FC929983

Overview
NameFC929983
Unique NameFC929983
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929983 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.443e-44
Identity = 96/183 (52.46%), Postives = 126/183 (68.85%), Query Frame = 3
Query:  150 EEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQL-SSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVFRVYGLASVCRYLLPNEDGVSLAPIFLLAQDKVSVDPGYHLKDCLLEGTLPFMKAHNAKNPFEYAMKDARRRNLFNQSMRNHTALVMKKILEIXQGF 695
            +E+    M+L  SS+LPM +K  IEL +LEI+AKA P  L S S+IAS LPT N +A  +LDR+LRLLASYS L  +L    DG V R+YGLASVC++L  NEDGVS++P+ L+ QDKV ++  YHLKD +LEG +PF KA+     FEY   D R   +FN+ M +H+ + MKKILE  +GF
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAY-GMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGF 197          
BLAST of FC929983 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.270e-43
Identity = 93/185 (50.27%), Postives = 127/185 (68.65%), Query Frame = 3
Query:  144 NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVFRVYGLASVCRYLLPNEDGVSLAPIFLLAQDKVSVDPGYHLKDCLLEGTLPFMKAHNAKNPFEYAMKDARRRNLFNQSMRNHTALVMKKILEIXQGF 695
            ++EE+F+  M+LA +S+LPM +K+ IEL +LE++ KA     +S +E+A+QL T N EA  +LDR+LRLL SY+ L   L T  DG V R+YGLA VC++L  NEDGVS+AP+ L+ QDKV ++  YHLKD +L+G +PF KA+     FEY   D R   +FNQ M NH+ + MKKILE   GF
Sbjct:   13 DEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAY-GMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGF 196          
BLAST of FC929983 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.828e-43
Identity = 98/197 (49.75%), Postives = 129/197 (65.48%), Query Frame = 3
Query:  108 MNSFHDQLMKPPNDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVFRVYGLASVCRYLLPNEDGVSLAPIFLLAQDKVSVDPGYHLKDCLLEGTLPFMKAHNAKNPFEYAMKDARRRNLFNQSMRNHTALVMKKILEIXQGF 695
            M S +  L +   ++E F+  M+LA +S+LPM +KA +EL +LEI+AK+ P   +S SE+A+QLPT N EA  +LDRM RLLA+YS L   L T  DG V R+Y LA VC++L  N DGVS+API L+ QDKV ++  YHL D +L+G +PF KA+     FEY   D R   +FN  M +HT L MKKILE   GF
Sbjct:    1 MGSINQSLTQ--TEDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAY-GMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGF 194          
BLAST of FC929983 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 2.828e-43
Identity = 93/184 (50.54%), Postives = 127/184 (69.02%), Query Frame = 3
Query:  147 DEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASP-SQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVFRVYGLASVCRYLLPNEDGVSLAPIFLLAQDKVSVDPGYHLKDCLLEGTLPFMKAHNAKNPFEYAMKDARRRNLFNQSMRNHTALVMKKILEIXQGF 695
            ++E F+  M+LA +S+LPM +K+ +EL +LEI+AKA P + +S SE+A+QLPT N EA  +LDRMLRLLA+YS L   L T  DG V R+Y LA VC+ L  N DGVS+AP+ L+ QDKV ++  YHL D +L+G +PF KA+     FEY   D R   +FN+ M +H+ + MKKILE  +GF
Sbjct:   12 EDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAY-GMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGF 194          
BLAST of FC929983 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.833e-42
Identity = 89/185 (48.11%), Postives = 126/185 (68.11%), Query Frame = 3
Query:  144 NDEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQ-LSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVFRVYGLASVCRYLLPNEDGVSLAPIFLLAQDKVSVDPGYHLKDCLLEGTLPFMKAHNAKNPFEYAMKDARRRNLFNQSMRNHTALVMKKILEIXQGF 695
            ++EE+F+  M+LA +S+LPM +K+ IEL +LE++ K+     +S  ++A+QLPT N +A  +LDR+LRLL SY+ L   L T  DG V R+YGLA VC++L  NEDGVS+AP+ L+ QDKV ++  YHL D +++G +PF KA+     FEY   D R   +FNQ M NH+ + MKKILE   GF
Sbjct:   13 DEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAY-GMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGF 196          
BLAST of FC929983 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.127e-42
Identity = 94/183 (51.37%), Postives = 123/183 (67.21%), Query Frame = 3
Query:  150 EEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQL-SSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVFRVYGLASVCRYLLPNEDGVSLAPIFLLAQDKVSVDPGYHLKDCLLEGTLPFMKAHNAKNPFEYAMKDARRRNLFNQSMRNHTALVMKKILEIXQGF 695
            +E+    ++L  SS+LPM +K  IEL +LEI+AKA P  L   S+IAS LPT N  A  +LDR+LRLLASYS L  +L    DG V R+YGLASVC++L  NEDGVS++P+ L+ QDKV ++  YHLKD +LEG +PF KA+     FEY   D R   +FN+ M  H+ + MKKILE  +GF
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAY-GMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGF 197          
BLAST of FC929983 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.098e-42
Identity = 88/179 (49.16%), Postives = 125/179 (69.83%), Query Frame = 3
