FC930065

Overview
NameFC930065
Unique NameFC930065
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB2_RHIME (Betaine aldehyde dehydrogenase 2 OS=Rhizobium meliloti GN=betB2 PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 41/146 (28.08%), Postives = 74/146 (50.68%), Query Frame = 1
Query:  259 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            I+G F++  +G    +++P  G++I  +    +  + +A+++A++A  E  W RK   ER +++ R AD++   N E++ LET D GKP  ++   +         Y+   A  + G  +   G   V T  EP+GV   I  WN+
Sbjct:   14 IDGTFIEDRTGPEILSVNPVDGEIIAKLHGATSCIIEKAIASAKRAQKE--WARKEPAERGRVLSRAADIMRARNRELSVLETRDTGKPISETLVADAASGADCLEYFGAIAATLSG-DSIQFGEDWVYTRREPLGVCLGIGAWNY 156          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BADH1_ARATH (Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12
Identity = 48/159 (30.19%), Postives = 75/159 (47.17%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG---PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-------YHVQTLHEPIGVAGQIIPWNF 696
            QL I+G++ +    K  P ++P T +VI  +     EDV+ AV+AAR+A        W +     R+K +   A  +     ++A LE  D GKP ++ A  ++      F +Y   AD  +GL A    P       +    L +P+GV G I PWN+
Sbjct:    9 QLFIDGEWREPILKKRIPIVNPATEEVIGDIPAATTEDVDVAVNAARRALSRNKGKDWAKAPGAVRAKYLRAIAAKVNERKTDLAKLEALDCGKPLDE-AVWDMDDVAGCFEFY---ADLAEGLDAKQKAPVSLPMESFKSYVLKQPLGVVGLITPWNY 163          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: IOLA_LACCA (Methylmalonate semialdehyde dehydrogenase [acylating] OS=Lactobacillus casei GN=iolA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12
Identity = 49/148 (33.11%), Postives = 77/148 (52.03%), Query Frame = 1
Query:  259 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--LTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            ING++VD+ +       +P TGDV+  V    +EDV  AV+AA++AF    W + +  +R+KI+ ++  LL  H +E+  + T +NGK  ++ A  EV        + AG    + G  L++ A           PIGV G I P+NF
Sbjct:   15 INGKWVDAKTETFENVYNPATGDVLARVPHSTSEDVADAVTAAKEAFK--IWQKVSIPKRAKILFKYQQLLVEHQEELGRIVTEENGKSLDE-AVAEVGRGIENVEFAAGVPTLMMGDSLSSVAT-DVEATNYRYPIGVVGGITPFNF 158          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_RHILW (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12
Identity = 44/147 (29.93%), Postives = 71/147 (48.30%), Query Frame = 1
Query:  259 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            I+G++V+   G    +L P TG+VI  +       V +A++AAR+A  E  W   +   R +I+ R AD++   N  ++ LET D GKP +++   +       F ++ G A   + G   P  G     T   P+GV   I  WN+
Sbjct:   11 IDGEYVEDTDGTVIESLYPATGEVIARLHAATPAIVEKAIAAARRAQPE--WAAMSPMARGRILKRAADIMRERNRALSELETLDTGKPIQETIVADPTSGADAFEFFGGVAPAGLNGSHIPL-GQDFAYTKRVPLGVCVGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_RHIL3 (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.441e-12
Identity = 44/147 (29.93%), Postives = 71/147 (48.30%), Query Frame = 1
Query:  259 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK-IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            I+G++V+   G    +L P TG+VI  +       V RA++AA++A  E  W   +   R +I+ R AD++   N  ++ LET D GKP +++   +       F ++ G A   + G   P  G     T   P+GV   I  WN+
Sbjct:   11 IDGEYVEDTDGTVIESLYPATGEVIARLHAATPAIVERAIAAAKRAQPE--WAAMSPMARGRILKRAADIMRERNRVLSELETLDTGKPIQETVVADPTSGADAFEFFGGIAPAGLNGSHIPL-GQDFAYTKRVPLGVCVGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL9A1_ORYLA (Aldehyde dehydrogenase family 9 member A1 OS=Oryzias latipes GN=aldh9A1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12
Identity = 40/132 (30.30%), Postives = 68/132 (51.52%), Query Frame = 1
Query:  301 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            P  +P TG V+  +    AE+V+ A+ +A  A+ +  W +K+  ER++++L  A ++    ++IA LE  +NGK   + A  ++ +  +   YYAG A  + G      G     T  EP+GV   I  WN+
Sbjct:   41 PVFEPATGRVLCQMVPCGAEEVDEAIMSAHAAYVQ--WSKKSGTERARVMLEAARIIRERREKIAKLEVINNGKSITE-ALVDIDVAWQCIEYYAGVAGTLAGQHFQLPGGAFAYTRREPLGVCVGIGAWNY 169          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL9A1_MOUSE (4-trimethylaminobutyraldehyde dehydrogenase OS=Mus musculus GN=Aldh9a1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12
Identity = 49/138 (35.51%), Postives = 70/138 (50.72%), Query Frame = 1
Query:  283 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            ASG T    +P TG VI   A    ++VN AV  A+ AF    W +K+  ER +++L  A +++   DEIA +ET +NGK   + A+ +V    +   YYAG A  + G      G     T  EP+GV   I  WN+
