FC929969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURP0 (3-dehydroquinate synthase OS=Burkholderia pseudomallei (strain 1106a) GN=aroB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG+R+YPI+IG+ L+ +L H+ G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD +E DR+ T +ALGGGVIGDM G+AAA Y+RGV Sbjct: 4 VNVDLGERAYPIHIGADLIGRTELFAPHIAGASVTIVTNTTVEPLYGDTLRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLEQHADRKTTLIALGGGVIGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURMS (3-dehydroquinate synthase OS=Burkholderia mallei (strain SAVP1) GN=aroB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG+R+YPI+IG+ L+ +L H+ G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD +E DR+ T +ALGGGVIGDM G+AAA Y+RGV Sbjct: 4 VNVDLGERAYPIHIGADLIGRTELFAPHIAGASVTIVTNTTVEPLYGDTLRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLEQHADRKTTLIALGGGVIGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURMA (3-dehydroquinate synthase OS=Burkholderia mallei GN=aroB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG+R+YPI+IG+ L+ +L H+ G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD +E DR+ T +ALGGGVIGDM G+AAA Y+RGV Sbjct: 4 VNVDLGERAYPIHIGADLIGRTELFAPHIAGASVTIVTNTTVEPLYGDTLRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLEQHADRKTTLIALGGGVIGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURM9 (3-dehydroquinate synthase OS=Burkholderia mallei (strain NCTC 10229) GN=aroB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG+R+YPI+IG+ L+ +L H+ G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD +E DR+ T +ALGGGVIGDM G+AAA Y+RGV Sbjct: 4 VNVDLGERAYPIHIGADLIGRTELFAPHIAGASVTIVTNTTVEPLYGDTLRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLEQHADRKTTLIALGGGVIGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BURM7 (3-dehydroquinate synthase OS=Burkholderia mallei (strain NCTC 10247) GN=aroB PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.172e-28 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V VDLG+R+YPI+IG+ L+ +L H+ G V +VTN TV PLY D + AL VS V+LPDGE YKN +TL +FD +E DR+ T +ALGGGVIGDM G+AAA Y+RGV Sbjct: 4 VNVDLGERAYPIHIGADLIGRTELFAPHIAGASVTIVTNTTVEPLYGDTLRAALAPLGKRVST--VVLPDGEAYKNWETLNLIFDGLLEQHADRKTTLIALGGGVIGDMTGFAAACYMRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_PSEAB (3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=aroB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.815e-28 Identity = 64/121 (52.89%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + VDLG+RSYPIYIG LL H+ G++V V++N TVAPLYL+ + AL +G+ V V+LPDGE YK +TL +FD ++ R DR+ T +ALGGGVIGDM G+AAA Y RGV Sbjct: 4 LHVDLGERSYPIYIGENLLGDARWFAPHIVGRRVAVISNETVAPLYLETLLKAL-QGH---EVTPVVLPDGEAYKQWETLQLIFDALLKERHDRKTTLIALGGGVIGDMAGFAAACYQRGV 120
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_PSEA8 (3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=aroB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.815e-28 Identity = 64/121 (52.89%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + VDLG+RSYPIYIG LL H+ G++V V++N TVAPLYL+ + AL +G+ V V+LPDGE YK +TL +FD ++ R DR+ T +ALGGGVIGDM G+AAA Y RGV Sbjct: 4 LHVDLGERSYPIYIGENLLGDARWFAPHIVGRRVAVISNETVAPLYLETLLKAL-QGH---EVTPVVLPDGEAYKQWETLQLIFDALLKERHDRKTTLIALGGGVIGDMAGFAAACYQRGV 120
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_PSEAE (3-dehydroquinate synthase OS=Pseudomonas aeruginosa GN=aroB PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 7.594e-28 Identity = 64/121 (52.89%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + VDLG+RSYPIYIG LL H+ G++V V++N TVAPLYL+ + AL +G+ V V+LPDGE YK +TL +FD ++ R DR+ T +ALGGGVIGDM G+AAA Y RGV Sbjct: 4 LHVDLGERSYPIYIGENLLGDARWFAPHIVGRRVAVISNETVAPLYLETLLKAL-QGH---EVTPVVLPDGEAYKQWETLQLIFDVLLKERHDRKTTLIALGGGVIGDMAGFAAACYQRGV 120
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_NITEU (3-dehydroquinate synthase OS=Nitrosomonas europaea GN=aroB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 7.594e-28 Identity = 62/114 (54.39%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 265 RSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 RSY I+IG GLL DLL H+ GKK +VTN T+APLYL+K+ AL + V + LPDGE YK+ +TL +FD +E R +RR +ALGGGVIGD+ G+AAA+YLRGV Sbjct: 18 RSYSIHIGQGLLSRMDLLLPHLPGKKAAIVTNTTIAPLYLEKLRSALAEHH--VETFAITLPDGERYKHWETLNLIFDALLEHRCERRTPLIALGGGVIGDLTGFAAATYLRGV 129
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_NITEC (3-dehydroquinate synthase OS=Nitrosomonas eutropha (strain C91) GN=aroB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.918e-28 Identity = 63/114 (55.26%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 265 RSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 RSY I+IG LL DLL H+ GKK +VTN T+APLYL+K+ AL V VILPDGE YKN +TL +FD +E R +R+ +ALGGGV+GD+ G+AAASYLRGV Sbjct: 18 RSYTIHIGQELLTRIDLLLPHLPGKKAAIVTNTTIAPLYLEKLRSALAEHQ--VETFAVILPDGEQYKNWETLNLIFDALLEHRCERKTPLIALGGGVVGDLTGFAAASYLRGV 129 The following BLAST results are available for this feature:
BLAST of FC929969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929969 ID=FC929969; Name=FC929969; organism=Citrus clementina; type=EST; length=607bpback to top |