FC930011

Overview
NameFC930011
Unique NameFC930011
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 53/185 (28.65%), Postives = 91/185 (49.19%), Query Frame = 2
Query:   83 APQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616
            AP++  + S   P      +  S+YVG + P VT A+L E+FSS G +   ++    + +    Y +V+Y +      A+  LN   I G+P ++ W    SQR+     +G  NVF+ +L   + +  L   F+ F      +V    + G S+G+GFV +   E A +AI  +NG  L ++++
Sbjct:   29 APEVTAVESTTAPNASQPHSA-SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMW----SQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVA-QDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 207          

HSP 2 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 53/198 (26.77%), Postives = 99/198 (50.00%), Query Frame = 2
Query:  149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXKGATSGDE--KQVQIPKCCRA--YNGIS 706
            +V++ N+   + N  L + F++ G +  CK+ + +      YGFV Y    +A  AI  +NG  +  + + V    +   R    E+   +F NV++ ++  +VT+      F  F   + A +   Q+ G+SRGFGFV+F   E AQ+A++++N K +  +++    A K     +E  KQ +  +  +A  Y G++
Sbjct:  138 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVN 334          
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PAB4L_HUMAN (Polyadenylate-binding protein 4-like OS=Homo sapiens GN=PABPC4L PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 53/158 (33.54%), Postives = 84/158 (53.16%), Query Frame = 2
Query:  149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 601
            S+YVG++H  VT  LL   FS+ GP+   ++    + +    Y +V++     A  A+ T+N   I G+ I++ W    SQR+     SG  NVF+ +L   + + TL+  FS F     ++VM   +   S+G+ FV F+NQ  A  AI ++NGK L
Sbjct:   11 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMW----SQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQ--GSKGYAFVHFQNQSAADRAIEEMNGKLL 162          

HSP 2 Score: 70.8626 bits (172), Expect = 7.767e-12
Identity = 54/182 (29.67%), Postives = 87/182 (47.80%), Query Frame = 2
Query:  125 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA-------------YASSQREDTSGHFNV--FVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616
            R  AS   +VY+ N    + +  L++VFS  G     K++         +GFV +    +A  A+  +NGR I GQ I V  A             +   +RE   G   V  ++ +L   + D  L   FS F + S  +VM  Q+ G+S+GFG + F + EDA  A+ ++NG+ LG++ +
Sbjct:  183 RSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVM--QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPL 362          

HSP 3 Score: 70.4774 bits (171), Expect = 1.014e-11
Identity = 49/170 (28.82%), Postives = 85/170 (50.00%), Query Frame = 2
Query:  149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE-----DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637
            +V++ N+   + N  L E FS+ G +   K++  D+ S  Y FV + ++ +A  AI  +NG+ + G  + V        RE       S   NV++ +   ++ D  L   FS +      +VM    +G+S+GFGFVSF + E A+ A+ ++NG+ +  + I    A K
Sbjct:   99 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMT-DSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQK 267          
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: ELAV4_RAT (ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 2
Query:  164 NIHPQ-VTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 595
            N  PQ +T    + +F S G +E CKL++         YGFV+Y D + A  AI TLNG  +  + IKV++A  SS     +   N++V  L   +T   L   FS +     +R++  Q TG SRG GF+ F  + +A+ AI  LNG+
Sbjct:   44 NYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 189          
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: ELAV4_MOUSE (ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 2
Query:  164 NIHPQ-VTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 595
            N  PQ +T    + +F S G +E CKL++         YGFV+Y D + A  AI TLNG  +  + IKV++A  SS     +   N++V  L   +T   L   FS +     +R++  Q TG SRG GF+ F  + +A+ AI  LNG+
Sbjct:   56 NYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 201          
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: ELAV4_HUMAN (ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14
Identity = 53/149 (35.57%), Postives = 78/149 (52.35%), Query Frame = 2
Query:  164 NIHPQ-VTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 595
            N  PQ +T    + +F S G +E CKL++         YGFV+Y D + A  AI TLNG  +  + IKV++A  SS     +   N++V  L   +T   L   FS +     +R++  Q TG SRG GF+ F  + +A+ AI  LNG+
Sbjct:   51 NYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 196          
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 50/163 (30.67%), Postives = 84/163 (51.53%), Query Frame = 2
Query:  149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616
            S+YVG + P VT A+L E+FSS G +   ++    + +    Y +V+Y +      A+  LN   I G+P ++ W    SQR+     +G  NVF+ +L   + +  L   F+ F      +V    + G S+G+GFV +   E AQ+AI  +NG  L ++++
Sbjct:   56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMW----SQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVA-QDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKV 213          

