TV+ N IIA GS LP I ++ RI ST AL L EVP+ L+V+G G Sbjct: 21 AAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEA-KALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEG-ENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGG 184
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_ECOLI (Dihydrolipoyl dehydrogenase OS=Escherichia coli (strain K12) GN=lpdA PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 73/166 (43.98%), Postives = 99/166 (59.64%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AA + A LGL+T +E+ LGG CLNVGCIPSKALLH + + EA + A HG+ F + D+ + K+K ++ LT G+ G+ K KV V G G+F + + V+ E G TV+ N IIA GS LP I ++ RI ST AL L EVP+ L+V+G G Sbjct: 21 AAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEA-KALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEG-ENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGG 184
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_ECOL6 (Dihydrolipoyl dehydrogenase OS=Escherichia coli O6 GN=lpdA PE=3 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 73/166 (43.98%), Postives = 99/166 (59.64%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AA + A LGL+T +E+ LGG CLNVGCIPSKALLH + + EA + A HG+ F + D+ + K+K ++ LT G+ G+ K KV V G G+F + + V+ E G TV+ N IIA GS LP I ++ RI ST AL L EVP+ L+V+G G Sbjct: 21 AAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEA-KALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEG-ENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGG 184 The following BLAST results are available for this feature:
BLAST of FC929956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929956 ID=FC929956; Name=FC929956; organism=Citrus clementina; type=EST; length=718bpback to top |