FC930035

Overview
NameFC930035
Unique NameFC930035
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_SCHPO (Inorganic pyrophosphatase OS=Schizosaccharomyces pombe GN=ppa1 PE=2 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.182e-35
Identity = 76/163 (46.63%), Postives = 107/163 (65.64%), Query Frame = 2
Query:  257 EEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLG--DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDPRLP 724
            E G   TLDY+V+ V  +G  +S WHDIPL       + N VVEIP+ + AK+E+  +    PIKQD KKGKLR+    +P++   WNYG FPQT+EDP+  + E + A GD+DP+DV EIGE R   G++ +V+ L  +A++DEGE DWK++ I ++DP  P
Sbjct:    8 EVGALNTLDYQVY-VEKNGTPISSWHDIPLYANAEKTILNMVVEIPRWTQAKLEITKEATLNPIKQDTKKGKLRFVRNCFPHHGYIWNYGAFPQTYEDPNVVHPETK-AKGDSDPLDVCEIGEARGYTGQVKQVKVLGVMALLDEGETDWKVIVIDVNDPLAP 168          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_YARLI (Inorganic pyrophosphatase OS=Yarrowia lipolytica GN=IPP1 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.387e-34
Identity = 76/158 (48.10%), Postives = 105/158 (66.46%), Query Frame = 2
Query:  263 GQPETLDYRVFFVNNSGKKVSPWHDIPLQLG--DGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDP 715
            G P TLDY+V+ +   GK VS +HDIPL       + N +VE+P+ ++AKME++ D    PI QD KKGKLR+    +P++    NYG FPQTWEDP+  + E + A GDNDP+DV EIGE     G++ +V+ L  +A++DEGE DWKI+AI + DP
Sbjct:   10 GAPNTLDYKVY-IEKDGKPVSAFHDIPLYANAEKTILNMIVEVPRWTNAKMEISKDLALNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNHVHPETK-AKGDNDPLDVCEIGETVGYTGQVKQVKVLGVMALLDEGETDWKIIAIDVKDP 165          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_PICPA (Inorganic pyrophosphatase OS=Pichia pastoris GN=IPP1 PE=3 SV=3)

HSP 1 Score: 142.895 bits (359), Expect = 1.667e-33
Identity = 76/161 (47.20%), Postives = 108/161 (67.08%), Query Frame = 2
Query:  263 GQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDG--VFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDPRLP 724
            G   TL+ RVF +   G+ VSP+HDIPL   +   V N VVE+P+ ++AK+E++ +E   PI QD KKGKLR+    +P++    NYG FPQTWEDP+  + E + A GDNDP+DV EIGE R   G++ +V+ L  +A++DEGE DWK++ I ++DP  P
Sbjct:    9 GAANTLENRVF-IEKDGQVVSPFHDIPLYADESKKVLNMVVEVPRWTNAKLEISKEEKLNPILQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTWEDPNVTHPETK-AKGDNDPLDVCEIGE-RSYTGQVKQVKVLGVMALLDEGETDWKVIVIDINDPLAP 166          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR2_SCHPO (Putative inorganic pyrophosphatase C3A12.02 OS=Schizosaccharomyces pombe GN=SPAC3A12.02 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.844e-33
Identity = 75/157 (47.77%), Postives = 102/157 (64.97%), Query Frame = 2
Query:  263 GQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDPR 718
            G+  T D+RV+   N+ K +S +HD+PL      FN V EIP+ + AK E++    + PIKQD+K GKLRY    +PY+   WNYG  PQTWEDP+  +S  +   GD DP+DV EIG     IG+I +V+ L AL +ID+GE DWKI+AI ++DPR
Sbjct:   17 GKLNTPDFRVYCYKNN-KPISFFHDVPLTSDKDTFNMVTEIPRWTQAKCEISLTSPFHPIKQDLKNGKLRYVANSFPYHGFIWNYGALPQTWEDPNVIDSRTKMK-GDGDPLDVCEIGGSIGYIGQIKQVKVLGALGLIDQGETDWKILAIDINDPR 171          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_DICDI (Inorganic pyrophosphatase OS=Dictyostelium discoideum GN=ppa1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.411e-32