HSP 2 Score: 70.8626 bits (172), Expect = 7.767e-12
Identity = 52/198 (26.26%), Postives = 96/198 (48.48%), Query Frame = 2
Query:  149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXKGATSGDE--KQVQIPKCCRA--YNGIS 706
            +V++ N+   + N  L + F++ G +  CK+ + +      YGFV Y    +A  AI  +NG  +  + + V    A   R    E+   +F NV+V ++  + T+      F  F   + A +    ++G+SRGFGFV+F + ++A +A+  LN K    +++    A K     +E  KQ +  +  +A  Y G++
Sbjct:  144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVN 341          
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 53/188 (28.19%), Postives = 92/188 (48.94%), Query Frame = 2
Query:   80 AAPQIEPILSGN--LPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616
            +AP++  + S +    P        S+YVG + P VT A+L E+FSS G +   ++    + +    Y +V+Y +      A+  LN   I G+P ++ W    SQR+     +G  NVF+ +L   + +  L   F+ F      +V    + G S+G+GFV +   E A +AI  +NG  L ++++
Sbjct:   28 SAPEVTAVESASPSTTPSASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMW----SQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVA-QDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 210          

HSP 2 Score: 74.7146 bits (182), Expect = 5.379e-13
Identity = 54/198 (27.27%), Postives = 99/198 (50.00%), Query Frame = 2
Query:  149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXKGATSGDE--KQVQIPKCCRA--YNGIS 706
            +V++ N+   + N  L + F++ G +  CK+ + +      YGFV Y    +A  AI  +NG  +  + + V    +   R    E+   +F NV++ ++  EVTD      F  F   + A +   Q+ G+SRGFGFV+F   + AQ+A++++N K +  +++    A K     +E  KQ +  +  +A  Y G++
Sbjct:  141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVN 337          
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP_DEBHA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Debaryomyces hansenii GN=PAB1 PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 51/168 (30.36%), Postives = 85/168 (50.60%), Query Frame = 2
Query:  134 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616
            + T  S+YVG ++P V  ALL E+FS  G +   ++    + K    Y +V++        AI  LN   I G+P ++ W    SQR+ +   +G  N+F+ +L P + +  L   F+ F      +V      G S+ FGFV +   E A++AI ++NG  L +R++
Sbjct:   47 SDTSASLYVGELNPSVNEALLFEIFSPIGQVASIRVCRDAVTKKSLGYAYVNFHKFEDGEKAIEDLNYSLIEGRPCRIMW----SQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFTAFGKILSCKVA-TDDMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREV 209          

HSP 2 Score: 70.0922 bits (170), Expect = 1.325e-11
Identity = 43/171 (25.15%), Postives = 81/171 (47.37%), Query Frame = 2
Query:  149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXK 637
            ++++ N+HP + N  L + F++ G +  CK+   D      +GFV Y    +A  AI  +NG  +  + + V    +   RE       +   NV+  ++  + ++      F  +   +   +    + G+S+GFGFV+F N E A  A+++LN K +  ++I    A K
Sbjct:  140 NIFIKNLHPAIDNKALHDTFTAFGKILSCKVATDDMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESKFEEMKANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHE-GKSKGFGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQK 309          
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 53/188 (28.19%), Postives = 93/188 (49.47%), Query Frame = 2
Query:   80 AAPQIEPILSGN--LPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616
            +AP++  + S +   P   +     S+YVG + P VT A+L E+FSS G +   ++    + +    Y +V+Y +      A+  LN   I G+P ++ W    SQR+     +G  NVF+ +L   + +  L   F+ F      +V    + G S+G+GFV +   E A +AI  +NG  L ++++
Sbjct:   27 SAPEVTAVESSSPTSPNNNNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMW----SQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVA-QDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 209          

