FC929962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACDC_BACSU (Probable acyl-CoA dehydrogenase yngJ OS=Bacillus subtilis GN=yngJ PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.249e-25 Identity = 65/166 (39.16%), Postives = 90/166 (54.22%), Query Frame = 1 Query: 160 QLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 657 Q +E V FA++ IAP A +DQ+ FP +K MG L GI P+E + +A+EE+ +A GS GLSY A +L + L G+ QK +L L SG +G+ ++EPNAGSD G + KA Y+ING K W TN A+T++V A T Sbjct: 9 QQMVREMVKDFAKKEIAPHAEHVDQTGEFPMQT--FKKMGELGLMGIPFPEEYGGSGGDTISYALAVEEVGKACGSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTALGSFGLTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNASYARTVIVTAVT 172
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACDA_BACSU (Acyl-CoA dehydrogenase OS=Bacillus subtilis GN=acdA PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.249e-25 Identity = 63/175 (36.00%), Postives = 100/175 (57.14%), Query Frame = 1 Query: 172 KESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 ++ V FA+ +AP AA+ D+ F D L++ M N L GI P++ + IA+EE+S+ S G++ AH +LC L G+ QK +YL +L GE +GA A++E +GSD MK A+R+ Y++NG+K++ TNG VA +V+A TD + ++ + FI Sbjct: 13 RKLVRDFAKHEVAPTAAERDEQERF--DRELFREMANLGLTGIPWPEDYGGIGSDYLAYVIAVEELSKVCASTGVTLSAHISLCSWPLFAFGTEEQKTEYLTQLALGEKIGAFALTEAGSGSDAGSMKTTAERIGDDYVLNGSKVFITNGGVADIYIVFAVTDPEKKKKGVTAFI 185
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: FADE_BACSU (Probable acyl-CoA dehydrogenase OS=Bacillus subtilis GN=fadE PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.379e-22 Identity = 65/190 (34.21%), Postives = 90/190 (47.37%), Query Frame = 1 Query: 148 FDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFIEKGMP 711 F D ++ + +++ P I+ ++ F V L K G L G P+E + E+ SRA GS LSYGAH + +V GS QK KYLP L SGE + A A++EP +GSD +G K A + G Y++ G K W TN A VVYAK D + + +EK P Sbjct: 30 FTDEHKMIAKTTEDYIEQDVLPHIDDIE-NHQFEHSVRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRA-GSFSLSYGAHVGIGSLPIVFFGSEEQKKKYLPGLASGEKIAAYALTEPGSGSDALGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAKVD---GDKFSAFIVEKEFP 214
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADS_PONAB (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADS PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.094e-21 Identity = 58/186 (31.18%), Postives = 90/186 (48.39%), Query Frame = 1 Query: 139 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 S+ +T ++ FA + + P AA++D+ + FP K MG L + P+E + IAMEEISR S G+ +++L + +++ GS QK K++ SG+ +G A+SEP GSD A +++NG K W TN A VV+A TD L + S F+ Sbjct: 31 SVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFP--AAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFL 214
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADS_BOVIN (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADS PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.264e-21 Identity = 58/187 (31.02%), Postives = 95/187 (50.80%), Query Frame = 1 Query: 139 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDG-GYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 S+ +T +++ FA + + P AA++D+ + FP K MG L + P+E + IAMEEISR S G+ +++L + +++ G+ QK +++ SG+ +G A+SEP GSD G R DG ++++G K W TN A +VV+A TD L + S F+ Sbjct: 31 SVELPETHQMLRQTCRDFAEKELFPIAAQVDKEHRFP--AAQVKKMGELGLMAMNVPEELSGAGLDYLAYSIAMEEISRGCASTGVIMSVNNSLYLGPILKFGTKEQKQQWVAPFTSGDKIGCFALSEPGNGSD-AGAAATTARADGDSWVLSGTKAWITNAWEASAVVVFASTDRSLHNKGISAFL 214
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADS_PIG (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADS PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.210e-20 Identity = 57/186 (30.65%), Postives = 91/186 (48.92%), Query Frame = 1 Query: 139 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 S+ +T +++ FA + + P AA++D+ + FP+ K MG L + P+E + IAMEEISR S G+ ++ L + +++ GS QK +++ SG+ VG A+SEP GSD A ++++G K W TN A VV+A TD L + S F+ Sbjct: 31 SVELPETYQMLRQTCRDFAEKELVPIAAQVDKEHRFPEAQV--KKMGELGLMAMDVPEELSGAGLDYLAYTIAMEEISRGCASTGVIMSVNNFLYLGPILKFGSKEQKQQWITPFTSGDKVGCFALSEPGNGSDAGAAATTAQADHDSWVLSGTKAWITNAWEASAAVVFASTDRSLQNKGISAFL 214
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADS_MOUSE (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acads PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.696e-20 Identity = 55/186 (29.57%), Postives = 91/186 (48.92%), Query Frame = 1 Query: 139 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 S+ +T +++ FA + + P AA++D+ + FP K MG L + P+E + IA+EEISRA S G+ +++L + +++ GS QK +++ +G+ +G A+SEP GSD A +++NG K W TN A VV+A TD + S F+ Sbjct: 31 SVELPETHQMLRQTCRDFAEKELVPIAAQLDREHLFP--TAQVKKMGELGLLAMDVPEELSGAGLGYLAYSIALEEISRACASTGVIMSVNNSLYLGPILKFGSAQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFL 214
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADS_RAT (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acads PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20 Identity = 54/186 (29.03%), Postives = 91/186 (48.92%), Query Frame = 1 Query: 139 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 S+ +T +++ FA + + P AA++D+ + FP + K MG L + P+E + IA+EEISR S G+ +++L + +++ GS QK +++ +G+ +G A+SEP GSD A +++NG K W TN A VV+A TD + S F+ Sbjct: 31 SVELPETHQMLRQTCRDFAEKELVPIAAQLDKEHLFP--TSQVKKMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRGCASTGVIMSVNNSLYLGPILKFGSSQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFASTDRSRQNKGISAFL 214
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADS_HUMAN (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADS PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20 Identity = 57/186 (30.65%), Postives = 89/186 (47.85%), Query Frame = 1 Query: 139 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 S+ +T ++ FA + + P AA++D+ + FP K MG L + P+E + IAMEEISR S G+ +++L + +++ GS QK ++ SG+ +G A+SEP GSD A +++NG K W TN A VV+A TD L + S F+ Sbjct: 31 SVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFP--AAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFL 214
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACDSB_MOUSE (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadsb PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.747e-19 Identity = 57/196 (29.08%), Postives = 102/196 (52.04%), Query Frame = 1 Query: 115 HSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFN--LHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 ++ AF+ L D+ ++ K++V +FA+E++AP + +D+++ + V + G F L GI + + +EE+++ SV L + + N +H S QK YLPKL++ E +G+ +SE AGSD MK +AD+ Y++NG+KMW ++ A+ +V+A D R + F+ Sbjct: 47 NAVAFAPLQTLTDE-EIMMKQTVKKFAQEHVAPLVSSMDENSKMEKSV----IQGLFQQGLMGIEVEAQYGGTEASFFCSVLVIEELAKVDASVALLCDIQNTIINNLFRKHASEEQKATYLPKLVT-EKLGSFCLSEAGAGSDSFAMKTRADKSGNYYVLNGSKMWISHAEHAELFLVFANVDPSSGYRGITCFL 236 The following BLAST results are available for this feature:
BLAST of FC929962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929962 ID=FC929962; Name=FC929962; organism=Citrus clementina; type=EST; length=714bpback to top |