FC929962
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: GCDH_DICDI (Glutaryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=gcdh PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17 Identity = 58/196 (29.59%), Postives = 94/196 (47.96%), Query Frame = 1 Query: 133 STSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVD-GGYIINGNKMWCTNGPVAQTLVVYAKT---DIKLAQRNHSIFIEKGM 708 S L + ++ ++ V +F ++ + PR + F +++ + G + G T P A+E++ S + S+L ++ + G+ AQK KYL L SG+ VG ++EPNAGSD GM+ +A + G Y++NG K W TN P+A VV+AK DI+ +EKGM Sbjct: 44 SLESLLTEEEVMIRDQVNKFCQDELMPRIQMAYRDEKFDREI--MREYGKMGMLGATIPAYGGVSHVAYGLMANAVEKVDSGYRS---AMSVQSSLVMHPINTFGTDAQKSKYLDGLASGDLVGCFGLTEPNAGSDPAGMQTRAVKNSAGNYVLNGTKTWITNSPIADVFVVWAKVENGDIR------GFVLEKGM 228
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADM_MACFA (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADM PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17 Identity = 63/190 (33.16%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 100 TKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 660 TK + S F + Q +F+ + +FARE I P AA+ D++ +P + W+L G N H PQ C+ EE+ A G G+ N L ++ G+ QK KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D Sbjct: 25 TKADRQREPGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWEL-GLMNPH---IPQNCGGLGLGTFDACLISEEL--AYGCTGVQTAIEGNSLGQMPIIIAGNEQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKASWYFLLARSD 208
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACAD9_MOUSE (Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus musculus GN=Acad9 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17 Identity = 57/168 (33.93%), Postives = 88/168 (52.38%), Query Frame = 1 Query: 166 QFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDI 663 QF + +F E + R KIDQ P D L KL + L GI P+E + + EI S+ ++ AH + + ++ G+ QK KYLPKL SGEH+ A ++EP +GSD ++ +A + +I+NG+K+W TNG +A V+AKT++ Sbjct: 73 QFVGPLEKFFTEEVDSR--KIDQEGKIPVDT-LEKLK-SLGLFGIQVPEEYGGLGLSNTMYA-RLGEIISLDASITVTLAAHQAIGLKGIILVGNDEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEV 235
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADM_PANTR (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pan troglodytes GN=ACADM PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 62/190 (32.63%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 100 TKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 660 TK + S F + Q +F+ + +FARE I P AA+ D++ +P + W+L G N H P+ C+ EE+ A G G+ N L ++ G+ QK KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D Sbjct: 25 TKANRQREPGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWEL-GLMNTH---IPENCGGLGLGTFDACLISEEL--AYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSD 208
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADM_HUMAN (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADM PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.635e-17 Identity = 62/190 (32.63%), Postives = 92/190 (48.42%), Query Frame = 1 Query: 100 TKKQKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 660 TK + S F + Q +F+ + +FARE I P AA+ D++ +P + W+L G N H P+ C+ EE+ A G G+ N L ++ G+ QK KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D Sbjct: 25 TKANRQREPGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWEL-GLMNTH---IPENCGGLGLGTFDACLISEEL--AYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSD 208
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADM_BOVIN (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADM PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.758e-17 Identity = 60/180 (33.33%), Postives = 91/180 (50.56%), Query Frame = 1 Query: 130 SSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 660 S S F + Q +F+ + +FARE I P AA+ D++ +P + W+L G N H P+ C+ EE+ A G G+ +N L ++ G+ Q+ KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D Sbjct: 35 SGFSFEFTEQQKEFQATARKFAREEIIPLAAEYDKTGEYPVPLIKRAWEL-GLMNTH---IPESCGGLGLGTFDSCLISEEL--AYGCTGVQTAIEANSLGQMPVIIAGNDQQQKKYLGRMTEEPLMCAYCVTEPVAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSD 208
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADV_HUMAN (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADVL PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17 Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 1 Query: 175 ESVGQFARENIAPRAAKIDQSNSFPQDVNL-------WKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDI 663 E QF +E + P + ++ N ++ L W+ + G+ P E + +E + VG++ GAH ++ ++ G+ AQK+KYLPKL SGE V A ++EP++GSD ++ A G Y +NG+K+W +NG +A V+AKT + Sbjct: 96 EEQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPV 267
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACADM_PIG (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADM PE=1 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 1.060e-16 Identity = 64/199 (32.16%), Postives = 97/199 (48.74%), Query Frame = 1 Query: 91 SFFTKKQKHSAAF------SSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 660 S F + +H+ A S S + Q +F+ + +FARE I P AA+ D++ +P + W+L G N H P+ C+ EE+ A G G+ +N L L+ G+ Q+ KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D Sbjct: 16 SHFGWRSQHTKAVPQCEPGSGFSFELTEQQKEFQATARKFAREEIIPVAAEYDRTGEYPVPLLKRAWEL-GLMNTH---IPESFGGLGLGIIDSCLITEEL--AYGCTGVQTAIEANTLGQVPLIIGGNYQQQKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSD 208
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: IVD_CAEEL (Probable acyl coa dehydrogenase 6 OS=Caenorhabditis elegans GN=acdh-6 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16 Identity = 55/194 (28.35%), Postives = 97/194 (50.00%), Query Frame = 1 Query: 121 AAFSST--SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRAS-GSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT-DIKLAQRNHSI 690 A SST +++D+ + S+ + +E I P A+ ++S +P ++K++G + + P + E+I GS+ +S S++ L + GS + ++++L I+G+ V ++A+SEP+AGSDV ++ A R IING+KMW TNG A V T + K +N S+ Sbjct: 14 ATTSSTVKHMIYDEPHFAMQNSLAKLIKEKINPNVAQWEKSGRYPAHF-VFKMLGQLGVFAVNKPVDYGGTGRDFAMSIAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFLRPSINGDLVSSIAVSEPHAGSDVSAIRTHARRYGSDLIINGSKMWITNGDQADWACVLVNTSNAKNLHKNKSL 206
BLAST of FC929962 vs. ExPASy Swiss-Prot
Match: ACDS_MEGEL (Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera elsdenii PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16 Identity = 46/126 (36.51%), Postives = 76/126 (60.32%), Query Frame = 1 Query: 346 HCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG-YIINGNKMWCTNGPVAQTLVVYAKTDIKLAQRNHSI---FIEKGMP 711 + +A+EE+++ V ++ A +LC N + + G+ AQK+K+L L+ G +GA ++EPNAG+D G + A + D G Y +NG+K++ TNG A +V+A TD ++ NH I +E G P Sbjct: 72 YILAVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTD--KSKGNHGITAFILEDGTP 195 The following BLAST results are available for this feature:
BLAST of FC929962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929962 ID=FC929962; Name=FC929962; organism=Citrus clementina; type=EST; length=714bpback to top |