FC929969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURVG (3-dehydroquinate synthase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=aroB PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.083e-29 Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG R+YPI+IG+GL+ +L H+ G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD + R DR+ T +ALGGGVIGDM G+AAA Y+RGV Sbjct: 4 VNVDLGDRAYPIHIGAGLIGRTELFAPHINGSSVTIVTNTTVDPLYGDALRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLTERADRKTTLIALGGGVIGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURCJ (3-dehydroquinate synthase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=aroB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG R+YPI+IG+GL+ +L H++G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD + DR+ T VALGGGV+GDM G+AAA Y+RGV Sbjct: 4 VNVDLGDRAYPIHIGAGLIGRTELFAPHIKGSSVTIVTNTTVDPLYGDALRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLTDHADRKTTLVALGGGVVGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURCH (3-dehydroquinate synthase OS=Burkholderia cenocepacia (strain HI2424) GN=aroB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG R+YPI+IG+GL+ +L H++G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD + DR+ T VALGGGV+GDM G+AAA Y+RGV Sbjct: 4 VNVDLGDRAYPIHIGAGLIGRTELFAPHIKGSSVTIVTNTTVDPLYGDALRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLTDHADRKTTLVALGGGVVGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURCC (3-dehydroquinate synthase OS=Burkholderia cenocepacia (strain MC0-3) GN=aroB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG R+YPI+IG+GL+ +L H++G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD + DR+ T VALGGGV+GDM G+AAA Y+RGV Sbjct: 4 VNVDLGDRAYPIHIGAGLIGRTELFAPHIKGSSVTIVTNTTVDPLYGDALRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLTDHADRKTTLVALGGGVVGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURCA (3-dehydroquinate synthase OS=Burkholderia cenocepacia (strain AU 1054) GN=aroB PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 8.971e-29 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG R+YPI+IG+GL+ +L H++G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD + DR+ T VALGGGV+GDM G+AAA Y+RGV Sbjct: 4 VNVDLGDRAYPIHIGAGLIGRTELFAPHIKGSSVTIVTNTTVDPLYGDALRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLTDHADRKTTLVALGGGVVGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_RALEJ (3-dehydroquinate synthase OS=Ralstonia eutropha (strain JMP134) GN=aroB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28 Identity = 63/121 (52.07%), Postives = 86/121 (71.07%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 ++VDLG+RSYPI+IG+GLL + +LL+ HV+G+ ++VTN TV PLY +V +L V V V LPDGE +K +TL +FD + + DR+ T VALGGGV+GDM G+AAA Y+RGV Sbjct: 4 LQVDLGERSYPIHIGTGLLGNAELLRPHVRGQHAVIVTNETVGPLYAARVEASLKELGKTVRV--VTLPDGEAFKQWETLNLIFDALLSAGADRKTTLVALGGGVVGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_PSEA7 (3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain PA7) GN=aroB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28 Identity = 63/121 (52.07%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + VDLG+RSYPIYIG LL H+ G++V V++N TVAPLYL+ + AL V V+LPDGE YK +TL +FD ++ R DR+ T +ALGGGVIGDM G+AAA Y RGV Sbjct: 4 LNVDLGERSYPIYIGENLLGDAQWFAPHIVGRRVAVISNETVAPLYLETLLGALE----GREVTRVVLPDGEAYKQWETLQSIFDALLQDRHDRKTTLIALGGGVIGDMAGFAAACYQRGV 120
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURPS (3-dehydroquinate synthase OS=Burkholderia pseudomallei GN=aroB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG+R+YPI+IG+ L+ +L H+ G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD +E DR+ T +ALGGGVIGDM G+AAA Y+RGV Sbjct: 4 VNVDLGERAYPIHIGADLIGRTELFAPHIAGASVTIVTNTTVEPLYGDTLRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLEQHADRKTTLIALGGGVIGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURP6 (3-dehydroquinate synthase OS=Burkholderia pseudomallei (strain 668) GN=aroB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG+R+YPI+IG+ L+ +L H+ G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD +E DR+ T +ALGGGVIGDM G+AAA Y+RGV Sbjct: 4 VNVDLGERAYPIHIGADLIGRTELFAPHIAGASVTIVTNTTVEPLYGDTLRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLEQHADRKTTLIALGGGVIGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURP1 (3-dehydroquinate synthase OS=Burkholderia pseudomallei (strain 1710b) GN=aroB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG+R+YPI+IG+ L+ +L H+ G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD +E DR+ T +ALGGGVIGDM G+AAA Y+RGV Sbjct: 4 VNVDLGERAYPIHIGADLIGRTELFAPHIAGASVTIVTNTTVEPLYGDTLRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLEQHADRKTTLIALGGGVIGDMTGFAAACYMRGV 122 The following BLAST results are available for this feature:
BLAST of FC929969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929969 ID=FC929969; Name=FC929969; organism=Citrus clementina; type=EST; length=607bpback to top |