FC930006
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: YFBQ_SHIFL (Uncharacterized aminotransferase yfbQ OS=Shigella flexneri GN=yfbQ PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.268e-19 Identity = 50/165 (30.30%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 18 VSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 512 V+ D+++ +G ++ I AM L G +L+P P +P++ + + + H+ W DLDDI + T +VIINP NP G VYS + L ++ E A + ++ ADE+Y +++ D + + +T LSK + V G+R GW V P Sbjct: 93 VTVEDIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGP 257
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: YFBQ_ECOLI (Uncharacterized aminotransferase yfbQ OS=Escherichia coli (strain K12) GN=yfbQ PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.268e-19 Identity = 50/165 (30.30%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 18 VSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 512 V+ D+++ +G ++ I AM L G +L+P P +P++ + + + H+ W DLDDI + T +VIINP NP G VYS + L ++ E A + ++ ADE+Y +++ D + + +T LSK + V G+R GW V P Sbjct: 93 VTVEDIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGP 257
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: YFBQ_ECOL6 (Uncharacterized aminotransferase yfbQ OS=Escherichia coli O6 GN=yfbQ PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.268e-19 Identity = 50/165 (30.30%), Postives = 83/165 (50.30%), Query Frame = 3 Query: 18 VSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDP 512 V+ D+++ +G ++ I AM L G +L+P P +P++ + + + H+ W DLDDI + T +VIINP NP G VYS + L ++ E A + ++ ADE+Y +++ D + + +T LSK + V G+R GW V P Sbjct: 93 VTVEDIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGP 257
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: AAT1_METJA (Probable aspartate aminotransferase 1 OS=Methanocaldococcus jannaschii GN=MJ0001 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 45/167 (26.95%), Postives = 89/167 (53.29%), Query Frame = 3 Query: 9 SLQVSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 509 +L V +++ VT G ++A+ +++ L G +L+P P F Y F ++++ DL D+ + +DL+ ++ + T ++ +P NP G VY + ++ LAE A ++++DEVY +++ K + PM T + + SK + + GWR+G+ +D Sbjct: 78 NLDVDKDNIIVTCGASEALMLSIMTLIDRGDEVLIPNPSFVSYFSLTEFAEGKIKNIDL--DENFNIDLEKVKESITKKTKLIIFNSPSNPTGKVYDKETIKGLAEIAEDYNLIIVSDEVYDKIIYDKKHYSPMQF---TDRCILINGFSKTYAMTGWRIGYLAVSD 239
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: AAT_AQUAE (Aspartate aminotransferase OS=Aquifex aeolicus GN=aspC PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 47/165 (28.48%), Postives = 84/165 (50.91%), Query Frame = 3 Query: 6 SSLQVSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGW 494 + ++ P+++ V++G + + + G +LLP P + Y F L +KG+++ L+D++ + T A+VI +P NP G VY + L+K+AE + +I+DE Y + V+GD FV F V T+ + SK + + GWR+G+ Sbjct: 86 NKVEYKPSEIVVSAGAKMVLFLIFMAILDEGDEVLLPSPYWVTYPEQIRFFGGVPVEVPLKKEKGFQLSLEDVKEKVTERTKAIVINSPNNPTGAVYEEEELKKIAEFCVERGIFIISDECYEYFVYGDAKFVSPASFSDEVKNITFTVNAFSKSYSMTGWRIGY 250
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: AAT_STRVG (Aspartate aminotransferase OS=Streptomyces virginiae GN=aspC PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.985e-16 Identity = 49/169 (28.99%), Postives = 88/169 (52.07%), Query Frame = 3 Query: 6 SSLQVSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDK--GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTV--PILTLGSLSKRWIVPGWRLGWFV 500 S +V + V VT+G QAI A A + PG +++P P + Y S R D++ D+ G+ V ++ +E+ + T ++ ++P NP G+VYS + + E A + V+ DE+Y HLV+G+ F + V + + + ++K + + GWR+GW + Sbjct: 83 SGYEVEASQVLVTNGGKQAIYEAFAAILDPGDEVIVPAPYWTTYPES--IRLAGGVPVDVVADETTGYRVSVEQLEAARTERTKVVLFVSPSNPTGSVYSEADAKAIGEWAAEHGLWVLTDEIYEHLVYGEAKFTSLPVLVPALRDKCIIVNGVAKTYAMTGWRVGWVI 249
