FC930065

Overview
NameFC930065
Unique NameFC930065
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_YERPA (Betaine aldehyde dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24
Identity = 57/149 (38.26%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            +L ING + DS SG TF  ++P  G+ I  +    A+DV++AV+AA++   +  W   TA ERS+I+ R  D+L   NDE+AA+ET D GKP  ++   ++     +  YYAG    ++G   P  G   V T  EP+GV   I  WN+
Sbjct:    8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGSAFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: ALDH_DEIRA (Aldehyde dehydrogenase OS=Deinococcus radiodurans GN=aldA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.738e-24
Identity = 59/146 (40.41%), Postives = 80/146 (54.79%), Query Frame = 1
Query:  259 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            I GQ+V    G+ F    P  G V T  A   AEDV  A+ AA +A     W R +  ERS I+L+ AD +E++ + +A  ETWDNGKP  ++   ++P+    FRY+AG     +G  +  D        HEP+GV GQIIPWNF
Sbjct:   33 IGGQWVPPVKGQYFDNASPVDGKVFTQAARSTAEDVELALDAAHRAAPA--WGRTSVTERSNILLKIADRMEQNLEMLAVAETWDNGKPVRETLAADLPLAIDHFRYFAGCIRAQEGGLSQIDDSTVAYHFHEPLGVVGQIIPWNF 176          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_BURP8 (Betaine aldehyde dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=betB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24
Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            +L I G +VD+ SG TF T DP TG+++  V +    D+ RAV +AR+   +  W   TA +RS+I+ R  DLL   NDE+A LE  D GKP  ++   ++     +  YYAG A  I+G   P      V T  EP+GV   I  WN+
Sbjct:    8 RLYIGGDYVDATSGVTFDTFDPATGELLATVQQASEADIERAVQSAREG--QRAWAAMTAMQRSRILRRAVDLLRERNDELAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGQQIPLRAESFVYTRREPLGVTAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_BURP6 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 668) GN=betB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.873e-24
Identity = 59/149 (39.60%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            +L I G   D+ SGKTF T DP TG+++  V +  A+DV+RAV++AR+   E  W   TA +RS+I+ R  +LL   N+ +A LE  D GKP  ++   ++     +  YYAG A  I+GL  P      V T  EP+GV   I  WN+
Sbjct:    8 RLYIAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNNALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVPLRPESFVYTRREPLGVCAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.058e-24
Identity = 61/149 (40.94%), Postives = 82/149 (55.03%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+GQ VD+ SGKTF T++P TGDVI  V      DV RAV +A +   +  W   TA ERS+I+ R  ++L   NDE+A LET D GK   ++   ++     +  YYAG A  I+G+  P        T  EP+GV   I  WN+
Sbjct:    8 QLYIHGQRVDATSGKTFRTVNPATGDVIAEVQVASQADVERAVQSAAEG--QKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLPLRESSFFYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_ERWCT (Betaine aldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=betB PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.606e-24
Identity = 59/149 (39.60%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL ING +VDS    TF  ++P  GD+I  +    A DV+RAVSAA     +  W   TA ERS+I+ R  D+L   NDE+A LET D GKP  ++   ++     +  YYAG    ++G   P      V T  EP+GV   I  WN+
Sbjct:    8 QLYINGAYVDSTGNDTFDAVNPANGDIIACIQSATAADVDRAVSAATAG--QKVWAAMTAMERSRILRRAVDILRERNDELALLETHDTGKPLSETRTVDIVTGADVLEYYAGLIPMLEGQQIPLRDTSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_PSEU5 (Betaine aldehyde dehydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=betB PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.628e-24
Identity = 58/149 (38.93%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+G +VD++S +TF +++P  G+V+  VAE  A D+ RAV +A +   +  W   T  ER++I+ R  DLL   NDE+A LET D GKP  ++   ++     +  YYAG A  I+G   P      V T  EP+GV   I  WN+
Sbjct:    8 QLYIHGAYVDASSNQTFESINPANGEVLAEVAEAGAADLERAVESAEQG--QRIWAALTGIERARIMRRAVDLLRERNDELALLETLDTGKPLSETRSVDIITGADVLEYYAGLAPAIEGEQIPLRDSSFVYTRREPLGVVAGIGAWNY 154          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: ALDH_VIBCH (Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.628e-24