Identity = 74/166 (44.58%), Postives = 105/166 (63.25%), Query Frame = 2
Query:  230 IYNPQVQITEE--GQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDG--VFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDP 715
            IY+  +  T +  G+  +L+YR+FF+ ++ K VS +HD+PL +     + N +VEIP+ ++AK+E+AT E   PIKQD+K GKLR+      +NYG  PQTWE P   +    GA GDNDP+D  EIG  +   GE  +V+ L   AMID GE DWKI+ I ++DP
Sbjct:   17 IYHRNMTYTTKQVGETGSLEYRLFFLKDN-KPVSSFHDVPLWVNKEKQIVNMLVEIPRGTNAKLEIATKEYMNPIKQDVKDGKLRFVHDKYPFNYGALPQTWESPEHTHPST-GAKGDNDPLDACEIGSGQGVTGEFKQVKVLGVFAMIDAGETDWKILCIDVNDP 180          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_PLAF7 (Probable inorganic pyrophosphatase OS=Plasmodium falciparum (isolate 3D7) GN=PFC0710w PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.195e-31
Identity = 72/153 (47.06%), Postives = 96/153 (62.75%), Query Frame = 2
Query:  293 FFVNNSGKK------VSPWHDIPLQLGDGVFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDP-------SFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDD 712
            FF++   KK      +SPWH I L+  DG +N +VEI K +  K+E+   E +  IKQD KKGKLRYY  +I WNYG  PQT+E P       S  N E     GDNDP+D+++IG    KIG+++ V+ L A  +IDEGELDWKI+AI+ +D
Sbjct:   93 FFISYFEKKDDNFVPISPWHHIDLKNDDGTYNMIVEITKYNYIKLEIQLREKFNVIKQDKKKGKLRYYHNSIYWNYGALPQTYEYPKHIYQNKSKKNKEALLFTGDNDPLDILDIGSACLKIGQVVPVKILGAFTLIDEGELDWKIIAINKED 245          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_ENCCU (Inorganic pyrophosphatase OS=Encephalitozoon cuniculi GN=IPP1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.476e-31
Identity = 69/167 (41.32%), Postives = 104/167 (62.28%), Query Frame = 2
Query:  239 PQVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDG--VFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDPR 718
            P       G+  +  ++V+ V   GK VSP+HDIPL +     + + V EIP+  + K E+  +E + PIKQDIKKG  R+    +P     WNYG  PQTWE+P   +    GA GDNDP+DV+EIG +R+++GE+ + + L ++A++DEGE DWK+V I ++D +
Sbjct:    2 PAYSTVRVGKKYSPSFKVY-VTQDGKIVSPFHDIPLYMSGNREIVSVVNEIPRFENGKFEINKEEAFNPIKQDIKKGWPRFVKNVFPMKGYLWNYGALPQTWENPHEVDRHT-GARGDNDPLDVIEIGRKRKEVGEVYQAKVLGSIALVDEGECDWKVVVIDVNDEK 166          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR2_YEAST (Inorganic pyrophosphatase, mitochondrial OS=Saccharomyces cerevisiae GN=IPP2 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.977e-27
Identity = 65/168 (38.69%), Postives = 103/168 (61.31%), Query Frame = 2
Query:  242 QVQITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDG--VFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRY----YPYN-INWNYGLFPQTWEDPSFANS--EVEGAF-GDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDP 715
            Q    ++G   TL ++ +    +G+  S +HD+PL L +     N +VE+P+ ++ K E++ +  + PI QD K GKLR+    +PY+    NYG  PQTWEDP+  +   + + A  GDNDP+D  EIG    ++G I +V+ L +LA+ID+GELDWK++ I ++DP
Sbjct:   33 QFSTIQQGSKYTLGFKKYLTLLNGEVGSFFHDVPLDLNEHEKTVNMIVEVPRWTTGKFEISKELRFNPIVQDTKNGKLRFVNNIFPYHGYIHNYGAIPQTWEDPTIEHKLGKCDVALKGDNDPLDCCEIGSDVLEMGSIKKVKVLGSLALIDDGELDWKVIVIDVNDP 200          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_HORVD (Soluble inorganic pyrophosphatase OS=Hordeum vulgare var. distichum GN=IPP PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.794e-11
Identity = 54/159 (33.96%), Postives = 76/159 (47.80%), Query Frame = 2
