FC930065

Overview
NameFC930065
Unique NameFC930065
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_BURM7 (Betaine aldehyde dehydrogenase OS=Burkholderia mallei (strain NCTC 10247) GN=betB PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24
Identity = 60/149 (40.27%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            +L I G   D+ SGKTF T DP TG+++  V +  A+DV+RAV++AR+   E  W   TA +RS+I+ R  +LL   ND +A LE  D GKP  ++   ++     +  YYAG A  I+GL  P      V T  EP+GV   I  WN+
Sbjct:    8 RLYIAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: ALDH3_YEAST (Aldehyde dehydrogenase [NAD(P)+] 2 OS=Saccharomyces cerevisiae GN=ALD3 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24
Identity = 64/161 (39.75%), Postives = 87/161 (54.04%), Query Frame = 1
Query:  226 PPVKVDYTQ---LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI-QGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            P +K+   Q   L IN +F  S+ GKT  T++P TG+ IT       +DV++AV AAR AFD   W + ++ +R   +     L+E   D +AALET D GKPF  +A+ ++     L RYYAG  DK   G T P        TL  P GV  QI+PWN+
Sbjct:   11 PQLKISLKQPLGLFINNEFCPSSDGKTIETVNPATGEPITSFQAANEKDVDKAVKAARAAFDN-VWSKTSSEQRGIYLSNLLKLIEEEQDTLAALETLDAGKPFHSNAKQDLAQIIELTRYYAGAVDKFNMGETIPLTFNKFAYTLKVPFGVVAQIVPWNY 170          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: ALDH2_YEAST (Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyces cerevisiae GN=ALD2 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.019e-24
Identity = 63/161 (39.13%), Postives = 90/161 (55.90%), Query Frame = 1
Query:  226 PPVKVDYTQ---LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI-QGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            P +K+   Q   L IN +F  S+ GKT  T++P TG+ IT       +DV++AV AAR AFD   W + ++ +R   +     L+E   D +AALET D GKP+  +A+ ++    +L RY+AG ADK  +G T P        TL  P GV  QI+PWN+
Sbjct:   11 PQLKISLKQPLGLFINNEFCPSSDGKTIETVNPATGEPITSFQAANEKDVDKAVKAARAAFDN-VWSKTSSEQRGIYLSNLLKLIEEEQDTLAALETLDAGKPYHSNAKGDLAQILQLTRYFAGSADKFDKGATIPLTFNKFAYTLKVPFGVVAQIVPWNY 170          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ACIAD (Betaine aldehyde dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betB PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.331e-24
Identity = 58/149 (38.93%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            +L I+GQ+ D+ SGKTF +++P TG+VI  + +    D+  AV +A +   +  W  KTA ERS+I+ R  D+L   NDE+A LET D GK F +++  ++     +  YYAG A  IQG   P        T  EP+GV   I  WN+
Sbjct:    8 RLYIHGQYTDATSGKTFDSINPATGEVIATIQQASQTDIEAAVKSAAEG--QKVWAAKTAVERSRILRRAVDILRERNDELAQLETLDTGKAFSETSTVDIVTGADVLEYYAGLATAIQGEQVPLRESSFFYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            +L ING + DS SG TF  ++P  G+ I  +    A+DV++AV+AA++   +  W   TA ERS+I+ R  D+L   NDE+AA+ET D GKP  ++   ++     +  YYAG    ++G   P  G   V T  EP+GV   I  WN+
Sbjct:    8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_YERPS (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            +L ING + DS SG TF  ++P  G+ I  +    A+DV++AV+AA++   +  W   TA ERS+I+ R  D+L   NDE+AA+ET D GKP  ++   ++     +  YYAG    ++G   P  G   V T  EP+GV   I  WN+
