FC929962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADM_DROME (Probable medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Drosophila melanogaster GN=CG12262 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19 Identity = 63/180 (35.00%), Postives = 92/180 (51.11%), Query Frame = 1 Query: 130 SSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAH-SNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 660 + TS + QLQ +E +F RE I P AA+ D+S +P + W+L G N H P + C++ EE+ A G G+ S L ++ G+ QK KYL +L+ V A ++EP AGSDV G+K +A++ ++ING KMW TNG VA V A+T+ Sbjct: 31 NGTSFALTEDQLQLQELARKFTREEIIPVAAQYDKSGEYPWPIIKKAWEL-GLMNNH---IPADIGGLDLDVFTTCLSAEEL--AYGCTGIMTALEASGLGQTPVILSGNKEQKKKYLGRLLEEPLVAAYCVTEPGAGSDVSGIKTRAEKKGDEWVINGQKMWITNGGVANWYFVLARTN 204
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACAD9_HUMAN (Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo sapiens GN=ACAD9 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.282e-19 Identity = 65/200 (32.50%), Postives = 98/200 (49.00%), Query Frame = 1 Query: 76 RSLCASFFTKKQKHSAAFSSTSLLFDDTQL--QFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDG--GYIINGNKMWCTNGPVAQTLVVYAKTDI 663 R+ F K K F + D+ QF V +F E + R KIDQ P D L KL + L G+ P+E + + EI GS+ ++ AH + + ++ G+ QK KYLPKL SGEH+ A ++EP +GSD ++ +A + YI+NG+K+W TNG +A V+AKT++ Sbjct: 37 RAFAKELFLGKIKKKEVFPFPEVSQDELNEINQFLGPVEKFFTEEVDSR--KIDQEGKIP-DETLEKLK-SLGLFGLQVPEEYGGLGFSNTMYS-RLGEIISMDGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEV 231
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACDSB_RAT (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadsb PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.671e-19 Identity = 59/186 (31.72%), Postives = 97/186 (52.15%), Query Frame = 1 Query: 148 FDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFN--LHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVR-HGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 F D + +++V +FA+E IAP + +D+++ + V + G F + GI + + +EE+++ SV L N IN+L R HG+ QK YLPKL++ E +G+ +SE AGSD +K +AD+ Y+ING+KMW +N A+ +V+A D R + F+ Sbjct: 57 FTDEDIMMQKAVKKFAQEQIAPLVSTMDENSKMEKSV----IQGLFQQGMMGIEVEAKYGGTEASFLCSVLVIEELAKVDASVALLCDIQ-NTVINKLFRKHGTEEQKATYLPKLVT-EKLGSFCLSEAGAGSDSFALKTRADKSGNYYVINGSKMWISNAEHAELFLVFANVDPPSGYRGITCFL 236
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACDSB_BOVIN (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADSB PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.671e-19 Identity = 57/188 (30.32%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 148 FDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFN--LHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFIEKG 705 F D ++ K +V +FA+E +AP +K+D+ + + V + G F L GI + + +EE+++ SV L + L + ++G+ QK YLPKL + E ++ +SE AGSD MK +AD+ YIING+KMW ++ +A VV A D + + F+ G Sbjct: 57 FTDEEMMIKSAVKKFAQEQVAPFVSKMDEDSKMEKSV----IQGLFQQGLMGIEIDTKYGGTGASFFSSVLVIEELAKVDASVALVCDIQNTLINRMIGKYGTEEQKATYLPKLAT-EKASSICISETGAGSDSFAMKTRADKKGDYYIINGSKMWISSAEIAGLFVVMANADFSAGYKGITCFLVDG 239
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADL_MOUSE (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadl PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.479e-18 Identity = 52/183 (28.42%), Postives = 98/183 (53.55%), Query Frame = 1 Query: 169 FKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSI---FIEKGM 708 F+ESV +F +E + P + +++ ++V W+ G L GI ++ + EE S G + HS++ + + +G+ Q +K++P++ +G+ +GA+AM+EP AGSD+ G++ A R +I+NG+K++ TNG ++ ++V A T+ + H I +E GM Sbjct: 60 FRESVRKFFQEEVIPHHTEWEKAGEVSREV--WEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEE-QAYSNCTGPGFSLHSDIVMPYIANYGTKEQIEKFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKRSGSDWILNGSKVFITNGWLSDLVIVVAVTNREARSPAHGISLFLVENGM 239
