FC930065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5) HSP 1 Score: 144.821 bits (364), Expect = 4.128e-34 Identity = 75/171 (43.86%), Postives = 105/171 (61.40%), Query Frame = 1 Query: 187 VSSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 +SS A A +K+ +T++ IN ++ +S SGK FP L+P T +VI HV EG+ DV++AV AAR+AF G PW A ER +++ + ADL+ER +A +E + GK F + +++ + +Y AGWADKI G T P+DG T EPIGV GQIIPWNF Sbjct: 1 MSSPAQPAVPAPLADLKIQHTKIFINNEWHNSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQTIPSDGDIFTYTRREPIGVCGQIIPWNF 171
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A1_CHICK (Retinal dehydrogenase 1 OS=Gallus gallus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.042e-34 Identity = 71/156 (45.51%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 232 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 +K+ YT++ IN ++ DS SGK F +P + I VAEG+ D+++AV AARKAF+ G PW A ER +++ + ADL+ER +A +E D GK F + ++ + RY AGWADKI G T P DG + T HEP+GV GQIIPWNF Sbjct: 24 LKIKYTKIFINNEWHDSVSGKKFEVFNPANEEKICEVAEGDKADIDKAVKAARKAFELGSPWRTMDASERGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADKIHGRTVPMDGNFFTFTRHEPVGVCGQIIPWNF 179
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.049e-33 Identity = 72/155 (46.45%), Postives = 97/155 (62.58%), Query Frame = 1 Query: 232 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWN 693 +K+ +T+L IN ++ +S SGKTFP +P T + I V E + EDV++AV AAR+AF G PW A ER ++I + ADL+ER +A LE+ + GK F + ++ + RY AGWADKIQG T P DG + T HEPIGV G I PWN Sbjct: 16 IKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWN 170
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.564e-33 Identity = 72/170 (42.35%), Postives = 105/170 (61.76%), Query Frame = 1 Query: 187 VSSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWN 693 +SS A A +K+ +T++ IN ++ +S +GK FP ++P T +VI HV EG+ DV++AV AAR+AF G PW A ER ++ + ADL+ER +A +E+ + GK F + + ++ + +Y+AGWADKI G T P+DG T EPIGV GQIIPWN Sbjct: 1 MSSPAQPAVPAPLANLKIQHTKIFINNEWHNSLNGKKFPVINPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGCLLNKLADLMERDRVLLATMESMNAGKIFTHAYLLDTEVSIKALKYFAGWADKIHGQTIPSDGDVFTYTRREPIGVCGQIIPWN 170
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.564e-33 Identity = 73/156 (46.79%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 232 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 ++V +T++ IN ++ +S SGK F T +P T + I V EG+ DV++AV AA+ AF G PW R A R +++ + ADL+ER +AALET D GKPF + ++ R RY+AGWADKIQG T P D T HEPIGV G I PWNF Sbjct: 27 LEVKFTKIFINNEWHESKSGKKFATCNPSTREQICEVEEGDKPDVDKAVEAAQVAFQRGSPWRRLDALSRGRLLHQLADLVERDRATLAALETMDTGKPFLHAFFIDLEGCIRTLRYFAGWADKIQGKTIPTDDNVVCFTRHEPIGVCGAITPWNF 182
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: FTHFD_XENTR (10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis GN=aldh1l1 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.785e-33 Identity = 67/159 (42.14%), Postives = 103/159 (64.78%), Query Frame = 1 Query: 232 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL----HEPIGVAGQIIPWNF 696 VK+ + QL INGQF+D+ GKT+ T++P G I V+ + D++RAV+AA++AF+ G W + +R +I+ R AD++E H +E+A +E+ D+G + + +T V M+ + FRY+AGW DKIQG T P + + L EPIGV G +IPWN+ Sbjct: 418 VKIPH-QLFINGQFIDAEGGKTYDTVNPTDGTAICKVSLAQVSDIDRAVAAAKEAFENGEWGKMNPRDRGRILYRLADIMEEHQEELATIESIDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTFTRREPIGVCGIVIPWNY 575
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 7.785e-33 Identity = 74/170 (43.53%), Postives = 103/170 (60.59%), Query Frame = 1 Query: 190 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 SSA P+T ++ YT++ IN ++ S SGK FP +P T + + V EG+ EDV++AV AAR+AF G PW A ER +++ + ADL+ER + +A +E + GK F + ++ + RY AGWADKIQG T P DG + T EP+GV GQIIPWNF Sbjct: 3 SSAMPDVPAPLTN-LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNF 171
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.017e-32 Identity = 74/170 (43.53%), Postives = 102/170 (60.00%), Query Frame = 1 Query: 190 SSAAAAAEDPITPPVKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696 SSA P+T ++ YT++ IN ++ S SGK FP +P T + + V EG+ EDV++AV AAR+AF G PW A ER +++ + ADL+ER +A +E + GK F + ++ + RY AGWADKIQG T P DG + T EP+GV GQIIPWNF Sbjct: 3 SSAMPDVPAPLTN-LQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNF 171
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: FTHFD_XENLA (10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis GN=aldh1l1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 66/159 (41.51%), Postives = 103/159 (64.78%), Query Frame = 1 Query: 232 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL----HEPIGVAGQIIPWNF 696 VK+ + QL INGQF+D+ GK++ T++P G I V+ + D++RAV+AA++AF+ G W + +R +++ R ADL+E H +E+A +E+ D+G + + +T V M+ + FRY+AGW DKIQG T P + + L EPIGV G +IPWN+ Sbjct: 418 VKIPH-QLFINGQFMDAEGGKSYDTINPTDGTAICKVSLAQISDIDRAVAAAKEAFENGEWGKMNPRDRGRLLYRLADLMEEHQEELATIESIDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGRTIPINQARPNRNLTFTRREPIGVCGIVIPWNY 575
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: ALDH_ALTAL (Aldehyde dehydrogenase OS=Alternaria alternata GN=ALTA10 PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32 Identity = 75/153 (49.02%), Postives = 95/153 (62.09%), Query Frame = 1 Query: 247 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGL---TAPADGPYHVQTLHEPIGVAGQIIPWNF 696 T L IN +FV + GKTF ++P T +VI V E +DV+ AV+AARKAF+ GPW ++T R K++ + ADL E++ D IAA+E DNGK F + +VP RYY GWADKI+G TAP Y EPIGV GQIIPWNF Sbjct: 18 TGLFINNEFVKAVDGKTFDVINPSTEEVICSVQEATEKDVDIAVAAARKAFN-GPWRKETPENRGKLLNKLADLFEKNADLIAAVEALDNGKAFSMAKNVDVPAAAGCLRYYGGWADKIEGKVVDTAPDSFNY---IRKEPIGVCGQIIPWNF 166 The following BLAST results are available for this feature:
BLAST of FC930065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 295
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930065 ID=FC930065; Name=FC930065; organism=Citrus clementina; type=EST; length=698bpback to top |