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: ALAM_YEAST (Probable alanine aminotransferase, mitochondrial OS=Saccharomyces cerevisiae GN=ALT1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16 Identity = 47/136 (34.56%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 24 PNDVFVTSGCTQAIDVAMALLSR-PGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESL---ADQNTV---ALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM 410 P D+F+T+G + A++ +++ R P +L+P P +P+Y + A + + + L + GW + ++IE++ A QN + LV+INPGNP G V S + + ++ E A K T+VIADEVY +F F M Sbjct: 249 PEDIFLTAGASAAVNYLLSIFCRGPETGVLIPIPQYPLYTATLALNNSQALPYYLDENSGWSTNPEEIETVVKEAIQNEIKPTVLVVINPGNPTGAVLSPESIAQIFEVAAKYGTVVIADEVYQENIFPGTKFHSM 384
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: AAT_PYRAB (Aspartate aminotransferase OS=Pyrococcus abyssi GN=aspC PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.450e-15 Identity = 56/211 (26.54%), Postives = 107/211 (50.71%), Query Frame = 3 Query: 6 SSLQVSPN-DVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE---LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGD-KPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGD-PATFIQAAVPSILQ 620 ++++ PN ++ V G QA + ++ + G +L+P P F Y + A + +EV ++ + + +++D+++ + T AL+I +P NP G+V + L+++A+ A + +VI+DEVY H ++ D K + + G +T+ SK + + GWRLG+ ++E+M K+ P TFIQ A L+ Sbjct: 80 NNIEADPNKEIMVLVGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYE---ENEFRLNVDELKKYVTEKTKALIINSPCNPTGSVLKKKDLEEIADFAVEHDLIVISDEVYEHFIYDDVKHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS--------WIIEKMVKFQMYNATCPVTFIQYAAAKALR 279
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: AAT_THEMA (Aspartate aminotransferase OS=Thermotoga maritima GN=aspC PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14 Identity = 48/164 (29.27%), Postives = 81/164 (49.39%), Query Frame = 3 Query: 18 VSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTD 509 +SP+ V VT+G QA+ A L PG +++ P + Y V + K ++ L+++E L T A++I +P NP G VY + L+ L A K +I+DEVY LV+ D+ + V I+ + SK + GWR+G+ ++++ Sbjct: 87 ISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSE 250
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: HIS8_HALLT (Histidinol-phosphate aminotransferase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=hisC PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13 Identity = 50/167 (29.94%), Postives = 81/167 (48.50%), Query Frame = 3 Query: 18 VSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCG 518 VS V+V+ G +ID PG +L+P PGF Y +SA + H EV + L PD G+ D + + S + + + +P NP G+V ++ +A+ A +TLV+ DE YG D +P+ + L + SK + + G R+G+ V + G Sbjct: 80 VSTEQVWVSPGADGSIDYLSRAALEPGDEVLVPEPGFAYYAMSARYHHGEVSEYALSPDDGFAQDAETVLSAYGGERI-VYLTSPHNPSGSVMPLDEVRAIAD-ATAEETLVVVDEAYGEFAEVDSA-IPL--VDERDDVAVLRTFSKAYGLAGLRIGYSVVPEAWG 241 The following BLAST results are available for this feature:
BLAST of FC930006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930006 ID=FC930006; Name=FC930006; organism=Citrus clementina; type=EST; length=694bpback to top |