FC930013

Overview
NameFC930013
Unique NameFC930013
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 5.635e-111
Identity = 190/209 (90.91%), Postives = 201/209 (96.17%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF+SDDVGLDAD CKVLV IEQQSPDIAQGVHGH +KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT++GAKLTEVRKNGTC WLRP+GKTQVT EYYN+NGAMVPVRVHTVLISTQHDETVTNDEIA D
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKIGAKLTEVRKNGTCRWLRPNGKTQVTGEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIARD 209          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK2_DIACA (S-adenosylmethionine synthetase 2 OS=Dianthus caryophyllus GN=SAM2 PE=2 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 5.635e-111
Identity = 191/208 (91.83%), Postives = 200/208 (96.15%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            +TFLFTSESVNEGHPDKLCDQISDA+LDACL QD +SKVACETCTKTNLVMVFGEITTKANV+YEKIV DTCR IGFVS DVGLDADNCKVLVYIEQQSPDIAQGVHGHL+KRPE+IGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVT EYYNENGAMVP+RVHTVLISTQHDETVTNDEIAAD
Sbjct:    6 DTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDAESKVACETCTKTNLVMVFGEITTKANVDYEKIVADTCREIGFVSPDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEDIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPIRVHTVLISTQHDETVTNDEIAAD 213          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 1.639e-110
Identity = 191/209 (91.39%), Postives = 202/209 (96.65%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            ME+FLFTSESVNEGHPDKLCDQISDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKANV+YE+IVR TCR IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEE+GAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKNGTCPWLRPDGKTQVT EY NE+GAMVPVRVHTVLISTQHDETVTNDEIAAD
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYINESGAMVPVRVHTVLISTQHDETVTNDEIAAD 209          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 398.667 bits (1023), Expect = 1.639e-110
Identity = 189/209 (90.43%), Postives = 201/209 (96.17%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACL QDP+SKVACETCTKTNLVMVFGEITTKAN++YEKIVRDTCR IGFVS DVGLDADNC+VLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVT EY+N+NGAMVP+RVHTVLISTQHDETVTNDEIA D
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTKANIDYEKIVRDTCREIGFVSPDVGLDADNCRVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCSWLRPDGKTQVTVEYHNDNGAMVPLRVHTVLISTQHDETVTNDEIARD 209          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 398.282 bits (1022), Expect = 2.141e-110
Identity = 189/209 (90.43%), Postives = 202/209 (96.65%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            M+TFLFTSESVNEGHPDKLCDQISDAILDACLEQDP+SKVACETCTKTN+VM+FGEITTKAN++YEKIVRDTCR IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGA+LTEVRK+GTCPWLRPDGKTQVT EY NE GAMVP+RVHTVLISTQHDETVTNDEIAAD
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMIFGEITTKANIDYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYKNEGGAMVPLRVHTVLISTQHDETVTNDEIAAD 209          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 2.796e-110
Identity = 189/209 (90.43%), Postives = 200/209 (95.69%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACL QDP+SKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR+IGF SDDVGLDAD CKVLV IEQQSPDIAQGVHGHL+KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNG C WLRPDGKTQVT EYYN+NGAMVPVRVHTVLISTQHDETV+NDEIAAD
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTKAEVDYEKIVRDTCRSIGFTSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVSNDEIAAD 209          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 397.512 bits (1020), Expect = 3.652e-110
Identity = 187/208 (89.90%), Postives = 201/208 (96.63%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            +TFLFTSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTK N++YEKIVRDTCR+IGF S+DVGLDAD+CKVLV IEQQSPDIAQGVHGH +KRPEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTCPWLRPDGKTQVT EY N++GAM+PVRVHTVLISTQHDETVTNDEIAAD
Sbjct:    3 DTFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKGNIDYEKIVRDTCRDIGFTSEDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYRNDHGAMIPVRVHTVLISTQHDETVTNDEIAAD 210          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 4.770e-110
Identity = 188/209 (89.95%), Postives = 200/209 (95.69%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            M+TFLFTSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKA VNYEKIVRDTCR IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKNGTCPWLRPDGKTQVT EY NE GAMVP+RVHTVL+STQHDETVTN++IA D
Sbjct:    1 MDTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYRNEGGAMVPIRVHTVLVSTQHDETVTNEQIAKD 209          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 396.741 bits (1018), Expect = 6.230e-110
Identity = 190/209 (90.91%), Postives = 198/209 (94.74%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            METFLFTSESVNEGHPDKLCDQISDA+LDACLEQDPDSKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR IGFVSDDVGLDAD CKVLV IEQQSPDIAQGVHGH +K PEEIGAGDQGHMFGYATDETPE MPLSHVLAT+LGA+LTEVRKNGTC WLRPDGKTQVT EYYN+ GAMVP+RVHTVLISTQHDETVTNDEIA D
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIARD 209          
BLAST of FC930013 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 8.136e-110
Identity = 189/209 (90.43%), Postives = 200/209 (95.69%), Query Frame = 3
Query:   84 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTAEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAAD 710
            METFLFTSESVNEGHPDKLCDQ+SDAILDACLEQDP+SKVACETCTKTN+VMVFGEITTKA V+YEKIVRDTCR IGFVS DVGLDADNCKVLV IEQQSPDIAQGVHGHL+K+PEEIGAGDQGHMFGYATDETPE MPL+HVLAT+LGAKLTEVRKN TCPWLRPDGKTQVT EY N+NGAMVP+RVHTVLISTQHDETVTND+IA D
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIAQD 209          
The following BLAST results are available for this feature:
BLAST of FC930013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_BRAJU5.635e-11190.91S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]
METK2_DIACA5.635e-11191.83S-adenosylmethionine synthetase 2 OS=Dianthus cary... [more]
METK4_ARATH1.639e-11091.39S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK2_SOLLC1.639e-11090.43S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]
METK1_PICSI2.141e-11090.43S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK2_BETVU2.796e-11090.43S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK_MUSAC3.652e-11089.90S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK1_VITVI4.770e-11089.95S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK1_ARATH6.230e-11090.91S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK3_SOLLC8.136e-11090.43S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]

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Properties
Property NameValue
Genbank descriptionC34002H02EF PostHarvC1 Citrus clementina cDNA clone C34002H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930013 ID=FC930013; Name=FC930013; organism=Citrus clementina; type=EST; length=711bp
ATTCCCCCCCTCTATTTCCTCTTTCTCTGGTCAGCTTTCTCTCAATTCTA
GATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTT
CACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGA
TCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAG
GTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGA
GATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTT
GCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAAC
TGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGG
CGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATC
AGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCT
CTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCG
AAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTA
CTGCTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCAC
ACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGATGAGAT
CGCTGCTGATT
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