Sbjct:    8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_YERPP (Betaine aldehyde dehydrogenase OS=Yersinia pestis (strain Pestoides F) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            +L ING + DS SG TF  ++P  G+ I  +    A+DV++AV+AA++   +  W   TA ERS+I+ R  D+L   NDE+AA+ET D GKP  ++   ++     +  YYAG    ++G   P  G   V T  EP+GV   I  WN+
Sbjct:    8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_YERPN (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            +L ING + DS SG TF  ++P  G+ I  +    A+DV++AV+AA++   +  W   TA ERS+I+ R  D+L   NDE+AA+ET D GKP  ++   ++     +  YYAG    ++G   P  G   V T  EP+GV   I  WN+
Sbjct:    8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_YERPE (Betaine aldehyde dehydrogenase OS=Yersinia pestis GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            +L ING + DS SG TF  ++P  G+ I  +    A+DV++AV+AA++   +  W   TA ERS+I+ R  D+L   NDE+AA+ET D GKP  ++   ++     +  YYAG    ++G   P  G   V T  EP+GV   I  WN+
Sbjct:    8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_YERPB (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            +L ING + DS SG TF  ++P  G+ I  +    A+DV++AV+AA++   +  W   TA ERS+I+ R  D+L   NDE+AA+ET D GKP  ++   ++     +  YYAG    ++G   P  G   V T  EP+GV   I  WN+
Sbjct:    8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAFVYTRREPLGVVAGIGAWNY 154          
The following BLAST results are available for this feature:
BLAST of FC930065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 295
Match NameE-valueIdentityDescription
BETB_BURM71.019e-2440.27Betaine aldehyde dehydrogenase OS=Burkholderia mal... [more]
ALDH3_YEAST1.019e-2439.75Aldehyde dehydrogenase [NAD(P)+] 2 OS=Saccharomyce... [more]
ALDH2_YEAST1.019e-2439.13Aldehyde dehydrogenase [NAD(P)+] 1 OS=Saccharomyce... [more]
BETB_ACIAD1.331e-2438.93Betaine aldehyde dehydrogenase OS=Acinetobacter sp... [more]
BETB_YERPY1.738e-2438.26Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPS1.738e-2438.26Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPP1.738e-2438.26Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPN1.738e-2438.26Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPE1.738e-2438.26Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
BETB_YERPB1.738e-2438.26Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]

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Properties
Property NameValue
Genbank descriptionC34003D08EF PostHarvC1 Citrus clementina cDNA clone C34003D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930065 ID=FC930065; Name=FC930065; organism=Citrus clementina; type=EST; length=698bp
CACAAGAGAGGAGGAGAGGAAAAAAAAAAAAAGATAAAAATTAAAGTTGT
GATGGCTGCAAGAAGGATTCCGCTTTTGCTTTCACGTTCATTCACGTCTT
CTTCACCTACTCTGTTTTCAAGAGGGAGGGATTCTAGTTTGTGCAGAGCT
GCTGCTGCTGCTGCCGCCTCCTGCGGATACAGCACGGTTTCTTCTGCTGC
TGCTGCTGCTGAAGATCCAATTACTCCGCCTGTTAAAGTTGATTATACTC
AGCTTCTAATTAATGGACAATTTGTTGATTCTGCATCAGGCAAAACGTTT
CCCACATTAGACCCCAGGACTGGTGATGTGATTACTCATGTAGCTGAAGG
TGAGGCTGAAGACGTCAACCGAGCAGTTTCTGCTGCTCGCAAGGCATTTG
ATGAAGGACCGTGGCCTAGGAAGACTGCTTATGAAAGGTCAAAAATAATT
TTGCGCTTCGCTGATTTGCTGGAAAGGCATAATGATGAAATTGCAGCCCT
TGAGACTTGGGATAACGGGAAGCCATTCGAGCAGTCTGCCCAGACTGAAG
TACCAATGACCACGCGTTTATTCCGGTACTACGCTGGTTGGGCAGATAAG
ATTCAGGGTCTCACTGCTCCAGCTGATGGACCGTACCATGTGCAAACCTT
GCACGAACCAATTGGTGTAGCAGGTCAAATTATCCCATGGAACTTTCC
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