FC930065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1B1_BOVIN (Aldehyde dehydrogenase X, mitochondrial (Fragment) OS=Bos taurus GN=ALDH1B1 PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.676e-35 Identity = 81/168 (48.21%), Postives = 107/168 (63.69%), Query Frame = 1 Query: 196 AAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 +AAA PI P D QL I+ ++ D+ S KTFPT+ P TG+VI HVAEG+ DV+ A AAR AF G PW A +R ++ ADL+ER +A+LE+ DNGKPF++S ++ +++RY+AGWADK G T P DG + T HEP+GV QIIPWNF Sbjct: 15 SAAALPSPIPNPDIPD-NQLFISNKWHDAVSKKTFPTVSPATGEVIGHVAEGDWADVDLAAKAARAAFRLGSPWRWMDALKRGWLLNHLADLVERDCVYLASLESLDNGKPFQESYVLDLDEVIKVYRYFAGWADKWHGKTIPMDGEHFCFTRHEPVGVCCQIIPWNF 181
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A1_MACFA (Retinal dehydrogenase 1 OS=Macaca fascicularis GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 149.443 bits (376), Expect = 1.676e-35 Identity = 74/170 (43.53%), Postives = 107/170 (62.94%), Query Frame = 1 Query: 193 SAAAAAEDPITPP-VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 S++ ++ P+ P +K+ YT++ IN ++ DS SGK FP +P T + + V EG+ DV++AV AAR+AF G PW A ER +++ + ADL+ER +A +E+ + GK + + ++ + RY AGWADKIQG T P DG + T HEPIGV GQIIPWNF Sbjct: 2 SSSGTSDLPVLPTDLKIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNF 171
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.189e-35 Identity = 72/156 (46.15%), Postives = 101/156 (64.74%), Query Frame = 1 Query: 232 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 +K YT++ IN ++ DS SGK FP +P T + + V EG+ EDVN+AV+AAR+AF G PW A ER +++ + ADL+ER +A +E+ + GK F + ++ + RY AGWADKIQG T P+DG + T HEP+GV GQI+PWNF Sbjct: 15 LKFQYTKIFINNEWHDSVSGKKFPVFNPATEEKLCEVEEGDKEDVNKAVAAARQAFQIGSPWRTMDASERGRLLYKLADLVERDRLILATMESMNGGKLFSNAYLMDLGGCLKTLRYCAGWADKIQGRTIPSDGNFFTYTRHEPVGVCGQILPWNF 170
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.859e-35 Identity = 72/156 (46.15%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 232 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 +K+ YT++ IN ++ DS SGK FP +P T + + V EG+ EDV++AV AAR+AF G PW A ER +++ + ADL+ER +A +E+ + GK + + ++ + RY AGWADKIQG T P DG + T HEPIGV GQIIPWNF Sbjct: 16 LKIQYTKIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQGRTIPIDGNFFTYTRHEPIGVCGQIIPWNF 171
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: ALDH1_MACPR (Aldehyde dehydrogenase, cytosolic 1 OS=Macroscelides proboscideus GN=ALDH1 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35 Identity = 74/155 (47.74%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 232 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWN 693 +K+ +T+L IN ++ DS SGKTFP +P T + I V E + EDV++AV AAR+AF G PW A ER ++I + ADL+ER +A LE+ + GK F + ++ ++ RY AGWADKIQG T P DG + T HEPIGV GQI PWN Sbjct: 16 IKIQHTKLFINNEWHDSVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKIFASAYLMDLDYCIKVLRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGQIFPWN 170
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.086e-34 Identity = 71/156 (45.51%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 232 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 +++ YT++ IN ++ +S SG+ FP +P TG+ I + E + D ++AV AAR AF G W R A ER ++ + ADL+ER +A +E+ ++GKPF Q+ ++ + RYYAGWADKI G+T P DG Y T HEPIGV GQIIPWNF Sbjct: 33 LEIKYTKIFINNEWQNSESGRIFPVYNPATGEQICDIQEADKVDTDKAVRAARLAFSLGSVWRRMDASERGHLLDKLADLVERDRAILATMESLNSGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNF 188
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A2_CHICK (Retinal dehydrogenase 2 OS=Gallus gallus GN=ALDH1A2 PE=2 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.086e-34 Identity = 70/156 (44.87%), Postives = 101/156 (64.74%), Query Frame = 1 Query: 232 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGP-WPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 +++ +T++ IN ++ +S SG+ FP +P TG+ I + E + D ++AV AAR AF G W R A ER +++ + ADL+ER +A +E+ ++GKPF Q+ ++ + RYYAGWADKI G+T P DG Y T HEPIGV GQIIPWNF Sbjct: 33 LEIKHTKIFINNEWQNSESGRVFPVYNPATGEQICEIQEADKVDTDKAVRAARLAFSLGSVWRRMDASERGQLLDKLADLVERDRAVLATMESLNSGKPFLQAFYVDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNF 188
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 75/170 (44.12%), Postives = 106/170 (62.35%), Query Frame = 1 Query: 187 VSSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWN 693 +SS A A +K+ +T++ IN ++ DS S K FP L+P T +VI HV EG+ DV++AV AAR+AF G PW A ER +++ + ADL+ER +A +E+ + GK F + +V ++ + +Y+AGWADKI G T P+DG T EPIGV GQIIPWN Sbjct: 1 MSSPAQPAVPAPLANLKIQHTKIFINNEWHDSVSSKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATMESMNAGKVFAHAYLLDVEISIKALQYFAGWADKIHGQTIPSDGNIFTYTRREPIGVCGQIIPWN 170
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 76/171 (44.44%), Postives = 106/171 (61.99%), Query Frame = 1 Query: 187 VSSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 +SS A A +K+ +T++ IN ++ DS SGK FP L+P T +VI HV EG+ DV++AV AAR+AF G PW A ER +++ + ADL+ER +A +E + GK F + +++ + + +Y AGWADKI G T P+DG T EPIGV GQIIPWNF Sbjct: 1 MSSPAQPAVPAPLANLKIQHTKIFINNEWHDSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIHGQTIPSDGDIFTFTRREPIGVCGQIIPWNF 171
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.420e-34 Identity = 72/156 (46.15%), Postives = 100/156 (64.10%), Query Frame = 1 Query: 232 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 +K+ YT++ IN ++ DS SGK FP L+P T + I + EG+ DV++AV AAR+AF G PW A ER +++ + ADL+ER +A +E+ + GK F + ++ + RY AGWADKIQG T P DG + T HEP+GV GQIIPWNF Sbjct: 11 LKIQYTKIFINNEWHDSVSGKKFPVLNPATEEQICLIEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLYKLADLIERDRLLLATMESLNAGKLFPNAYLMDLGGCIKTLRYCAGWADKIQGRTMPMDGDFFCYTRHEPVGVCGQIIPWNF 166 The following BLAST results are available for this feature:
BLAST of FC930065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 295
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930065 ID=FC930065; Name=FC930065; organism=Citrus clementina; type=EST; length=698bpback to top |