FC929974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929974 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18 Identity = 55/173 (31.79%), Postives = 94/173 (54.34%), Query Frame = 2 Query: 197 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKY-TYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIERFWIVGRG 712 ++Y+ V++GTVVLAE ++ S N STIA Q L+K+P + + +YS D + F+ G L +ADE GR +PF FLE + F + YG +I + + AY ++ EF L + ++Y + P +S++K ++ +V+ +M++NI+ I+ RG Sbjct: 3 ILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQ--------------------AYAMNDEFSRVLNQQIEYYSNDP-NADTISRIKGEMNQVRDVMIENIDN--ILDRG 152
BLAST of FC929974 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 51/174 (29.31%), Postives = 95/174 (54.60%), Query Frame = 2 Query: 197 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPA--SSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIERFWIVGRG 712 ++Y+ V++GTVVLAE ++ +GN + + L+KL S + +S D + F+ L G FL +A+++ GR VPF +LE + F + YG N + AY ++ EF L + M++ S+P + L++++ +++E++ +M++NIE+ I+ RG Sbjct: 3 IVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHN--------------------APAYAMNDEFSRVLHQQMEFFSSNP-SVDTLNRVRGEVSEIRSVMVENIEK--IMERG 153
BLAST of FC929974 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16 Identity = 47/164 (28.66%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 197 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIE 688 ++++ V++GT +LA+H GNF + Q L K+P+ ++K TYS + F+++ V+L + D+ RS F FL VK F+ YG+ Q ++ Y ++ EF L +++ S + + K+ + +AQ+ E+KGIM+ NI+ Sbjct: 3 ILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQT--------------------ALPYAMNSEFSSVLAAQLKH-HSENKSLDKVMETQAQVDELKGIMVRNID 145
BLAST of FC929974 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.046e-16 Identity = 46/164 (28.05%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 197 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIE 688 ++++ V++GT +LA+H GNF + Q L K+P+ ++K TYS + F+++ V+L + D+ RS F FL VK F+ YG+ Q ++ Y ++ EF L +++ S + + ++++ +AQ+ E+KGIM+ NI+ Sbjct: 3 ILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTYGSRAQT--------------------ALPYAMNSEFSSVLAAQLKH-HSENQSLDRVTETQAQVDELKGIMVRNID 145
BLAST of FC929974 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15 Identity = 46/164 (28.05%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 197 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIE 688 ++++ V++GT +LA+H GNF + Q L K+P+ ++K TYS + F+++ V+L + D+ RS F FL +K F+ YG+ Q ++ Y ++ EF L +++ S + + K+ + +AQ+ E+KGIM+ NI+ Sbjct: 3 ILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT--------------------ALPYAMNSEFSSVLAAQLKH-HSENKGLDKVMETQAQVDELKGIMVRNID 145
BLAST of FC929974 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15 Identity = 45/164 (27.44%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 197 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIE 688 ++++ V++GT +LA+H GNF + Q L K+P+ ++K TYS + F+++ ++L + D+ RS F FL +K F+ YG+ Q ++ Y ++ EF L ++Y S + ++++ +AQ+ E+KGIM+ NI+ Sbjct: 3 ILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT--------------------ALPYAMNSEFSSVLAAQLKY-HSESKGTDQVAETQAQVDELKGIMVRNID 145
BLAST of FC929974 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.015e-15 Identity = 46/164 (28.05%), Postives = 85/164 (51.83%), Query Frame = 2 Query: 197 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIE 688 ++++ V++GT +LA+H GNF + Q L K+P+ ++K TYS + F+++ V+L + D+ RS F FL +K F+ YG+ Q ++ Y ++ EF L +++ S + + K+ + +AQ+ E+KGIM+ NI+ Sbjct: 3 ILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT--------------------ALPYAMNSEFSSVLAAQLKH-HSENKGLDKVMETQAQVDELKGIMVRNID 145
BLAST of FC929974 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 7.658e-15 Identity = 45/164 (27.44%), Postives = 84/164 (51.22%), Query Frame = 2 Query: 197 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIE 688 ++++ V++GT +LA+H GNF + Q L K+P+ ++K TY + F+++ V+L + D+ RS F FL +K F+ YG+ Q ++ Y ++ EF L +++ S + + K+ + +AQ+ E+KGIM+ NI+ Sbjct: 3 ILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQT--------------------ALPYAMNSEFSSVLAAQLKH-HSENKGLDKVMETQAQVDELKGIMVRNID 145
BLAST of FC929974 vs. ExPASy Swiss-Prot
Match: VAM7A_DICDI (Vesicle-associated membrane protein 7A OS=Dictyostelium discoideum GN=vamp7A PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11 Identity = 48/170 (28.24%), Postives = 85/170 (50.00%), Query Frame = 2 Query: 182 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIER 691 M+Q ++Y+ VS V L EH +GNF +A + + K+P +S K Y+ + H F+++ ++ FL + E +G +P FL ++ F + YG S ++ P A F L+E M+Y S+P+ +K++ + Q++E KG + D IE+ Sbjct: 1 MSQTDILYACVSYKGVCLVEHKIANGNFIDLARRLITKIPPTSKKI-YTSENHNFHYISENDLAFLCLCHEKLGVQIPSEFLSDIRQQFIRSYGQSF--SQNSPTATYD------------------PFIRVLEERMKY-YSNPKS-NKMNLVMDQVSEAKGALTDAIEK 147 The following BLAST results are available for this feature:
BLAST of FC929974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929974 ID=FC929974; Name=FC929974; organism=Citrus clementina; type=EST; length=720bpback to top |