FC929976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929976 vs. ExPASy Swiss-Prot
Match: S36A4_HUMAN (Proton-coupled amino acid transporter 4 OS=Homo sapiens GN=SLC36A4 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17 Identity = 65/218 (29.82%), Postives = 102/218 (46.79%), Query Frame = 2 Query: 92 GRVAVDAMIVLAQAGFCVSYLIFIANTLTHM----------INNSTTSQTILGFLSPKALYIWGCF-PFQLGLNSIPTLTHLAPLSIFADIVDLGAMGLVMVEDVMISMKQRPALKAFGDFSVFSYGIGVAVYAFEGVGMILPLESETRNKQRFGRILGWCMAFISLLYGSFGALGYFAFGEETKDIITTNFGAGL-----VSTLVNVGLCVNLFLTF 697 GR VD +V+ Q GFC Y++F+A + + I+NST S S CF PF + L I L +L LS A+ V + +++ + V+ +M L + + G AV+AFEG+G++LPLE++ + +RF + L M ++ LY + LGY F +E K IT N + V L + G+ V + F Sbjct: 151 GRSVVDFFLVITQLGFCSVYIVFLAENVKQVHEGFLESKVFISNSTNSSNPCERRSVDLRIYMLCFLPFIILLVFIRELKNLFVLSFLAN-VSMAVSLVIIYQYVVRNMPDPHNLPIVAGWKKYPLFFGTAVFAFEGIGVVLPLENQMKESKRFPQALNIGMGIVTTLYVTLATLGYMCFHDEIKGSITLNLPQDVWLYQSVKILYSFGIFVTYSIQF 367
BLAST of FC929976 vs. ExPASy Swiss-Prot
Match: S36A4_MOUSE (Proton-coupled amino acid transporter 4 OS=Mus musculus GN=Slc36a4 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16 Identity = 64/218 (29.36%), Postives = 103/218 (47.25%), Query Frame = 2 Query: 92 GRVAVDAMIVLAQAGFCVSYLIFIANTLTHMINNSTTSQTILGFLSPKA-----------LYIWGCFPFQLGLNSIPTLTHLAPLSIFADIVDLGAMGLVMVEDVMISMKQRPALKAFGDFSVFSYGIGVAVYAFEGVGMILPLESETRNKQRFGRILGWCMAFISLLYGSFGALGYFAFGEETKDIITTNFGAGL-----VSTLVNVGLCVNLFLTF 697 GR VD +V+ Q GFC Y++F+A + + S I+ S + +Y+ P + L I L +L LS A+I + A +++ + V+ +M L + + G AV+AFEG+G++LPLE++ R +RF + L MA +++LY S LGY F +E K IT N + V L + G+ V + F Sbjct: 148 GRQVVDFFLVITQLGFCSVYIVFLAENVKQVHEGFLGSTPIVSNGSDLSHACERRSVDLRVYMLCFLPLIILLVFIRELKNLFVLSFLANI-SMAASLVIIYQYVVRNMPDPHNLPIVAGWKKYPLFFGTAVFAFEGIGVVLPLENQMRESKRFPQALNIGMAIVTVLYISLATLGYMCFRDEIKGSITLNLPQDMWLYQSVKILYSFGIFVTYSIQF 364
BLAST of FC929976 vs. ExPASy Swiss-Prot
Match: S36A2_MOUSE (Proton-coupled amino acid transporter 2 OS=Mus musculus GN=Slc36a2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 61/195 (31.28%), Postives = 109/195 (55.90%), Query Frame = 2 Query: 92 GRVAVDAMIVLAQAGFCVSYLIFIANTLTHMIN--NSTT-----SQTILGFLSP---KALYIWGCFPFQLGLNSIPTLTHLAPLSIFADIVDLGAM-GLVMVEDVMIS----MKQRPALKAFGDFSVFSYGIGVAVYAFEGVGMILPLESETRNKQRFGRILGWCMAFISLLYGSFGALGYFAFGEETKDIITTN 631 GR V +++ Q GFC Y++F+A+ L ++ NSTT ++T++ L+P LY+ P LGL + + +L L+IF+ + ++ + LV++ +I Q P + ++ + +F G A+++FE +G++LPLE++ ++ + F IL M+ I+ LY + GALGY FG++ K IT N Sbjct: 141 GRRVVSFFLIVTQLGFCCVYIVFLADNLKQVVEAVNSTTISCHKNETVV--LTPTMDSRLYMLSFLPV-LGL--LVFVRNLRVLTIFSLLANISMLVSLVIIAQYIIQEIPDASQLPLVASWKTYPLF---FGTAIFSFESIGVVLPLENKMKDARGFPTILSLGMSIITTLYIAIGALGYLRFGDDIKASITLN 327
BLAST of FC929976 vs. ExPASy Swiss-Prot
Match: AVT4_YEAST (Vacuolar amino acid transporter 4 OS=Saccharomyces cerevisiae GN=AVT4 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15 Identity = 55/224 (24.55%), Postives = 113/224 (50.45%), Query Frame = 2 Query: 47 INSFGDLGYTVCGSVGRVAVDAMIVLAQAGFCVSYLIFIANTLTHMINNSTTSQTILGFLSPKALYIWGCFPFQLGLNSIPTLTHLAPLSIFADIVDLGAMGLVMV---EDVMISMKQRPALKAFGDFSV--FSYGIGVAVYAFEGVGMILPLESETRNKQRFGRILGWCMAFISLLYGSFGALGYFAFGEETKDIITTNF-GAGLVSTLVNVGLCVNLFLTFP 700 ++SFGD+G + G R+ + +V+ Q GF +Y+IF A L ++N +G L L ++ F + L+ I ++ L+ S+ A+ + + +V++ + + + PA+ + ++ IG A++AFEG+G+I+P++ RN ++F +L + ++L+ S LGY A+G + +I N + + L+ + + + L+ P Sbjct: 357 VSSFGDIGLKLYGPWMRIIILFSLVITQVGFSGAYMIFTAKNLQAFLDNVFH----VGVLPLSYLMVFQTIIF-IPLSFIRNISKLSLPSLLANFFIMAGLVIVIIFTAKRLFFDLMGTPAMGVVYGLNADRWTLFIGTAIFAFEGIGLIIPVQDSMRNPEKFPLVLALVILTATILFISIATLGYLAYGSNVQTVILLNLPQSNIFVNLIQLFYSIAIMLSTP 575 The following BLAST results are available for this feature:
BLAST of FC929976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929976 ID=FC929976; Name=FC929976; organism=Citrus clementina; type=EST; length=707bpback to top |