Sbjct:   25 ASG-TEKAFEPATGRVIATFACSGEKEVNLAVENAKAAFKL--WSKKSGLERCQVLLEAARIIKERKDEIATVETINNGKSIFE-ARLDVDTCWQCLEYYAGLAASMAGEHIQLPGGSFGYTRREPLGVCVGIGAWNY 158          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: IOLA1_GEOKA (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Geobacillus kaustophilus GN=iolA1 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 48/148 (32.43%), Postives = 77/148 (52.03%), Query Frame = 1
Query:  259 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQG--LTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            I GQ+V S+  +T    +P TG+V+  V     EDV++AV AA+KAF    W      +R++I+  F  LL +H++E+A L   +NGK +++ A  E+        + AG    + G  L+  A+     +    P+GV   I P+NF
Sbjct:   15 IGGQWVASSGTETLEVPNPATGEVLARVPISTKEDVDQAVQAAKKAF--ATWKDVPVPKRARIMFSFHHLLNQHHEELAELVVQENGKAYKE-AYGEIQRGIECVEFAAGAPTLLMGESLSNIAE-EIDSEMFRYPLGVVAGITPFNF 158          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: GABD_BACSU (Succinate-semialdehyde dehydrogenase [NADP+] OS=Bacillus subtilis GN=gabD PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 40/130 (30.77%), Postives = 68/130 (52.31%), Query Frame = 1
Query:  310 DPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGP-YHVQTLHEPIGVAGQIIPWNF 696
            +P TG+ I  + +  A +V  A+  + +AF    W + +A ER+ ++ ++ +L+  H +E+A L T +NGKP+ Q A  EV        ++A  A ++ G T PA      +    +P+G    I PWNF
Sbjct:    9 NPATGEEIKTIPQQSATEVEEAIERSHQAFKT--WSKTSANERTSLLKKWYELIVEHKEELADLITKENGKPY-QEAVGEVLYGAGYIEWFAEEAKRVYGRTVPAPTTGKRIVVTRQPVGPVAAITPWNF 135          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_OCHA4 (Betaine aldehyde dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=betB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 41/146 (28.08%), Postives = 66/146 (45.21%), Query Frame = 1
Query:  259 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            I G FV+  +GK  P + P TG+ I  +     + +  A +AA KA  +G W      ER +I+ R AD+L   N +++ LET D GK  +++   +         ++ G      G      G +   T  E +G+   I  WN+
Sbjct:   11 IGGAFVEDKTGKPSPVIYPATGEEIARLYSATPDVIEAAYAAALKA--QGEWAALKPVERGRILRRTADILREKNKKLSKLETLDTGKALQETLVADAASAADALEFFGGIISGFNGEFVELGGSF-AYTRREALGICVGIGAWNY 153          
The following BLAST results are available for this feature:
BLAST of FC930065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 295
Match NameE-valueIdentityDescription
BETB2_RHIME3.401e-1228.08Betaine aldehyde dehydrogenase 2 OS=Rhizobium meli... [more]
BADH1_ARATH3.401e-1230.19Betaine aldehyde dehydrogenase 1, chloroplastic OS... [more]
IOLA_LACCA4.441e-1233.11Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_RHILW4.441e-1229.93Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]
BETB_RHIL34.441e-1229.93Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]
AL9A1_ORYLA5.801e-1230.30Aldehyde dehydrogenase family 9 member A1 OS=Oryzi... [more]
AL9A1_MOUSE5.801e-1235.514-trimethylaminobutyraldehyde dehydrogenase OS=Mus... [more]
IOLA1_GEOKA7.576e-1232.43Methylmalonate semialdehyde dehydrogenase [acylati... [more]
GABD_BACSU7.576e-1230.77Succinate-semialdehyde dehydrogenase [NADP+] OS=Ba... [more]
BETB_OCHA49.894e-1228.08Betaine aldehyde dehydrogenase OS=Ochrobactrum ant... [more]

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Properties
Property NameValue
Genbank descriptionC34003D08EF PostHarvC1 Citrus clementina cDNA clone C34003D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930065 ID=FC930065; Name=FC930065; organism=Citrus clementina; type=EST; length=698bp
CACAAGAGAGGAGGAGAGGAAAAAAAAAAAAAGATAAAAATTAAAGTTGT
GATGGCTGCAAGAAGGATTCCGCTTTTGCTTTCACGTTCATTCACGTCTT
CTTCACCTACTCTGTTTTCAAGAGGGAGGGATTCTAGTTTGTGCAGAGCT
GCTGCTGCTGCTGCCGCCTCCTGCGGATACAGCACGGTTTCTTCTGCTGC
TGCTGCTGCTGAAGATCCAATTACTCCGCCTGTTAAAGTTGATTATACTC
AGCTTCTAATTAATGGACAATTTGTTGATTCTGCATCAGGCAAAACGTTT
CCCACATTAGACCCCAGGACTGGTGATGTGATTACTCATGTAGCTGAAGG
TGAGGCTGAAGACGTCAACCGAGCAGTTTCTGCTGCTCGCAAGGCATTTG
ATGAAGGACCGTGGCCTAGGAAGACTGCTTATGAAAGGTCAAAAATAATT
TTGCGCTTCGCTGATTTGCTGGAAAGGCATAATGATGAAATTGCAGCCCT
TGAGACTTGGGATAACGGGAAGCCATTCGAGCAGTCTGCCCAGACTGAAG
TACCAATGACCACGCGTTTATTCCGGTACTACGCTGGTTGGGCAGATAAG
ATTCAGGGTCTCACTGCTCCAGCTGATGGACCGTACCATGTGCAAACCTT
GCACGAACCAATTGGTGTAGCAGGTCAAATTATCCCATGGAACTTTCC
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