FC930012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: RFBF_SALTI (Glucose-1-phosphate cytidylyltransferase OS=Salmonella typhi GN=rfbF PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 51/184 (27.72%), Postives = 81/184 (44.02%), Query Frame = 1 Query: 163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQET---------EPLG-----------TAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKP 654 MKA+IL GG GTRL T+ PKP+VE KP++ H ++ G+ + ++ Y+ V+ + + + E EP T G L + + DD E F D +++ I+FHKAHG +A++ T P ++G + + G+V F EKP Sbjct: 1 MKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHMAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDD--EAFLFTYGDGVADLDIKATIDFHKAHGKKATL--TATFPPGRFGAL--DIQAGQVRSFQEKP 178
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GLMU_CLOD6 (Bifunctional protein glmU OS=Clostridium difficile (strain 630) GN=glmU PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 44/165 (26.67%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 157 ITMKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEK 651 + KA+IL G GTR++ PK + + K M+ H I+ K GV + V+ + ++ +V+ + KL +II + +TE LGT + +A++ + D+ ++ +I E + E+H + A+++ T+V P+ YG ++ ++ G + K VE+ Sbjct: 1 MNFKAIILAAGKGTRMKS---KYPKVIHKVCGKEMVNHIIDVSKKSGVKDTVVILGHEADVV-------KEKLAEEIIIAMQTEQLGTGHAVKMAKEYINDEDTIVVLCGDTPLIKEETLKRLFEYHIENKYHATVLTTRVGNPTGYGRIIRDKK-GDLLKIVEQ 154
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: EI2BG_RAT (Translation initiation factor eIF-2B subunit gamma OS=Rattus norvegicus GN=Eif2b3 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 42/143 (29.37%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 166 KALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSK 594 +A+++ G G+R+ LT S+PKPL+ NKP+I + + L+ VG EV++ +V EF+ KL I+C + +GTA L KL D VL D+I++ E+++ +A+ ++++ K E ++ Sbjct: 4 QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTT--KDVQKALCAEFKMKLKPDIVCIPDEADMGTADSLRHIYPKLKTDV----LVLGCDLITDVALHEVVDLFRAYDASLAMLMRKGQESTE 140
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: RFBF_SALTY (Glucose-1-phosphate cytidylyltransferase OS=Salmonella typhimurium GN=rfbF PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11 Identity = 51/184 (27.72%), Postives = 81/184 (44.02%), Query Frame = 1 Query: 163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQET---------EPLG-----------TAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKP 654 MKA+IL GG GTRL T+ PKP+VE KP++ H ++ G+ + ++ Y+ V+ + + + E EP T G L + + DD E F D +++ I+FHKAHG +A++ T P ++G + + G+V F EKP Sbjct: 1 MKAVILAGGLGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKGYVIKEYFANYFLHMSDVTFHMAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDD--EAFLFTYGDGVADLDIKATIDFHKAHGKKATL--TATFPPGRFGAL--DIRAGQVRSFQEKP 178
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: GLMU_META3 (Bifunctional protein glmU OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_0642 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11 Identity = 49/167 (29.34%), Postives = 86/167 (51.50%), Query Frame = 1 Query: 163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPM---ILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKP 654 M A+IL G GTRL PLT ++PKP++ P+ I+++I+ L V + L + Y+ E+++N K + KI ++T+ GT + +A++ + D F V+N D+I + ++ + I + +VD PS +GV+V + +E EKP Sbjct: 1 MDAVILCAGKGTRLMPLTENIPKPMLPVGGAPILERIINKIDKL----VENIYLIVKYEKEIIINHFKNND-----KIKFIEQTDIDGTGYAVLMAKNHISGD----FLVINGDIIFDDDLTNIVN----DDVKNIITLNEVDNPSNFGVIVVDNQNNIIE-LQEKP 149
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: EI2BG_HUMAN (Translation initiation factor eIF-2B subunit gamma OS=Homo sapiens GN=EIF2B3 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.223e-11 Identity = 40/137 (29.20%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 166 KALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTK 576 +A+++ G G+R+ LT S+PKPL+ NKP+I + + L+ VG EV++ +V EF+ K+ I+C + +GTA L KL D VL+ D+I++ E+++ +A+ ++++ K Sbjct: 4 QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVVTT--RDVQKALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPKLKTDV----LVLSCDLITDVALHEVVDLFRAYDASLAMLMRK 134
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: SPSI_BACSU (Spore coat polysaccharide biosynthesis protein spsI OS=Bacillus subtilis GN=spsI PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11 Identity = 50/166 (30.12%), Postives = 79/166 (47.59%), Query Frame = 1 Query: 163 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEF--EAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVTEESTGKVEKFVEKP 654 MK +IL GG G+RL PLT +V K L+ PMI I L+ G+ +++L Q E M F K +LG+ I + G + L+ A+ E F +L D I E E + G A +++ +VD+P ++G+ +E ++ +EKP Sbjct: 1 MKGVILAGGNGSRLMPLTKAVNKHLLPVGPYPMIYWSIMKLQEAGIKDILLI--SQKEHMPQFYKLLGNGEELGVTITYQVQPAASGISDGLSYAKR---FTKKESFILLLGDNIFEDSLKPYTERFEQQGKGAKVLLKEVDDPERFGIAEIDEKNKRIRSIIEKP 161
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: EI2BG_MACFA (Translation initiation factor eIF-2B subunit gamma OS=Macaca fascicularis GN=EIF2B3 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.903e-11 Identity = 40/137 (29.20%), Postives = 73/137 (53.28%), Query Frame = 1 Query: 166 KALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTK 576 +A+++ G G+R+ LT S+PKPL+ NKP+I + + L+ VG EV++ +V EF+ K+ I+C + +GTA L KL D VL+ D+I++ E+++ +A+ ++++ K Sbjct: 4 QAVVMAVGGGSRMTDLTSSIPKPLLPAGNKPLIWYPLNLLERVGFEEVIVVTT--RDVQKALCAEFKMKMKPDIVCIPDDADMGTADSLRYMYPKLKTDV----LVLSCDLITDVALHEVVDLFRAYDASLAMLMRK 134
BLAST of FC930012 vs. ExPASy Swiss-Prot
Match: EI2BG_BOVIN (Translation initiation factor eIF-2B subunit gamma OS=Bos taurus GN=EIF2B3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11 Identity = 42/142 (29.58%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 166 KALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALKAVGVTEVVLAI--NYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDE 585 +A+++ G G+R+ LT S+PKPL+ NKP+I + + L+ VG EV++ + Q + +F K K+ + I+C + +GTA L KL D VL+ D+I++ E+++ +AH ++++ K E Sbjct: 4 QAVVMAVGGGSRMTDLTSSIPKPLLPVGNKPLIWYPLNLLERVGFEEVIVITTKDVQKALCADFNK---MKMKLDIVCIPDEADMGTADSLRHIYQKLKTDV----LVLSCDLITDVALHEVVDLFRAHDASLAMLMRKGQE 138 The following BLAST results are available for this feature:
BLAST of FC930012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930012 ID=FC930012; Name=FC930012; organism=Citrus clementina; type=EST; length=699bpback to top |