Query:  248 QITEEGQPETLDYRVFFVNNSGKKVSPWHDIPLQLGDG---VFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDP 715
            Q T    P+  +  +  ++  G    PWHD  L++G G   VFN VVEI K S  K E+  D+    IK D        YP+N    YG  P+T  +             DNDP+DV+ + +     G  LR + +  + MID+GE D KI+A+  DDP
Sbjct:   14 QPTSRPAPKLNERILSSLSRRGGGAHPWHD--LEIGPGAPAVFNVVVEITKGSKVKYEL--DKKTGLIKVDRVLYSSVVYPHN----YGFIPRTLCE-------------DNDPMDVLVLMQEPVIPGSFLRARAIGLMPMIDQGEKDDKIIAVCADDP 151          
BLAST of FC930035 vs. ExPASy Swiss-Prot
Match: IPYR_ORYSJ (Soluble inorganic pyrophosphatase OS=Oryza sativa subsp. japonica GN=IPP PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.816e-11
Identity = 49/133 (36.84%), Postives = 68/133 (51.13%), Query Frame = 2
Query:  326 PWHDIPLQLGDG---VFNFVVEIPKESSAKMEVATDELYTPIKQDIKKGKLRYYPYNINWNYGLFPQTWEDPSFANSEVEGAFGDNDPVDVVEIGERRRKIGEILRVQPLSALAMIDEGELDWKIVAISLDDP 715
            PWHD  L++G G   VFN VVEIP+ S  K E+  D+    IK D        YP+N    YG  P+T  +             D DP+DV+ + + +   G  LR + +  + MID+GE D KI+A+  DDP
Sbjct:   37 PWHD--LEIGPGAPAVFNCVVEIPRGSKVKYEL--DKATGLIKVDRVLYSSVVYPHN----YGFIPRTLCE-------------DGDPMDVLVLMQEQVVPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDP 148          
The following BLAST results are available for this feature:
BLAST of FC930035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
IPYR_SCHPO5.182e-3546.63Inorganic pyrophosphatase OS=Schizosaccharomyces p... [more]
IPYR_YARLI4.387e-3448.10Inorganic pyrophosphatase OS=Yarrowia lipolytica G... [more]
IPYR_PICPA1.667e-3347.20Inorganic pyrophosphatase OS=Pichia pastoris GN=IP... [more]
IPYR2_SCHPO2.844e-3347.77Putative inorganic pyrophosphatase C3A12.02 OS=Sch... [more]
IPYR_DICDI1.411e-3244.58Inorganic pyrophosphatase OS=Dictyostelium discoid... [more]
IPYR_PLAF71.195e-3147.06Probable inorganic pyrophosphatase OS=Plasmodium f... [more]
IPYR_ENCCU3.476e-3141.32Inorganic pyrophosphatase OS=Encephalitozoon cunic... [more]
IPYR2_YEAST3.977e-2738.69Inorganic pyrophosphatase, mitochondrial OS=Saccha... [more]
IPYR_HORVD1.794e-1133.96Soluble inorganic pyrophosphatase OS=Hordeum vulga... [more]
IPYR_ORYSJ6.816e-1136.84Soluble inorganic pyrophosphatase OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC34003B01EF PostHarvC1 Citrus clementina cDNA clone C34003B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930035 ID=FC930035; Name=FC930035; organism=Citrus clementina; type=EST; length=724bp
GAAAACACTTCCCAGTCAAATCTCCAAAACTCATTCCACTTTCTCACTGA
CTCCCACTCACAGTCGCCAGTCAGCAGCCATGGCAGCCGCAAAAGCGATA
AGCCAAACCACTTCTTGCTTGCTGTCCAAAACACCCTTTGCTCTGAAACA
CAAATCCCACATCACAAATCTTTGCTTTGGTACCAAAGGAGTTGCTTTTC
CGTCAAAGAGGCTGTTTTCATGTAGGGCTATTTATAATCCTCAGGTTCAA
ATCACAGAGGAGGGCCAGCCTGAAACTCTAGATTACAGAGTCTTTTTCGT
CAACAATTCTGGCAAAAAGGTTTCTCCCTGGCATGACATACCGCTGCAAT
TGGGTGACGGTGTTTTCAACTTTGTTGTTGAAATACCCAAAGAATCAAGT
GCAAAGATGGAGGTTGCTACTGATGAGCTATACACCCCTATTAAACAGGA
TATAAAGAAGGGGAAGCTTCGATACTACCCATACAACATAAATTGGAATT
ATGGATTGTTTCCACAAACATGGGAAGATCCATCTTTTGCAAACTCTGAA
GTTGAAGGGGCATTTGGGGATAATGATCCAGTTGATGTTGTTGAGATTGG
TGAAAGAAGGAGAAAGATTGGTGAAATTCTTAGGGTNCAGCCCTTGAGTG
CCTTAGCCATGATTGATGAAGGTGAACTTGACTGGAAAATAGTGGCAATT
TCATTGGATGATCCAAGGCTGCCC
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