Query:  162 MLIMELAHSSLLPMTMKAIIELGVLEILAKASP-SQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVFRVYGLASVCRYLLPNEDGVSLAPIFLLAQDKVSVDPGYHLKDCLLEGTLPFMKAHNAKNPFEYAMKDARRRNLFNQSMRNHTALVMKKILEIXQGF 695
            +  M+LA +S+LP  + A IEL +LEI+A+A P + L+  E+ASQLPT N +A  +LDR+ RLLASYS LT  L    +G V R+YGLA +C++L+ NEDGVSLAP+ L+ QD+V ++  Y++KD +LEG +PF KAH     F+Y   D R   +FN++M +H+ ++MKKILE   GF
Sbjct:    3 LFAMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAH-GMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGF 180          
BLAST of FC929983 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.552e-41
Identity = 91/185 (49.19%), Postives = 125/185 (67.57%), Query Frame = 3
Query:  147 DEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASP-SQLSSSEIASQLP-TNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVFRVYGLASVCRYLLPNEDGVSLAPIFLLAQDKVSVDPGYHLKDCLLEGTLPFMKAHNAKNPFEYAMKDARRRNLFNQSMRNHTALVMKKILEIXQGF 695
            D++ F+  M+LA +S+LPM +K  IEL +LE +AKA P   +SSSE+ +QLP  NN EA  ++DR+  LLASYS LT  L    DG   R YGLA VC++L+ N+ GVSLAP+ L+ QDKV ++  Y+LKD +L+G +PF KA+   + FEY  KD R   +FN  M NH+ + MKKI+E+  GF
Sbjct:    6 DDQAFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAY-GMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGF 189          
BLAST of FC929983 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41
Identity = 91/183 (49.73%), Postives = 124/183 (67.76%), Query Frame = 3
Query:  147 DEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKASPSQLSSSEIASQLPTNNQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVFRVYGLASVCRYLLPNEDGVSLAPIFLLAQDKVSVDPGYHLKDCLLEGTLPFMKAHNAKNPFEYAMKDARRRNLFNQSMRNHTALVMKKILEIXQGF 695
            D+E  +  M+LA +S+LPM +K+ +EL +LEI+AK + S +S +EIAS+LPT N EA  +LDR+LRLL SYS LT +        V R+YGL  VC+YL  NEDGVS+A + L+ QDKV ++  YHLKD +L+G +PF KA+   + FEY   D R   +FN  M NH+ + MKKILE  +GF
Sbjct:   16 DDEAALFAMQLASASVLPMALKSALELDLLEIMAK-NGSPMSPTEIASKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAY-GMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGF 196          
BLAST of FC929983 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.970e-38
Identity = 85/191 (44.50%), Postives = 125/191 (65.45%), Query Frame = 3
Query:  147 DEEDFMLIMELAHSSLLPMTMKAIIELGVLEILAKAS-------PSQLSSSEIASQLPTN-NQEASTVLDRMLRLLASYSFLTYNLVTNKDGNVFRVYGLASVCRYLLPNEDGVSLAPIFLLAQDKVSVDPGYHLKDCLLEGTLPFMKAHNAKNPFEYAMKDARRRNLFNQSMRNHTALVMKKILEIXQGF 695
            DEE  M  ++LA SS+LPMT+K  IELG+LE L  A+        + L+ +E+A +LP+  N  A+ ++DRMLRLLASY+ +   +    DG + R Y  A VC++L PNEDGVS+A + L+ QDKV ++  Y+LKD +L+G +PF KA+     FEY   DAR   +FN+ M+NH+ ++ KK+L++  GF
Sbjct:   13 DEEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAY-GMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGF 202          
The following BLAST results are available for this feature:
BLAST of FC929983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT3_POPKI7.443e-4452.46Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT2_OCIBA1.270e-4350.27Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_CAPCH2.828e-4349.75Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_CAPAN2.828e-4350.54Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_OCIBA1.833e-4248.11Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT2_POPTM3.127e-4251.37Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_EUCGL9.098e-4249.16Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_ZINEL1.552e-4149.19Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
OMT1_ARATH2.027e-4149.73Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
OMT1_ORYSJ7.970e-3844.50Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC34002E07EF PostHarvC1 Citrus clementina cDNA clone C34002E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929983 ID=FC929983; Name=FC929983; organism=Citrus clementina; type=EST; length=696bp
AAACTAATATATCTATACGTGTATATATATAGTTATATACTGAGCGCTCA
TCAACATCATCCATTGCCATTTTGTTAATTTCAGCATATCCTACTCCGAG
AATTAAGATGAATTCATTCCATGACCAACTCATGAAACCACCAAACGATG
AGGAAGATTTCATGCTGATCATGGAGCTTGCCCACAGCTCATTACTTCCG
ATGACCATGAAAGCTATCATCGAGCTTGGTGTGTTAGAGATTTTAGCTAA
AGCTAGTCCATCTCAGCTTTCTTCTTCTGAGATTGCATCTCAGCTGCCCA
CAAATAACCAAGAAGCCTCAACAGTACTTGATCGAATGTTACGACTCCTT
GCTAGTTACTCTTTCCTAACATATAATCTTGTCACAAATAAAGATGGAAA
TGTTTTCAGAGTATATGGTTTAGCGTCCGTTTGCAGATATTTGCTTCCAA
ATGAAGACGGAGTTTCTCTTGCTCCCATTTTCCTCTTAGCTCAGGACAAA
GTTTCTGTAGATCCTGGGTACCACTTGAAAGATTGTTTATTGGAAGGGAC
CCTGCCTTTTATGAAGGCACATAATGCAAAAAATCCATTTGAGTATGCTA
TGAAAGATGCTAGAAGACGGAACCTCTTCAATCAATCAATGCGCAATCAT
ACGGCTTTAGTTATGAAGAAAATTCTTGAAATCTANCAAGGATTTG
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