FC929956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_BUCBP (Dihydrolipoyl dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=lpdA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.978e-23 Identity = 59/166 (35.54%), Postives = 96/166 (57.83%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AA + + LGL IE+ +LGG CLNVGCIPSK LLH + + + + + G+ F ++++L + + K + + + GI L +K V + GY +F+ + + V E + VV I+IATGS K L I D+ RI +S+ A+++ +PK+L++IG G Sbjct: 22 AAFRCSDLGLNVVLIEQYYSLGGVCLNVGCIPSKYLLHIAKVIKD-VKKLSRIGISFEKLDINLKEIQCNQKKIIESFSSGISNLARKRNVRIIFGYAKFLDANSIFVQG-EHDSYVVSFNKIVIATGSLSKKLSYIPYDDIRIWNSSFAVSIPSIPKKLLIIGGG 185
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_MYCLE (Dihydrolipoyl dehydrogenase OS=Mycobacterium leprae GN=lpd PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.103e-21 Identity = 62/169 (36.69%), Postives = 89/169 (52.66%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTV---VKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AAI+AAQLGL T +E + GG CLNVGCIPSK LLH++ + H + G+ D + K G+ L KKNK+T + GYG F + +SV+ EG V N+IIATGS + +PG T+ +++ + E+P +V++GAG Sbjct: 18 AAIRAAQLGLSTAVVEPK-YWGGICLNVGCIPSKVLLHNAELAHIFTKEAKTFGIS-GDASFDYGIAYDRSRKVSEGRVAGVHFLMKKNKITEIHGYGRFTDANTLSVELSEGVPETPLKVTFNNVIIATGSKTRLVPG-TLLSTNVITYEEQILTRELPDSIVIVGAG 183
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: IRC15_YEAST (Increased recombination centers protein 15 OS=Saccharomyces cerevisiae GN=IRC15 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20 Identity = 55/168 (32.74%), Postives = 86/168 (51.19%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYH--EAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AA++A+Q GL T C+++R +LGG L G +PSK LL+ S++Y + G + + D+ A + + L + KN VT KG F P V + +V+ K I++ATGS V PG+ ID +I+SS AL+L+ +P ++G G Sbjct: 32 AAMQASQAGLLTACVDQRASLGGAYLVDGAVPSKTLLYESYLYRLLQQQELIEQRGTRLFPAKFDMQAAQSALKHNIEELGNVYKRELSKNNVTVYKGTAAFKDPHHVEIAQRGMKPFIVEAKYIVVATGSAVIQCPGVAIDNDKIISSDKALSLDYIPSRFTIMGGG 199
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_ACHLA (Dihydrolipoyl dehydrogenase (Fragment) OS=Acholeplasma laidlawii GN=pdhD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.717e-20 Identity = 66/171 (38.60%), Postives = 94/171 (54.97%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGI--TIDEKRIVSSTGALALNEVPKELVVIGAG 715 AAIKAAQ G K +EK +GG CLN GCIP+K L S+ +++ S GV S V D ++++KD V LT G+ L KKN V G+G+ S +EV V+ +K KN+IIATGS V +PG+ ++ +V+S L + PK +V++G G Sbjct: 19 AAIKAAQYGAKVALVEKE-VVGGICLNHGCIPTKTFLKSAKVFNTVKKSM-DFGVSTSGEVGFDWSKIVSRKDGVVKQLTNGVAFLLKKNGVDVYNGFGDIKSANEVVVN-----GESLKTKNVIIATGSSAVVPPIPGVKEAYEKGIVVTSRELLNVKNYPKSIVIVGGG 182
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: DLDH_SYNY3 (Dihydrolipoyl dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=lpdA PE=1 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 60/171 (35.09%), Postives = 91/171 (53.22%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHS--FASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSVDTIEGGNT--VVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAGY 718 AA+ A + GLKT IE + +GGTC+N GCIPSKALL +S E G++ + V A+ A + VS + + + KV ++G+G+ P EV T+ G N ++K K I++ GS PGI ID K + +S A+ L +P+ + +IG+GY Sbjct: 21 AALHAVKCGLKTAIIEAKD-MGGTCVNRGCIPSKALLAASGRVREMSDQDHLQQLGIQINGVTFTREAIAAHANDLVSKIQSDLTNSLTRLKVDTIRGWGKVSGPQEV---TVIGDNETRILKAKEIMLCPGSVPFVPPGIEIDHKTVFTSDEAVKLETLPQWIAIIGSGY 187
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: MERA_PSEAE (Mercuric reductase OS=Pseudomonas aeruginosa GN=merA PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 60/169 (35.50%), Postives = 91/169 (53.85%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRG-IEGLFKKN-KVTYVKGYGEFISPSEVSVDTIEGGNTVVKGKNIIIATGSD--VKSLPGITIDEKRIVSSTGALALNEVPKELVVIGA 712 AA+KA + G + T IE RG +GGTC+NVGC+PSK ++ ++H+ H S G+ + +D ++AQ+ V L EG+ N +T V G F ++V EGG VV ++ATG+ V +PG + E +ST ALA + +P+ L VIG+ Sbjct: 113 AALKAVEQGAQVTLIE-RGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPPIPG--LKESPYWTSTEALASDTIPERLAVIGS 278
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: STHA_MYCTU (Probable soluble pyridine nucleotide transhydrogenase OS=Mycobacterium tuberculosis GN=sthA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 56/168 (33.33%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AAI +A+LG +E+ LGG C+N G IPSK L + +Y M+ +G + + PA ++A+ + + +N+V + G+G FI P + V D T V G IIIATG+ G+ DE+R++ S G L L +P +VV+GAG Sbjct: 18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKTL-REAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAG 184
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: STHA_MYCTA (Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=sthA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 56/168 (33.33%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AAI +A+LG +E+ LGG C+N G IPSK L + +Y M+ +G + + PA ++A+ + + +N+V + G+G FI P + V D T V G IIIATG+ G+ DE+R++ S G L L +P +VV+GAG Sbjct: 18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKTL-REAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAG 184
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: STHA_MYCBT (Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=sthA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 56/168 (33.33%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AAI +A+LG +E+ LGG C+N G IPSK L + +Y M+ +G + + PA ++A+ + + +N+V + G+G FI P + V D T V G IIIATG+ G+ DE+R++ S G L L +P +VV+GAG Sbjct: 18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKTL-REAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAG 184
BLAST of FC929956 vs. ExPASy Swiss-Prot
Match: STHA_MYCBP (Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=sthA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 56/168 (33.33%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 218 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPA-MMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGEFISPSEVSV-DTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKELVVIGAG 715 AAI +A+LG +E+ LGG C+N G IPSK L + +Y M+ +G + + PA ++A+ + + +N+V + G+G FI P + V D T V G IIIATG+ G+ DE+R++ S G L L +P +VV+GAG Sbjct: 18 AAIASAKLGKSVAIVERGRMLGGVCVNTGTIPSKTL-REAVLYLTGMNQRELYGASYRVKDRITPADLLARTQHVIGKEVDVVRNQLMRNRVDLIVGHGRFIDPHTILVEDQARREKTTVTGDYIIIATGTRPARPSGVEFDEERVLDSDGILDLKSLPSSMVVVGAG 184 The following BLAST results are available for this feature:
BLAST of FC929956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 164
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929956 ID=FC929956; Name=FC929956; organism=Citrus clementina; type=EST; length=718bpback to top |