FC930011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: NAM8_YEAST (Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 65/203 (32.02%), Postives = 103/203 (50.74%), Query Frame = 2 Query: 110 GNLPPRFDASTCRSVYVG------NIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQP---IKVNWAYASSQREDTS-------GHFNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXKGATSGDEKQV 667 G+L P +D +T R ++ N+ N L SS GP K+ Y FVD+ AA A++ NG I P +K+NWA +S + S + ++FVGDL+P VT++ LF F + + + S A+++ Q TG S+G+GFV F N ++ Q A++++ G +L R I+ G TSG ++ V Sbjct: 59 GDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNGSRSSMGP--------KNNQGYCFVDFPSSTHAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAIKV-----GPTSGQQQHV 247
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.237e-17 Identity = 57/163 (34.97%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKS-SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRED---TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+Y+G++HP VT A+L E FS GP+ C+ I +S SY ++++ A A+ T+N I G+PI++ W SQR+ SG NVF+ +L + + L+ FS F +V+ + SRG+GFV F E A AI +NG L +R++ Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMW----SQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEH--GSRGYGFVHFETHEAANRAIQTMNGMLLNDRKV 168 HSP 2 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 56/179 (31.28%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 P S +V++ N+ + N L + FS+ G + CK++ + S YGFV + +A AI T+NG + + + V + +RE G NV++ + ++ D L FS F +VM +GRSRGFGFV++ N E+AQ A++++NGK + R I A K Sbjct: 91 PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQK 268 HSP 3 Score: 68.1662 bits (165), Expect = 5.034e-11 Identity = 46/174 (26.44%), Postives = 83/174 (47.70%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 +VY+ N + + L+E+FS+ G K++ D +GFV+Y + A A+ +NG+ + G+ I V A +R+ N++V +L + D L F + T + A+VM + G S+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 55/163 (33.74%), Postives = 87/163 (53.37%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++HP VT A+L E FS GP+ + LI S+Y +V++ + A A+ T+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F V+ + S+G+GFV F E A+ AI +NG L R++ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKV 168 HSP 2 Score: 83.9593 bits (206), Expect = 8.866e-16 Identity = 54/179 (30.17%), Postives = 88/179 (49.16%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHF-----NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 P S +++V N+ + N L + S+ G + C ++ + S YGFV + +A AI +NG + G+ + V + +RE G NV++ + ++ D L F F +VM + +G+S+GFGFVSF EDAQ A++++NGK L +QI A K Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 HSP 3 Score: 70.4774 bits (171), Expect = 1.014e-11 Identity = 46/174 (26.44%), Postives = 82/174 (47.13%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 +VY+ N + + L+++F GP K++ + +GFV + A A+ +NG+ + G+ I V A +R+ N++V +L + D L FS F T + A+VM + GRS+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17 Identity = 57/163 (34.97%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKS-SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRED---TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+Y+G++HP VT A+L E FS GP+ C+ I +S Y ++++ A A+ T+N I G+PI++ W SQR+ SG NVF+ +L + + L+ FS F +V+ + SRG+GFV F QE A AI +NG L +R++ Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMW----SQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEY--GSRGYGFVHFETQEAANRAIQTMNGMLLNDRKV 168 HSP 2 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 55/179 (30.73%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 P S +V++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI T+NG + + + V + +RE G NV++ + ++ D L FS F +VM +GRSRGFGFV++ N E+AQ A+ ++NGK + R + A K Sbjct: 91 PGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMM-DNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQK 268
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17 Identity = 55/163 (33.74%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++ P V+ A L ++FS G + ++ I K Y +V++ D +A AI LN I G+ ++ W SQR+ + G N+F+ +L P++ + L+ FSVF ++V + TG+S+GFG+V F E A AI+ LNG L ++I Sbjct: 36 SLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMW----SQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDE-TGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEI 193 HSP 2 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 48/171 (28.07%), Postives = 83/171 (48.54%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 ++++ N+HP + N L + FS G + K+ + +G+V + + SA+ AI LNG + GQ I V + +RE + NV++ +++ E TD + F +D+ V+ G ++GFGFV+F N EDA + +LN + + N A K Sbjct: 124 NIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELVAKFGK-TDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQK 293