Identity = 58/146 (39.73%), Postives = 81/146 (55.48%), Query Frame = 1
Query:  259 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            I GQ++   SG+ F    P  G V   VA   ++DV  A+ AA  A +   W   +A ERS I+LR AD +E + + +A +E+WDNGKP  ++   ++P+T   FRY+A      +G  +  D       L EPIGV GQIIPWNF
Sbjct:   23 IGGQWMKPHSGEYFSNTSPVNGLVFCRVARSSSQDVELALDAAHNALES--WSTTSAVERSNILLRIADRIESNLETLAIVESWDNGKPIRETLAADLPLTIDHFRYFAACIRSQEGAASELDSRTLTYHLPEPIGVVGQIIPWNF 166          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: ALDH_VIBC3 (Aldehyde dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=aldA PE=3 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.628e-24
Identity = 58/146 (39.73%), Postives = 81/146 (55.48%), Query Frame = 1
Query:  259 INGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            I GQ++   SG+ F    P  G V   VA   ++DV  A+ AA  A +   W   +A ERS I+LR AD +E + + +A +E+WDNGKP  ++   ++P+T   FRY+A      +G  +  D       L EPIGV GQIIPWNF
Sbjct:   23 IGGQWMKPHSGEYFSNTSPVNGLVFCRVARSSSQDVELALDAAHNALES--WSTTSAVERSNILLRIADRIESNLETLAIVESWDNGKPIRETLAADLPLTIDHFRYFAACIRSQEGAASELDSRTLTYHLPEPIGVVGQIIPWNF 166          
BLAST of FC930065 vs. ExPASy Swiss-Prot
Match: BETB_STRMK (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=betB PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.127e-23
Identity = 60/149 (40.27%), Postives = 82/149 (55.03%), Query Frame = 1
Query:  250 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRKTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNF 696
            QL I+GQ VD+ SGKTF T++P TG+VI  V      DV RAV +A +   +  W   TA ERS+I+ R  ++L   NDE+A LET D GK   ++   ++     +  YYAG A  I+G+  P        T  EP+GV   I  WN+
Sbjct:    8 QLYIHGQRVDATSGKTFKTVNPATGEVIAEVQVASQADVERAVQSASEG--QKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLPLRESSFFYTRREPLGVVAGIGAWNY 154          
The following BLAST results are available for this feature:
BLAST of FC930065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 295
Match NameE-valueIdentityDescription
BETB_YERPA1.738e-2438.26Betaine aldehyde dehydrogenase OS=Yersinia pestis ... [more]
ALDH_DEIRA1.738e-2440.41Aldehyde dehydrogenase OS=Deinococcus radiodurans ... [more]
BETB_BURP83.873e-2438.93Betaine aldehyde dehydrogenase OS=Burkholderia phy... [more]
BETB_BURP63.873e-2439.60Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_STRM55.058e-2440.94Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
BETB_ERWCT6.606e-2439.60Betaine aldehyde dehydrogenase OS=Erwinia carotovo... [more]
BETB_PSEU58.628e-2438.93Betaine aldehyde dehydrogenase OS=Pseudomonas stut... [more]
ALDH_VIBCH8.628e-2439.73Aldehyde dehydrogenase OS=Vibrio cholerae GN=aldA ... [more]
ALDH_VIBC38.628e-2439.73Aldehyde dehydrogenase OS=Vibrio cholerae serotype... [more]
BETB_STRMK1.127e-2340.27Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]

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Properties
Property NameValue
Genbank descriptionC34003D08EF PostHarvC1 Citrus clementina cDNA clone C34003D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930065 ID=FC930065; Name=FC930065; organism=Citrus clementina; type=EST; length=698bp
CACAAGAGAGGAGGAGAGGAAAAAAAAAAAAAGATAAAAATTAAAGTTGT
GATGGCTGCAAGAAGGATTCCGCTTTTGCTTTCACGTTCATTCACGTCTT
CTTCACCTACTCTGTTTTCAAGAGGGAGGGATTCTAGTTTGTGCAGAGCT
GCTGCTGCTGCTGCCGCCTCCTGCGGATACAGCACGGTTTCTTCTGCTGC
TGCTGCTGCTGAAGATCCAATTACTCCGCCTGTTAAAGTTGATTATACTC
AGCTTCTAATTAATGGACAATTTGTTGATTCTGCATCAGGCAAAACGTTT
CCCACATTAGACCCCAGGACTGGTGATGTGATTACTCATGTAGCTGAAGG
TGAGGCTGAAGACGTCAACCGAGCAGTTTCTGCTGCTCGCAAGGCATTTG
ATGAAGGACCGTGGCCTAGGAAGACTGCTTATGAAAGGTCAAAAATAATT
TTGCGCTTCGCTGATTTGCTGGAAAGGCATAATGATGAAATTGCAGCCCT
TGAGACTTGGGATAACGGGAAGCCATTCGAGCAGTCTGCCCAGACTGAAG
TACCAATGACCACGCGTTTATTCCGGTACTACGCTGGTTGGGCAGATAAG
ATTCAGGGTCTCACTGCTCCAGCTGATGGACCGTACCATGTGCAAACCTT
GCACGAACCAATTGGTGTAGCAGGTCAAATTATCCCATGGAACTTTCC
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