FC930013

Overview
NameFC930013
Unique NameFC930013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 404.831 bits (1039), Expect = 2.288e-112
Identity = 193/209 (92.34%), Postives = 202/209 (96.65%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            METFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETC+KTN+VMVFGEITTKANV+YEKIVRDTCR IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRK+GTCPWLRPDGKTQVT EYYN+ GAMVPVRVHTVLISTQHDETVTNDEIAAD
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRDTCRTIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYYNDKGAMVPVRVHTVLISTQHDETVTNDEIAAD 209          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK2_ATRNU (S-adenosylmethionine synthetase 2 OS=Atriplex nummularia GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 404.445 bits (1038), Expect = 2.988e-112
Identity = 192/209 (91.87%), Postives = 204/209 (97.61%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            ++TFLFTSESVNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTNLVMVFGEITTKA+V+YEKIVR TCR+IGFVS DVGLDADNCKVLVYIEQQSPDIAQGVHGHLS+RPEEIGAGDQGHMFGYA+DETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVT EYYNENGAMVP+RVHTVLISTQHDETVTNDEIAAD
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKADVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLSRRPEEIGAGDQGHMFGYASDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAAD 213          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 404.445 bits (1038), Expect = 2.988e-112
Identity = 191/209 (91.39%), Postives = 203/209 (97.13%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            ++TFLFTSESVNEGHPDK+CDQISDA+LDACL QDP+SKVACETCTKTNLVMVFGEITTK NV+YEKIVR TCR+IGFVS DVGLDADNCKVLVYIEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVT EYYN+NGAMVP+RVHTVLISTQHDETVTNDEIAAD
Sbjct:    5 IDTFLFTSESVNEGHPDKMCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKGNVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAAD 213          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 404.06 bits (1037), Expect = 3.902e-112
Identity = 191/209 (91.39%), Postives = 203/209 (97.13%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            M+TFL+TSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETC+KTN+VMVFGEITTKANV+YEKIV  TCR+IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT+LGAKLTEVRKNGTCPWLRPDGKTQVT EYYN+ GAMVP+RVHTVLISTQHDETVTNDEIAAD
Sbjct:    1 MDTFLYTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVHKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAAD 209          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 403.675 bits (1036), Expect = 5.096e-112
Identity = 194/208 (93.27%), Postives = 200/208 (96.15%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            ETFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YEKIVRDTCRNIGF S DVGLDADNCKVLV IEQQSPDIAQGVHGH SKRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVT EYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 210          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 403.675 bits (1036), Expect = 5.096e-112
Identity = 194/208 (93.27%), Postives = 200/208 (96.15%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            ETFLFTSESVNEGHPDKLCDQISDA+LDACL QDPDSKVACETCTKTN+VMVFGEITTKA+V+YEKIVRDTCRNIGF S DVGLDADNCKVLV IEQQSPDIAQGVHGH SKRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVT EYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 210          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 403.675 bits (1036), Expect = 5.096e-112
Identity = 192/209 (91.87%), Postives = 203/209 (97.13%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            M+TFL TSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETC+KTN+VMVFGEITTKANV+YEKIVR TCR+IGFVSDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT+LGAKLTEVRKNGTCPWLRPDGKTQVT EYYN+ GAMVP+RVHTVLISTQHDETVTNDEIAAD
Sbjct:    1 MDTFLNTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMVMVFGEITTKANVDYEKIVRKTCRDIGFVSDDVGLDADNCKVLVQIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAAD 209          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK3_ATRNU (S-adenosylmethionine synthetase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 403.29 bits (1035), Expect = 6.656e-112
Identity = 192/209 (91.87%), Postives = 203/209 (97.13%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            ++TFLFTSESVNEGHPDKLCDQISDA+LDACL QDP+SKVACETCTKTNLVMVFGEITTKANV+YEKIVR TCR+IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHL++RPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVT EYYNENGAMVP+RVHTVLISTQHDETVTNDEIAAD
Sbjct:    5 VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTRRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAAD 213          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 1.483e-111
Identity = 191/209 (91.39%), Postives = 202/209 (96.65%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACL QDPDSKVACETCT+TN+VMVFGEITTKANV+YE+IVRDTCR+IGF SDDVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVT EYYN NGAMVPVRVHTVLISTQHDETVTNDEIAAD
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTRTNMVMVFGEITTKANVDYEQIVRDTCRSIGFTSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNGNGAMVPVRVHTVLISTQHDETVTNDEIAAD 209          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 1.483e-111
Identity = 191/209 (91.39%), Postives = 201/209 (96.17%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF+SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT++GAKLTEVRKNGTC WLRPDGKTQVT EYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA D
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIARD 209          
The following BLAST results are available for this feature:
BLAST of FC930013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_ELAUM2.288e-11292.34S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK2_ATRNU2.988e-11291.87S-adenosylmethionine synthetase 2 OS=Atriplex numm... [more]
METK1_BETVU2.988e-11291.39S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK1_DAUCA3.902e-11291.39S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK_POPDE5.096e-11293.27S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK3_POPTR5.096e-11293.27S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK2_DAUCA5.096e-11291.87S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK3_ATRNU6.656e-11291.87S-adenosylmethionine synthetase 3 OS=Atriplex numm... [more]
METK_LITCN1.483e-11191.39S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK_BRARP1.483e-11191.39S-adenosylmethionine synthetase OS=Brassica rapa s... [more]

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Properties
Property NameValue
Genbank descriptionC34002H02EF PostHarvC1 Citrus clementina cDNA clone C34002H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930013 ID=FC930013; Name=FC930013; organism=Citrus clementina; type=EST; length=711bp
ATTCCCCCCCTCTATTTCCTCTTTCTCTGGTCAGCTTTCTCTCAATTCTA
GATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTT
CACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGA
TCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAG
GTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGA
GATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTT
GCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAAC
TGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGG
CGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATC
AGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCT
CTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCG
AAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTA
CTGCTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCAC
ACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGAT
CGCTGCTGATT
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