FC929995
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929995 vs. ExPASy Swiss-Prot
Match: CH10_STAEQ (10 kDa chaperonin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=groS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11 Identity = 32/93 (34.41%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 319 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 594 +KPLG+RV+++ K E+ T GI L +A+ K G ++AVG+G+ + ++ V G +++ +YAGTE++ +LI+ E+D++ I+E Sbjct: 2 LKPLGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIIAVGQGRLLDNGTQVAPQVSEGDTIVFQQYAGTEVKRGDKTYLILNEEDILAIIE 94
BLAST of FC929995 vs. ExPASy Swiss-Prot
Match: CH10_PSEU5 (10 kDa chaperonin OS=Pseudomonas stutzeri (strain A1501) GN=groS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11 Identity = 34/94 (36.17%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 319 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTE-LEFNGANHLIVREDDVVGILE 594 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG G+ + ++ +VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEETKTAGGIVLPGSAAEKPNRGEVVAVGTGRVLDNGEVRAPAVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVIE 96
BLAST of FC929995 vs. ExPASy Swiss-Prot
Match: CH10_LEPCP (10 kDa chaperonin OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=groS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11 Identity = 36/92 (39.13%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 319 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 591 ++PL DRV+VK E KT GI +P A KP GEV+AVG GK K + ++V G +V++ KY+G ++ +G L++RE+D+ ++ Sbjct: 3 LRPLHDRVIVKRLEQETKTASGIVIPDNAAEKPDQGEVLAVGPGKRNDKGDFVALNVAVGDRVLFGKYSGQTVKVDGDELLVMREEDLFAVV 94
BLAST of FC929995 vs. ExPASy Swiss-Prot
Match: CH10_COLMA (10 kDa chaperonin OS=Colwellia maris GN=groS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.782e-11 Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 316 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELE-FNGANHLIVREDDVVGILE 594 SI+PL DRV+VK K E K++GGI L +A K EV+AVG G+ + ++ + VK G QVI+S+ G + E +G LI+ E D++ I+E Sbjct: 2 SIRPLHDRVIVKRKDAESKSEGGIVLMGSATEKSTRAEVIAVGNGRILENGEVRPLDVKVGDQVIFSEGYGVKTEKIDGEEVLILSESDILAIVE 96
BLAST of FC929995 vs. ExPASy Swiss-Prot
Match: CH10_WOLSU (10 kDa chaperonin OS=Wolinella succinogenes GN=groS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 37/93 (39.78%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 316 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 594 + KPLG RVLV+ + KT GI +P A+ KP G V A+ E V K L +K G+QV+++KY+GT+++ G +LI++ +D++G +E Sbjct: 2 NFKPLGQRVLVERLEEDTKTASGIIIPDNAKEKPLMGTVKALSE--EVAKEGL---LKAGSQVVFAKYSGTDVKLEGKEYLILKVEDLLGTIE 89
BLAST of FC929995 vs. ExPASy Swiss-Prot
Match: CH10_STRMU (10 kDa chaperonin OS=Streptococcus mutans GN=groS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 36/92 (39.13%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 319 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEG-KTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 591 +KPLGDRV+V++K +E+T GG L A+Q K + +VVAVGEG +T+ + S+ G ++ + GT ++ +G + LI+RE DV+ ++ Sbjct: 2 LKPLGDRVVVQLKEEKEQTVGGFVLAGASQEKTKKAQVVAVGEGVRTLTGELVASSLVQGDTILIENHVGTPVKDDGKDCLIIREADVLAVV 93
BLAST of FC929995 vs. ExPASy Swiss-Prot
Match: CH10_STAHJ (10 kDa chaperonin OS=Staphylococcus haemolyticus (strain JCSC1435) GN=groS PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 35/93 (37.63%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 319 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 594 +KPLG+RV+++ K E+ T GI L +A+ K G VVAVG G+ + K+ VK G +V++ +YAG+E++ +LI+ +D++ I+E Sbjct: 2 LKPLGNRVIIERKEQEQTTKSGIVLTDSAKEKSNEGIVVAVGTGRVLDNGEKVAPEVKEGDRVVFQEYAGSEVKRGDKTYLILNVEDLLAIIE 94
BLAST of FC929995 vs. ExPASy Swiss-Prot
Match: CH10_PSEPF (10 kDa chaperonin OS=Pseudomonas fluorescens (strain Pf0-1) GN=groS PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 319 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLIVREDDVVGILE 594 ++PL DRV+++ E+KT GGI LP +A K GE++AVG GK + ++ +SVK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEEKKTAGGIVLPGSAAEKANHGEILAVGPGKALESGEVRALSVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVIE 96
BLAST of FC929995 vs. ExPASy Swiss-Prot
Match: CH10_STAEP (10 kDa chaperonin OS=Staphylococcus epidermidis GN=groS PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 31/93 (33.33%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 319 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 594 +KPLG+RV+++ K E+ GI L +A+ K G ++AVG+G+ + ++ V G +++ +YAGTE++ +LI+ E+D++ I+E Sbjct: 2 LKPLGNRVIIEKKEQEQAAKSGIVLTDSAKEKSNEGVIIAVGQGRLLDNGTQVAPQVSEGDTIVFQQYAGTEVKRGAQTYLILNEEDILAIIE 94 The following BLAST results are available for this feature:
BLAST of FC929995 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 489
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929995 ID=FC929995; Name=FC929995; organism=Citrus clementina; type=EST; length=685bpback to top |