FC929969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SHEB2 (3-dehydroquinate synthase OS=Shewanella baltica (strain OS223) GN=aroB PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.701e-25 Identity = 57/121 (47.11%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 ++VDLG RSYPIYIG L+ + L +++ K++L+VTN TVAPLYL ++ + + VE+VILPDGE +K++ L +F ++ R VALGGGVIGDM G+AAA Y RG+ Sbjct: 4 IQVDLGVRSYPIYIGQNLMSDGETLSRYLLKKRILIVTNETVAPLYLKQIQETMASFG---EVESVILPDGEQFKDLAHLDTIFTALLQQNYGRDSVLVALGGGVIGDMTGFAAACYQRGI 121
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_MARMS (3-dehydroquinate synthase OS=Marinomonas sp. (strain MWYL1) GN=aroB PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25 Identity = 56/119 (47.06%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 250 VDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 VDL RSYPI+IGSG+ L + GK+V++VTN T+APLYL+ + L+ + V+ ILPDGE YK ++T + +E++ +R T +ALGGGV+GDM G+AAA+Y RGV Sbjct: 6 VDLDDRSYPIFIGSGIRQQKALFDDAIHGKQVMIVTNETIAPLYLESMVSMLS---VDYKVDTCILPDGEVYKTLETYGMIMSALLEAKHNRTTTVIALGGGVVGDMAGFAAATYQRGV 121
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_ESCF3 (3-dehydroquinate synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=aroB PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.528e-25 Identity = 62/121 (51.24%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V LG+RSYPI I +GL + P G++V++VTN T+APLYLDKV L + V V++VILPDGE YK++ L VF ++ R T VALGGGVIGD+ G+AAASY RGV Sbjct: 4 ITVTLGERSYPITIAAGLFNEPASFLPLKSGEQVMLVTNETLAPLYLDKVRGVLEQAG--VIVDSVILPDGEKYKSLTVLDTVFTALLQKPHGRDTTLVALGGGVIGDLTGFAAASYQRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_PHOLL (3-dehydroquinate synthase OS=Photorhabdus luminescens subsp. laumondii GN=aroB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25 Identity = 60/121 (49.59%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V LG+RSYPI I GL D P G++V++VTN T+APLYL KV L + + V+ VILPDGE YK++ L VF +E+ R T +ALGGGVIGD+ G+AAA Y RGV Sbjct: 4 ITVTLGERSYPITIAKGLFDDPSAFAPLKAGQQVMLVTNQTLAPLYLAKVKATLQQAR--IRVDEVILPDGEQYKSLSVLNDVFSALLENSHSRDTTLIALGGGVIGDLTGFAAACYQRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_AZOSE (3-dehydroquinate synthase OS=Azoarcus sp. (strain EbN1) GN=aroB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.607e-25 Identity = 58/121 (47.93%), Postives = 82/121 (67.77%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V LG R+YPI+IG G+LD+ L++ ++ +V +VTN+ V PLYL ++ AL V V V LPDGE++KN TL VFD + +R +R T +ALGGGV+GDM G+AAA+Y RG+ Sbjct: 4 LNVALGDRAYPIHIGPGVLDNAGLIRPFLRTARVAIVTNDVVGPLYLARLQRALEADGVRVDV--VTLPDGESHKNWQTLNLVFDMLLATRCERSTTLIALGGGVVGDMAGFAAATYQRGM 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SHIFL (3-dehydroquinate synthase OS=Shigella flexneri GN=aroB PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.017e-25 Identity = 61/121 (50.41%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V LG+RSYPI I SGL + P G++V++VT+ T+APLYLDKV L + V+V++VILPDGE YK++ L VF ++ R T VALGGGV+GD+ G+AAASY RGV Sbjct: 4 IVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTSETLAPLYLDKVRGVLEQAG--VNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SHIF8 (3-dehydroquinate synthase OS=Shigella flexneri serotype 5b (strain 8401) GN=aroB PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.017e-25 Identity = 61/121 (50.41%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V LG+RSYPI I SGL + P G++V++VT+ T+APLYLDKV L + V+V++VILPDGE YK++ L VF ++ R T VALGGGV+GD+ G+AAASY RGV Sbjct: 4 IVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTSETLAPLYLDKVRGVLEQAG--VNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SHEON (3-dehydroquinate synthase OS=Shewanella oneidensis GN=aroB PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.017e-25 Identity = 56/121 (46.28%), Postives = 79/121 (65.29%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 ++VDLG+RSYPIYIG L+ + L +++ K++L+VTN TVAPLYL +V D + + +VIL DGE +K++ L +F ++ R VALGGGVIGDM G+AAA Y RG+ Sbjct: 5 IQVDLGERSYPIYIGQSLMSDSETLSRYLLKKRILIVTNETVAPLYLKQVQDTMASFG---EISSVILSDGEQFKDLTHLDSIFTALLQRNYGRDSVLVALGGGVIGDMTGFAAACYQRGI 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_NITMU (3-dehydroquinate synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=aroB PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.017e-25 Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 262 QRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKV-TDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 QR YPI+IG+ +L P+L+ ++ K+V +VTN TV PLYL+K D G +V + +LPDGE YKN +TL +FD + R +R +ALGGGV+GD+ G+AAA+YLRGV Sbjct: 14 QRGYPIHIGANILTQPELILDYLDQKRVAIVTNTTVGPLYLEKFRADLSVHGMVSVPI---VLPDGEEYKNWETLNLIFDALLTHRCERNTPLIALGGGVVGDLTGFAAATYLRGV 126
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_ACIAD (3-dehydroquinate synthase OS=Acinetobacter sp. (strain ADP1) GN=aroB PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.859e-25 Identity = 59/121 (48.76%), Postives = 85/121 (70.25%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V+LG R YPI+IGS L + +LL +++G++V++VTN T+ LYL DAL + V+V +LPDGE YKN++ L +FD +++ +R CT +ALGGGVIGDM G+AAAS+ RGV Sbjct: 4 LHVELGDRRYPIFIGSQL-NPQNLLAPYIKGRQVMIVTNTTLEQLYLQHYQDALHALDKQVAV--CVLPDGEKYKNIEHLNLIFDALLKAGFNRDCTVLALGGGVIGDMAGFAAASFQRGV 121 The following BLAST results are available for this feature:
BLAST of FC929969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929969 ID=FC929969; Name=FC929969; organism=Citrus clementina; type=EST; length=607bpback to top |