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17 Identity = 53/163 (32.52%), Postives = 88/163 (53.99%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++HP T A+L E FS GP+ + +I + Y +V++ A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F +V+ + S+G+GFV F QE A+ AI +NG L +R++ Sbjct: 12 SLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168 HSP 2 Score: 85.8853 bits (211), Expect = 2.333e-16 Identity = 54/179 (30.17%), Postives = 90/179 (50.28%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI +NG + + + V + +RE G NV++ + ++ D L F F +VM + +G+S+GFGFVSF EDAQ A++++NGK L +QI A K Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 HSP 3 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 46/174 (26.44%), Postives = 82/174 (47.13%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 +VY+ N + + L+++F GP K++ + +GFV + A A+ +NG+ + G+ I V A +R+ N++V +L + D L FS F T + A+VM + GRS+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-A PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17 Identity = 53/163 (32.52%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++H VT A+L E FS GP+ + +I + Y +V++ A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F +V+ + S+G+GFV F QE A+ AI+ +NG L +R++ Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKV 168 HSP 2 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 50/179 (27.93%), Postives = 87/179 (48.60%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI +NG + + + V + +RE G NV++ + ++ D L F + +VM G+S+GFGFVSF EDAQ A++++NGK + + + A K Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDN-GKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQK 268 HSP 3 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 46/174 (26.44%), Postives = 81/174 (46.55%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 +VY+ N + + L+E+F GP K++ D +GFV + A A+ +NG+ + G+ + V A +R+ N++V +L + D L F F T + A+VM + GRS+GFGFV F + E+A A+ ++NG+ + + + Sbjct: 192 NVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVM--MEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP_ASHGO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya gossypii GN=PAB1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.140e-17 Identity = 55/181 (30.39%), Postives = 94/181 (51.93%), Query Frame = 2 Query: 89 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 Q P + + P+ + S S+YVG + P V+ ALL ++FS G + ++ I Y +V++ D + AI LN I G+P ++ W+ S R+ SG N+++ +L P + + +L FS F +V + G SRGFGFV F N+ DA+ AI ++G + ++++ Sbjct: 20 QTAPTTTESETPKVETSGA-SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQLNYTLIKGKPCRIMWSQRDPSLRKKGSG--NIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDEN-GVSRGFGFVHFENESDARDAIEAVDGMLMNDQEV 196 HSP 2 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 52/165 (31.52%), Postives = 79/165 (47.88%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA-------------YASSQREDTSGH--FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLN 589 +VYV NI + + +E+F G + L K + +GFV++ D +AA A+ LN GQ + V A Y +++ E + + N+FV +L + D L F+ F T + A+VM +TG SRGFGFV F E+A AI + N Sbjct: 220 NVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDELNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSIDDEKLKEEFAPFGTITSAKVM-RDETGNSRGFGFVCFSTPEEATKAITEKN 383
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 54/163 (33.13%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++H VT A+L E FS GP+ + +I + Y +V++ A A+ T+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F +V+ + S+G+ FV F QE A AI +NG L +R++ Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKV 168 HSP 2 Score: 79.337 bits (194), Expect = 2.184e-14 Identity = 53/179 (29.61%), Postives = 86/179 (48.04%), Query Frame = 2 Query: 122 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +A AI +NG + + + V + +RE G NV++ + EV D +L FS F +VM G+S+GFGFVS+ EDA A+ ++NGK + + I A K Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVM-RDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268 HSP 3 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 50/174 (28.74%), Postives = 87/174 (50.00%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE-DTSGHF--------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 +VY+ N +V + L+E+FS G K+++ +GFV Y A A+ +NG+ I G+ I V A +R+ + F N+++ +L + D L FS F + + A+VM + GRS+GFGFV F + E+A A+ ++NG+ +G++ + Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 52/161 (32.30%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616 S+YVG++ P V+ A L ++FS G + ++ I K Y +V++ D + AI LN I G+ ++ W+ S R+ SG N+F+ +L P++ + L+ FSVF +++ + G+S+GFGFV F + A+ AI+ LNG L ++I Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSG--NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDEN-GKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEI 196 HSP 2 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 50/171 (29.24%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKV----NWAYASSQREDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637 ++++ N+HP + N L + FS G + K+ + +GFV + + +A AI LNG + GQ I V + SQ E+T H+ N++V +++ E TD F+ F A + G+ +GFGFV++ EDA A+ LN L ++ A K Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLE-KDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQK 296 HSP 3 Score: 68.9366 bits (167), Expect = 2.951e-11 Identity = 50/165 (30.30%), Postives = 79/165 (47.88%), Query Frame = 2 Query: 149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR-------------EDTSGH--FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLN 589 ++YV NI+ + T+ QE+F+ GP+ L K +GFV+Y A A+ LN + G+ + V A ++R E + + N+FV +L V D L F+ + T + A+VM + G+S+GFGFV F E+A AI + N Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVM-RTENGKSKGFGFVCFSTPEEATKAITEKN 383 The following BLAST results are available for this feature:
BLAST of FC930011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930011 ID=FC930011; Name=FC930011; organism=Citrus clementina; type=EST; length=707bpback to top |