FC929969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_HELPJ (3-dehydroquinate synthase OS=Helicobacter pylori J99 GN=aroB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12 Identity = 38/119 (31.93%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 250 VDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + L ++SY +++G + P++ K +K L+++++ VA L+L + + L + V ++ GE YKN +L ++ + A E +L+R +ALGGGVI DM G+A++ Y RG+ Sbjct: 6 IPLKEKSYKVFLG----ELPEIKLK----QKALIISDSIVAGLHLPYLLERLNA----LEVRVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFASSIYFRGI 112
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_GLOVI (3-dehydroquinate synthase OS=Gloeobacter violaceus GN=aroB PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12 Identity = 43/122 (35.25%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDH-PDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V L SY I I G L+ + L + + + LVV+N V Y +V +L +V +P GE +K++ ++ +++ A+E RL+R VALGGGV+GDM G+AA+++LRG+ Sbjct: 4 IPVALPMDSYDICIDEGGLERLGEYLAELGKVNRALVVSNPVVLRHYGARVVRSLNAAG--FETASVTVPAGERHKHLRSVERIYQAALEHRLERSSLIVALGGGVVGDMAGFAASTWLRGI 123
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_STRT2 (3-dehydroquinate synthase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=aroB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12 Identity = 43/122 (35.25%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHV-QGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 +EV+L Q Y I I G L K + + +K+ ++T+N V LY +KV +L V V + + +GE KN+ T+ K ++ I++ + R VALGGGV+GD+ G+ A++Y+RG+ Sbjct: 3 LEVNLKQNPYDIIIEKGALKGVGQWVKSLWEPQKIALITDNHVRGLYAEKVKLSLENEGFEVVVFDFL--EGEASKNLKTVNKAYEFLIKNGMTRSDGIVALGGGVVGDLAGFVASTYMRGI 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_STRT1 (3-dehydroquinate synthase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=aroB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12 Identity = 43/122 (35.25%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHV-QGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 +EV+L Q Y I I G L K + + +K+ ++T+N V LY +KV +L V V + + +GE KN+ T+ K ++ I++ + R VALGGGV+GD+ G+ A++Y+RG+ Sbjct: 3 LEVNLKQNPYDIIIEKGALKGVGQWVKSLWEPQKIALITDNHVRGLYAEKVKLSLENEGFEVVVFDFL--EGEASKNLKTVNKAYEFLIKNGMTRSDGIVALGGGVVGDLAGFVASTYMRGI 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_HELPG (3-dehydroquinate synthase OS=Helicobacter pylori (strain G27) GN=aroB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12 Identity = 37/121 (30.58%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + + L ++SY +++G + P++ K +K L+++++ V+ L+L + + L + V ++ GE YKN +L ++ + A E +L+R +ALGGGVI DM G+A++ Y RG+ Sbjct: 4 IVIPLKEKSYKVFLG----ELPEIKLK----QKALIISDSIVSGLHLSYLLERLKA----LEVRVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFASSIYFRGI 112
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BRAJA (3-dehydroquinate synthase OS=Bradyrhizobium japonicum GN=aroB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12 Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 235 PTIVEVDLGQRSYPIYIGSGLLDH-PDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 P V+V LG R+Y I IG G+L + + G + VVT+ TVA +L+ +L + +++ +GE K L KV + I ++++R +ALGGGV+GD+ G+AAA RGV Sbjct: 10 PVNVDVALGDRAYDIVIGRGVLASLGERVAALRPGVRTAVVTDRTVAKHWLEPTEASLAAAG--IPTSRIVVEEGEISKTYAGLEKVSEALIAAKIERNDLVIALGGGVVGDLAGFAAAILRRGV 132
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BACA2 (3-dehydroquinate synthase OS=Bacillus amyloliquefaciens (strain FZB42) GN=aroB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.630e-12 Identity = 40/123 (32.52%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGK--KVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 +EV +YP+YIG G+ L + K+L++ + V LY D++ L P V+ VI+P GE K++ ++ +AI +DR +A GGGV GD+ G+ AA+++RG+ Sbjct: 4 LEVRTASSAYPVYIGEGIRKQAAALLSSLNRPLTKILLIIDAEVDRLYGDEMFRLLNETWP---VKKVIVPSGEEAKSLKEYERIQTEAIAFHMDRSSCMIAFGGGVTGDLAGFCAATFMRGI 123
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SULNB (3-dehydroquinate synthase OS=Sulfurovum sp. (strain NBC37-1) GN=aroB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12 Identity = 37/99 (37.37%), Postives = 56/99 (56.57%), Query Frame = 1 Query: 310 DLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 D L + KV VVTN TVA +L + + +E + +PDGE YK ++T+ + ++ E + DR+ +A GGGVIGDM G+ A+ Y RG+ Sbjct: 20 DALPQLTFDTKVAVVTNPTVAGYHLQTLLAHIKAPQ----LEVITVPDGEEYKTLETVETILNELFEHKFDRKSLLIAFGGGVIGDMTGFTASLYQRGI 114
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_METI4 (3-dehydroquinate synthase OS=Methylacidiphilum infernorum (isolate V4) GN=aroB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12 Identity = 37/121 (30.58%), Postives = 66/121 (54.55%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 ++V R+Y + IG GLL L + ++ +K + + + Y + D+L + + + +P GE K+ TL + E +LDR+ T +A+GGGV+GD+ G+AA+ +LRG+ Sbjct: 8 IKVSTPSRNYFVRIGKGLLQEGGSLARQLKLEKKIALLFDQAVETYATTLIDSLKAHD--FEPQALAIPSGEGSKSFKTLETIVTALAEMKLDRKSTIIAVGGGVLGDVAGFAASIFLRGI 126
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_HELP2 (3-dehydroquinate synthase OS=Helicobacter pylori (strain P12) GN=aroB PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12 Identity = 38/121 (31.40%), Postives = 70/121 (57.85%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + + L ++SY +++G + P++ K +K L+++++ VA L+L + L + V ++ GE YKN +L ++ + A E +L+R +ALGGGVI DM G+A++ Y RG+ Sbjct: 4 IVIPLKEKSYKVFLG----ELPEIELK----QKALIISDSIVAGLHLSYLLKRLKA----LEVRVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFASSIYFRGI 112 The following BLAST results are available for this feature:
BLAST of FC929969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929969 ID=FC929969; Name=FC929969; organism=Citrus clementina; type=EST; length=607bpback to top |