FC929969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BARQU (3-dehydroquinate synthase OS=Bartonella quintana GN=aroB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11 Identity = 47/127 (37.01%), Postives = 68/127 (53.54%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVL------VVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V V L + Y I IG GL+ KH KK L +VT++ VA L+LD + LT+ + +I+ GE K+ TL V D+ + +RL+R +A GGGVIGD+ G+AA+ RG+ Sbjct: 6 VTVKLDKHCYDIIIGPGLVAQAVWQIKHSLHKKDLHQTRFALVTDSNVASLHLDTLQAELTKNK--IHTVPIIVEAGEQSKSFLTLQIVIDRILAARLERGDCVIAFGGGVIGDLGGFAASIIRRGM 130
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_RHOP5 (3-dehydroquinate synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=aroB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.945e-11 Identity = 41/129 (31.78%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 232 APTIVEVDLGQRSYPIYIGSGLLDHPDLLQKHVQ----GKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 AP VEV LG R Y I IG G ++ L + + G + +VT+ +VA +L + +L ++ +++ +GE K+ L +V + IE++++R +ALGGGV+GD+ G+A++ RG+ Sbjct: 9 APITVEVALGDRGYDIVIGRGGIES---LGRRITALRPGARTAIVTDRSVAKHWLPRAQASLDE--TGIAHSTIVVEEGEVSKSYAGLQQVCEALIEAKIERNDLVIALGGGVVGDLAGFASSIVRRGL 132
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_PROM4 (3-dehydroquinate synthase OS=Prochlorococcus marinus (strain MIT 9211) GN=aroB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.945e-11 Identity = 46/124 (37.10%), Postives = 70/124 (56.45%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIG-SGLLDHPDLLQK--HVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 +++ L Y + I +GL + L+K + KVLVVTN V+ Y + L+ N ++ + + GE KN+ T+ + + A SRL+R +ALGGGVIGDM G+AAA++LRGV Sbjct: 8 IKIKLAHNPYEVVIKKNGLARIGEELKKIGFKKATKVLVVTNKDVSVHYGKEFIHNLSDNGFNPTL--IEIKAGEERKNLATISDIHNAAYTSRLERGSLMIALGGGVIGDMTGFAAATWLRGV 129
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_OPITP (3-dehydroquinate synthase OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=aroB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = 1 Query: 235 PTIVEVDLGQRSYPIYIGSGLLDH--PDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 P + VDLG RSYPI + + ++ + + G+KV V T+ VA + + +A+ +P ++ GE+ K++ + + D ++DRR A GGGVIGD+ G+ AAS+LRG+ Sbjct: 2 PNTLTVDLGHRSYPIVFAADVRNNVRDQVAELTTAGRKVAVFTDEQVASAQVGAL-EAMFGSSPRLA-----FAPGESAKSLASFGRAMDFLAAQKVDRRGVVFAFGGGVIGDLAGFIAASWLRGI 121
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_LACPL (3-dehydroquinate synthase OS=Lactobacillus plantarum GN=aroB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.459e-11 Identity = 44/124 (35.48%), Postives = 61/124 (49.19%), Query Frame = 1 Query: 238 TIVEVDLGQRSYPIYIGSGLLDHPDLLQKHVQ-GKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 T +EV + Y I I L H L V ++V VVT+ V P Y VTD LT V V V P GE K+ + + D+ + R +ALGGGV+GD+ G+ A+ Y+RG+ Sbjct: 4 TNIEVKTRVKQYQIKIMINSLHHLGTLVTKVWCARQVAVVTDTNVGPYYAKLVTDELTAAGFKVRVMTV--PAGEESKSWSQVQSLIDQLSAAHFSRSDGVLALGGGVVGDLAGFVASIYMRGI 125
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_PROM3 (3-dehydroquinate synthase OS=Prochlorococcus marinus (strain MIT 9303) GN=aroB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11 Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGS-GLLDHPDLLQKH--VQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V L + Y + IG GL L++ +G KVLVV+N VA Y D +L+ ++ +++ GE+ K ++ + D A E++L+R VALGGGV+GDM G+AAA++LRG+ Sbjct: 12 IPVALSHQPYEVVIGGEGLRGVGKELRRAGLKEGIKVLVVSNADVAEPYGDLCLQSLSDSGYRPTL--LVIEAGEDQKTPVSVALIHDAAYEAKLERGSLMVALGGGVVGDMTGFAAATWLRGI 133
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_BARBK (3-dehydroquinate synthase OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=aroB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.435e-11 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 229 KAPTIVEVDLGQRSYPIYIGSGLLDHPDLLQK---HVQG---KKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 KA TI V L + Y I IGS L+ L K H +G K++ +VT+ VA L+L+ + L+ + +I+ GE K+ L + DK + +RL+R + +A GGGVIGD+ G+AA+ RG+ Sbjct: 2 KAKTIT-VKLDKCCYDIIIGSDLIAQAALQIKSFFHQKGPHQKRLAIVTDTNVAALHLETLQAGLSANQ--IHTIPIIVEAGEQSKSFPVLQTIIDKILAARLERGDSIIAFGGGVIGDLGGFAASIIRRGM 130 The following BLAST results are available for this feature:
BLAST of FC929969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929969 ID=FC929969; Name=FC929969; organism=Citrus clementina; type=EST; length=607bpback to top |