FC930011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.567e-19 Identity = 56/163 (34.36%), Postives = 87/163 (53.37%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK----KDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRED---TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++HP VT A+L E FS GP+ ++ + + Y ++++ A A+ T+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F +V + SRGFGFV F E AQ AIN +NG L +R++ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV 168 HSP 2 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 56/206 (27.18%), Postives = 95/206 (46.12%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXKGATSGDEKQVQIPKC----CRAYNGIS 706 P S ++++ N+ + N L + FS+ G + CK+ + S +GFV + +A AI T+NG + + + V + +RE G N++V +L +V + L FS F +VM +G SR FGFV+F E+AQ A+ +NGK + R + A K +E + + + R Y G++ Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVM-RDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVN 295 HSP 3 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 45/174 (25.86%), Postives = 85/174 (48.85%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 ++YV N+ V LQ++FS G + K+++ + +GFV++ A A+V +NG+ + G+ + A +R++ N++V +L + D L FS + + A+VM + G S+GFGFV F + E+A A+ ++NG+ +G + + Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP_KLULA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Kluyveromyces lactis GN=PAB1 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18 Identity = 54/163 (33.13%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG + P +T ALL +VFS GP+ ++ + K Y +V+Y D + AI LN I G+P ++ W S+R+ G N+F+ +L P + + L FS F +V + G SRGFGFV F+ + DA+ AI +NG + ++ Sbjct: 51 SLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQELNYAEINGRPCRIMW----SERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDEN-GNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEV 208 HSP 2 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 49/182 (26.92%), Postives = 85/182 (46.70%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXKGATSGDEKQVQ 670 ++++ N+HP + N L E FS+ G + CK+ + + +GFV + + A AI +NG + G + V R E+ +F N++V ++ E TD FS + A + G+ +GFGFV+F + A A+ +LNGK ++ + A K +E + Q Sbjct: 139 NIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLEEAKANFTNIYVKNIDVETTDEEFEQLFSQYGEIVSA-ALEKDAEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELKKQ 319 HSP 3 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 49/165 (29.70%), Postives = 81/165 (49.09%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR-EDTSGHF--------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLN 589 ++YV NI + T+ +++FS G + L K + +GFV++ D +AA A+ LNG+ Q + V A +R E+ + N+F+ +L + D L F+ + T + ARVM Q+ G S+GFGFV F + E+A A+ + N Sbjct: 232 NIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEKLKEEFAPYGTITSARVMRDQE-GNSKGFGFVCFSSPEEATKAMTEKN 395
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18 Identity = 55/171 (32.16%), Postives = 98/171 (57.31%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD----KSSYGFVDYFDRRSAALAIVTLNGRHIFGQP--IKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 631 ++++G + P VT A +Q+V+++ G KLI+ + Y FV++ A+ A+ ++N + I G K+NWA RE + + +++FVGDLSP V + +++ F S + +C A++M +T SRG+GFV F ++ D +SA+ ++ G+ G+R IR A Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLA 263
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABPB_XENLA (Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-B PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18 Identity = 54/163 (33.13%), Postives = 90/163 (55.21%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F +V+ + S+G+GFV F QE A+ AI+ +NG L +R++ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKV 168 HSP 2 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 54/179 (30.17%), Postives = 87/179 (48.60%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI +NG + + + V + +RE G NV++ + ++ D L F + +VM G+SRGFGFVSF EDAQ A++D+NGK L + I A K Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQK 268
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 54/163 (33.13%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F +V+ + S+G+GFV F QE A+ AI +NG L +R++ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168 HSP 2 Score: 86.2705 bits (212), Expect = 1.786e-16 Identity = 54/179 (30.17%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI +NG + + + V + +RE G NV++ + ++ D L F F +VM + +G+S+GFGFVSF EDAQ A++++NGK L +QI A K Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 HSP 3 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 47/174 (27.01%), Postives = 82/174 (47.13%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 +VY+ N + + L+E+F GP K++ + +GFV + A A+ +NG+ + G+ I V A +R+ N++V +L + D L FS F T + A+VM + GRS+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 54/163 (33.13%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F +V+ + S+G+GFV F QE A+ AI +NG L +R++ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168 HSP 2 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 54/179 (30.17%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI +NG + + + V + +RE G NV++ + ++ D L F F +VM + +G+S+GFGFVSF EDAQ A++++NGK L +QI A K Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 HSP 3 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 47/174 (27.01%), Postives = 82/174 (47.13%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 +VY+ N + + L+E+F GP K++ + +GFV + A A+ +NG+ + G+ I V A +R+ N++V +L + D L FS F T + A+VM + GRS+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 54/163 (33.13%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F +V+ + S+G+GFV F QE A+ AI +NG L +R++ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168 HSP 2 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 54/179 (30.17%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI +NG + + + V + +RE G NV++ + ++ D L F F +VM + +G+S+GFGFVSF EDAQ A++++NGK L +QI A K Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 HSP 3 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 46/174 (26.44%), Postives = 82/174 (47.13%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 +VY+ N + + L+++F GP K++ + +GFV + A A+ +NG+ + G+ I V A +R+ N++V +L + D L FS F T + A+VM + GRS+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 54/163 (33.13%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F +V+ + S+G+GFV F QE A+ AI +NG L +R++ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168 HSP 2 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 54/179 (30.17%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI +NG + + + V + +RE G NV++ + ++ D L F F +VM + +G+S+GFGFVSF EDAQ A++++NGK L +QI A K Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 HSP 3 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 46/174 (26.44%), Postives = 82/174 (47.13%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 +VY+ N + + L+++F GP K++ + +GFV + A A+ +NG+ + G+ I V A +R+ N++V +L + D L FS F T + A+VM + GRS+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18 Identity = 58/163 (35.58%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKS-SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRED---TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++HP VT A+L E FS GP+ C+ I +S Y ++++ A A+ T+N I G+PI++ W SQR+ SG NVF+ +L + + L+ FS F +V+ + SRG+GFV F QE A AI +NG L +R++ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMW----SQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEH--GSRGYGFVHFETQEAANRAIQTMNGMLLNDRKV 168 HSP 2 Score: 88.5817 bits (218), Expect = 3.599e-17 Identity = 57/179 (31.84%), Postives = 91/179 (50.84%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 P S +V++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI T+NG + + + V + +RE G NV++ + ++ D L FS F +VM TGRSRGFGFV++ N E+AQ A++++NGK + R I A K Sbjct: 91 PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQK 268 HSP 3 Score: 69.707 bits (169), Expect = 1.730e-11 Identity = 47/174 (27.01%), Postives = 84/174 (48.28%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 +VY+ N + + L+E+FS+ G K++ D +GFV+Y + A A+ +NG+ + G+ I V A +R+ N++V +L + D L FS + T + A+VM + G S+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: SAP49_SCHPO (Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe GN=sap49 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 54/181 (29.83%), Postives = 97/181 (53.59%), Query Frame = 2 Query: 125 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXKGATSGD 655 R D + ++Y+GN+ +VT+++L E+ GP+ + ++ + +GF ++ + A LN +FG+PI+VN A + + +T N+FVG+L P V + L+ FS A + + GRS+G+GFVS+ + E A +AI +N ++L N+ I ++A K G+ Sbjct: 4 REDRNQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQILNQVKLFGKPIRVNRA-SQDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKGE 183 The following BLAST results are available for this feature:
BLAST of FC930011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930011 ID=FC930011; Name=FC930011; organism=Citrus clementina; type=EST; length=707bpback to top |