HSP 2 Score: 68.9366 bits (167), Expect = 2.951e-11
Identity = 48/198 (24.24%), Postives = 97/198 (48.99%), Query Frame = 2
Query:  149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXKGATSGDE--KQVQIPKCCRA--YNGIS 706
            +V++ N+   + N  L + F++ G +  CK+ + +      YGFV Y    +A  AI  +NG  +  + + V    +   R+       +   N+++ ++ P+VT+      F  F   + A +    + G+SRGFGFV++   E AQ+A+++++ K +  +++    A K     +E  KQ +  +  +A  Y G++
Sbjct:  140 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPE-GKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVN 336          
BLAST of FC930011 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 54/190 (28.42%), Postives = 90/190 (47.37%), Query Frame = 2
Query:   68 PSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 616
            P    AP++  +     P         S+YVG + P VT A+L E+FSS G +   ++    + +    Y +V+Y D      A+  LN   I G+P ++ W    SQR+     +G  NVF+ +L   + +  L   F+ F      +V    + G S+G+GFV +   E A +AI  +NG  L ++++
Sbjct:   19 PDNAPAPEVTAV---EAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMW----SQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVA-QDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 200          

HSP 2 Score: 73.9442 bits (180), Expect = 9.175e-13
Identity = 53/198 (26.77%), Postives = 98/198 (49.49%), Query Frame = 2
Query:  149 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWGQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAXKGATSGDE--KQVQIPKCCRA--YNGIS 706
            +V++ N+   + N  L + F++ G +  CK+ + +      YGFV Y    +A  AI  +NG  +  + + V    +   R    E+   +F N+++ ++ PEV D      F  F   + A +    + G+SRGFGFV+F   E AQ+A+ ++N K + ++++    A K     +E  KQ +  +  +A  Y G++
Sbjct:  131 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSE-GKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVN 327          
The following BLAST results are available for this feature:
BLAST of FC930011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
PABP_ASPOR1.280e-1428.65Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PAB4L_HUMAN1.280e-1433.54Polyadenylate-binding protein 4-like OS=Homo sapie... [more]
ELAV4_RAT1.280e-1435.57ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4... [more]
ELAV4_MOUSE1.280e-1435.57ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1... [more]
ELAV4_HUMAN1.280e-1435.57ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1... [more]
PABP_COCIM1.672e-1430.67Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_ASPFU1.672e-1428.19Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_DEBHA2.184e-1430.36Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_ASPCL2.184e-1428.19Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_EMENI2.852e-1428.42Polyadenylate-binding protein, cytoplasmic and nuc... [more]

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Properties
Property NameValue
Genbank descriptionC34002G12EF PostHarvC1 Citrus clementina cDNA clone C34002G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930011 ID=FC930011; Name=FC930011; organism=Citrus clementina; type=EST; length=707bp
GACGATGCAGCAGCATAGGCTGAAGCAACAAACAATGATGCAGCAGCAGT
CTTTATACCAATACCATCCCAGTCTCTTAGCTGCTCCTCAGATAGAGCCT
ATCTTGAGTGGAAATCTGCCTCCGCGATTTGATGCAAGTACATGCCGCAG
CGTGTATGTTGGAAACATTCATCCTCAGGTTACAAATGCCCTGCTTCAAG
AGGTTTTTTCAAGTACCGGTCCCCTTGAAGGATGCAAGCTCATTAAAAAA
GATAAGTCATCCTATGGCTTTGTGGACTACTTTGATCGCAGATCAGCTGC
CCTTGCAATTGTGACTCTTAATGGAAGGCACATATTTGGACAACCTATTA
AAGTAAACTGGGCTTATGCTAGCAGCCAGAGAGAGGACACATCAGGTCAT
TTCAACGTTTTTGTTGGTGATCTTAGCCCTGAAGTTACAGATGCTACTTT
GTTTGCGTGCTTCTCTGTGTTTCCTACTTGTTCGGATGCAAGGGTTATGT
GGGGCCAAAAGACTGGGCGTTCAAGGGGTTTTGGGTTTGTTTCTTTTCGG
AATCAGGAGGATGCCCAAAGTGCAATAAATGACTTAAATGGGAAGTGGCT
TGGTAATAGACAGATTCGGTGCAACTGGGCTGNCAAAGGTGCTACCTCTG
GTGATGAAAAGCAAGTTCAGATTCCAAAGTGTTGTAGAGCTTACAATGGA
ATATCTG
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