FC929969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SHESR (3-dehydroquinate synthase OS=Shewanella sp. (strain MR-7) GN=aroB PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.442e-26 Identity = 58/121 (47.93%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 ++VDLG+RSYPIYIG L+ + L +++ K++L+VTN TVAPLYL ++ D + V +VILPDGE +K++ L +F ++ R VALGGGVIGDM G+AAA Y RGV Sbjct: 5 IQVDLGERSYPIYIGQSLMSDSETLSRYLLKKRILIVTNETVAPLYLKQIQDTMASFG---EVSSVILPDGEQFKDLTHLDSIFTALLQRNYGRDSVLVALGGGVIGDMTGFAAACYQRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_HALHL (3-dehydroquinate synthase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=aroB PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.442e-26 Identity = 59/119 (49.58%), Postives = 80/119 (67.23%), Query Frame = 1 Query: 250 VDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 V+LG+RSYPIYIG G+LD +L +H+ + L+V+N TVAPLY +++ P V++V L DGE YK + T +V+D IE R DR T +ALGGGV+GDM G+ AA+Y RGV Sbjct: 6 VELGERSYPIYIGDGVLDQ-GVLAEHLVADRALLVSNETVAPLYAERLAV------PGAEVQSVTLHDGERYKTLQTCEQVYDALIEGRFDRSATVIALGGGVVGDMAGFCAATYQRGV 117
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_COLP3 (3-dehydroquinate synthase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=aroB PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.442e-26 Identity = 60/122 (49.18%), Postives = 80/122 (65.57%), Query Frame = 1 Query: 241 IVEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 I+ +DLG+RSYPIYI SGL++ DLL H++ K+V +VTN+ VAPLYLD + LT + V+ VILPDGE KN+ + + R T +ALGGGVIGD+ G+AAA Y RG+ Sbjct: 3 ILNLDLGERSYPIYIDSGLINKTDLLSSHIRAKRVCIVTNDIVAPLYLDSLKAKLT----DFEVDEVILPDGEAEKNLANFEVIISHLLTLEHGRDTTLIALGGGVIGDITGFAAACYQRGI 120
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SHESM (3-dehydroquinate synthase OS=Shewanella sp. (strain MR-4) GN=aroB PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.108e-26 Identity = 58/121 (47.93%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 ++VDLG+RSYPIYIG L+ + L +++ K++L+VTN TVAPLYL ++ D + V +VILPDGE +K++ L +F ++ R VALGGGVIGDM G+AAA Y RGV Sbjct: 5 IQVDLGERSYPIYIGQSLMSDSETLSRYLLKKRILIVTNETVAPLYLKQIQDTMASFG---EVSSVILPDGEQFKDLTHLDSIFTALLQRNYARDSVLVALGGGVIGDMTGFAAACYQRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SHESA (3-dehydroquinate synthase OS=Shewanella sp. (strain ANA-3) GN=aroB PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.283e-26 Identity = 58/121 (47.93%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 ++VDLG+RSYPIYIG L+ + L +++ K++L+VTN TVAPLYL ++ D + V +VILPDGE +K++ L +F ++ R VALGGGVIGDM G+AAA Y RGV Sbjct: 5 IQVDLGERSYPIYIGQSLMSDGETLSRYLLKKRILIVTNETVAPLYLKQIQDTMASFG---EVTSVILPDGEQFKDLTHLDSIFTALLQRNYGRDSVLVALGGGVIGDMTGFAAACYQRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SALTY (3-dehydroquinate synthase OS=Salmonella typhimurium GN=aroB PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.212e-25 Identity = 63/121 (52.07%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V LG+RSYPI I +GL + P G +V++VTN T+APLYLDKV L R V+V++VILPDGE YK++ L VF ++ R T VALGGGVIGD+ G+AAASY RGV Sbjct: 4 ITVTLGERSYPITIAAGLFNEPASFLPLKSGDQVMLVTNETLAPLYLDKVRGVLERAG--VNVDSVILPDGEQYKSLTVLDTVFTALLKKPHGRDTTLVALGGGVIGDLTGFAAASYQRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SALTI (3-dehydroquinate synthase OS=Salmonella typhi GN=aroB PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.212e-25 Identity = 63/121 (52.07%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V LG+RSYPI I +GL + P G +V++VTN T+APLYLDKV L R V+V++VILPDGE YK++ L VF ++ R T VALGGGVIGD+ G+AAASY RGV Sbjct: 4 ITVTLGERSYPITIAAGLFNEPASFLPLKSGDQVMLVTNETLAPLYLDKVRGVLERAG--VNVDSVILPDGEQYKSLTVLDTVFTALLKKPHGRDTTLVALGGGVIGDLTGFAAASYQRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SALSV (3-dehydroquinate synthase OS=Salmonella schwarzengrund (strain CVM19633) GN=aroB PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.212e-25 Identity = 63/121 (52.07%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V LG+RSYPI I +GL + P G +V++VTN T+APLYLDKV L R V+V++VILPDGE YK++ L VF ++ R T VALGGGVIGD+ G+AAASY RGV Sbjct: 4 ITVTLGERSYPITIAAGLFNEPASFLPLKSGDQVMLVTNETLAPLYLDKVRGVLERAG--VNVDSVILPDGEQYKSLTVLDTVFTALLKKPHGRDTTLVALGGGVIGDLTGFAAASYQRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SALPK (3-dehydroquinate synthase OS=Salmonella paratyphi A (strain AKU_12601) GN=aroB PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.212e-25 Identity = 63/121 (52.07%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V LG+RSYPI I +GL + P G +V++VTN T+APLYLDKV L R V+V++VILPDGE YK++ L VF ++ R T VALGGGVIGD+ G+AAASY RGV Sbjct: 4 ITVTLGERSYPITIAAGLFNEPASFLPLKSGDQVMLVTNETLAPLYLDKVRGVLERAG--VNVDSVILPDGEQYKSLTVLDTVFTALLKKPHGRDTTLVALGGGVIGDLTGFAAASYQRGV 122
BLAST of FC929969 vs. ExPASy Swiss-Prot
Match: AROB_SALPC (3-dehydroquinate synthase OS=Salmonella paratyphi C (strain RKS4594) GN=aroB PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.212e-25 Identity = 63/121 (52.07%), Postives = 80/121 (66.12%), Query Frame = 1 Query: 244 VEVDLGQRSYPIYIGSGLLDHPDLLQKHVQGKKVLVVTNNTVAPLYLDKVTDALTRGNPNVSVENVILPDGENYKNMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGYAAASYLRGV 606 + V LG+RSYPI I +GL + P G +V++VTN T+APLYLDKV L R V+V++VILPDGE YK++ L VF ++ R T VALGGGVIGD+ G+AAASY RGV Sbjct: 4 ITVTLGERSYPITIAAGLFNEPASFLPLKSGDQVMLVTNETLAPLYLDKVRGVLERAG--VNVDSVILPDGEQYKSLTVLDTVFTALLKKPHGRDTTLVALGGGVIGDLTGFAAASYQRGV 122 The following BLAST results are available for this feature:
BLAST of FC929969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 407
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929969 ID=FC929969; Name=FC929969; organism=Citrus clementina; type=EST; length=607bpback to top |