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACDSB_PONAB (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADSB PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.304e-18 Identity = 59/186 (31.72%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 148 FDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFN--LHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVR-HGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 F D ++ K SV +FA+E IAP + +D+++ + V + G F L GI E + +EE+++ SV + + N IN L+R HG+ QK YLP+L + E VG+ +SE AGSD +K +AD+ Y++NG+KMW ++ A +V A D + + + F+ Sbjct: 57 FTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSV----IQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAV-FCEIQNTLINTLIRKHGTEEQKGTYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFL 236
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADL_HUMAN (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADL PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.304e-18 Identity = 51/183 (27.87%), Postives = 99/183 (54.10%), Query Frame = 1 Query: 169 FKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSI---FIEKGM 708 F++SV +F +E + P ++ +++ ++V W+ G L G+ + I EE + ++ S G + HS + ++ + HGS Q ++P++ +G+ +GA+AM+EP AGSD+ G+K A + +I+NG+K++ +NG ++ ++V A T+ + H I +E GM Sbjct: 60 FRKSVRKFFQEEVIPHHSEWEKAGEVSREV--WEKAGKQGLLGVNIAEHLGGIGGDLYSAAIVWEEQAYSNCS-GPGFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGSDLQGIKTNAKKDGSDWILNGSKVFISNGSLSDVVIVVAVTNHEAPSPAHGISLFLVENGM 239
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACDSB_HUMAN (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADSB PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18 Identity = 59/186 (31.72%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 148 FDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFN--LHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVR-HGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSIFI 696 F D ++ K SV +FA+E IAP + +D+++ + V + G F L GI E + +EE+++ SV + + N IN L+R HG+ QK YLP+L + E VG+ +SE AGSD +K +AD+ Y++NG+KMW ++ A +V A D + + + F+ Sbjct: 57 FTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSV----IQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAV-FCEIQNTLINTLIRKHGTEEQKATYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFL 236
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADL_PIG (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADL PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18 Identity = 53/183 (28.96%), Postives = 96/183 (52.46%), Query Frame = 1 Query: 169 FKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSI---FIEKGM 708 F+ESV +F +E + P A+ +++ ++ LW+ G L GI + I EE S G + HS++ + + +GS Q ++P++ +G+ +GA+AM+EP AGSD+ G++ A + +I+NG+K++ TNG ++ ++V A T+ + H I +E GM Sbjct: 60 FRESVRKFFQEEVIPHHAEWEKAGEVSRE--LWEKAGKQGLLGINIAERHGGIGGDLYSAAIVWEE-QAYSNCTGPGFSLHSDIVMPYIANYGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKKDGSDWILNGSKVFITNGWLSDVVIVVAVTNREARSPAHGISLFLVENGM 239
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADL_RAT (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadl PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18 Identity = 51/183 (27.87%), Postives = 98/183 (53.55%), Query Frame = 1 Query: 169 FKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSI---FIEKGM 708 F+ESV +F +E + P + +++ ++ LW+ G L GI ++ + EE S G + HS++ + + +G+ Q ++++P++ +G+ +GA+AM+EP AGSD+ G++ A R +I+NG+K++ TNG ++ ++V A T+ + H I +E GM Sbjct: 60 FRESVRKFFQEEVIPYHEEWEKAGEVSRE--LWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEE-QAYSNCTGPGFSLHSDIVMPYIANYGTKEQIEQFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKRSGSDWILNGSKVFITNGWLSDLVIVVAVTNREARSPAHGISLFLVENGM 239 The following BLAST results are available for this feature:
BLAST of FC929962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929962 ID=FC929962; Name=FC929962; organism=Citrus clementina; type=EST; length=714bpback to top |