FC930068

Overview
NameFC930068
Unique NameFC930068
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 42/127 (33.07%), Postives = 68/127 (53.54%), Query Frame = 2
Query:  122 PSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIK 496
            P G W  PLIG+L  L   +P    L  LA K+GP+  LRLG+   +++S     ++     D   A+R  ++    + Y +   + APYG  WR +RK+  +ELL++H++  L  VR SE  + ++
Sbjct:   28 PPGPWRLPLIGNLLHLATSQPHVA-LRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIILYGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVR 153          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11
Identity = 59/237 (24.89%), Postives = 104/237 (43.88%), Query Frame = 2
Query:   29 IFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            +F    +++  F      K+  K      P P G  P+ G++  L G EP  K +  L  KYGP+  L+LG    ++V   +  ++ F  +D   A R      +   Y     A+APYG +WR  R+I T E+    ++   + VR   VD  +K +    + +A   + + +++ +   +FN+   LI  K  +    + +  EA     A+K      G+  + D  P+L+  D
Sbjct:    8 VFFSAIIILPAFILFFSQKNTTKSSYKFPPGPPGL-PIFGNMFEL-GTEPYKK-MAVLRQKYGPVLWLKLGSTYTMVVQTAQASEELFKNHDISFANRVIPDVNQAHSYYQGSLAIAPYGPFWRFQRRICTIEMFVHKKISETEPVRRKCVDNMLKWIEKE-ANSAEKGSGIEVTRFVFLASFNMLGNLILSKDLA----DLESEEASEFFIAMKRINEWSGIANVSDIFPFLKKFD 236          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: THAD_ARATH (Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=CYP705A5 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 61/227 (26.87%), Postives = 98/227 (43.17%), Query Frame = 2
Query:   29 IFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLG 709
            IF LL L     +     K+ + R     P    + P+IGHL L+    PI +    ++ KYGP+  LR    PI++VS      + F   D  +++R      + +   ++ F   PYG Y + ++K    +LL    L+  +++R  E++ F K L     + A     V I     +LT N   K+I G+  S     E+  EA  +   + ES  L     LG
Sbjct:   14 IFLLLCLFSRLSYDLFFRKTKDSRAGCALPPSPPSLPIIGHLHLILFV-PIHQSFKNISSKYGPLLHLRFFNFPIVLVSSASTAYEIFKAQDVNVSSRPPPPIEESLILGSSSFINTPYGDYSKFMKKFMVQKLLGPQALQRSRNIRADELERFYKTLL----DKAMKKQTVEIRNEAMKLTNNTICKMIMGRSCS-----EENGEAETVRGLVTESIFLTKKHFLG 230          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.864e-11
Identity = 53/196 (27.04%), Postives = 89/196 (45.41%), Query Frame = 2
Query:   41 LSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 628
            L LL ++  + I+ K++    K   P P+G  PLIG+L  L     +   L  L+ ++GP+  +R G  P+ + S  E  K+   T+D     R K+VA     +         YG+ WR+++K    EL S  + +  +++R  E D  +K +    S  A     V + K +   T +I  +   G+ F   DY
Sbjct:    5 LGLLFLFPLFFILFKNLLPPRKKLPPGPTGL-PLIGNLHQLG--RLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFTQYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKI----SNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDY 193          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.180e-11
Identity = 46/150 (30.67%), Postives = 83/150 (55.33%), Query Frame = 2
Query:  137 PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQ-YWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNI 583
            P+IG++ L+ G+ P  +    L+  YGP+ SL+LG    ++++  E  ++   T+D+IL+ R+   A + + + +A     P     WR +R+++ T+LLS  R+E  K +R ++V    K+L S  SE++     V IS++    T NI
Sbjct:   46 PIIGNIHLV-GKHPH-RSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSINHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKV----KELVSFISESSDREESVDISRVAFITTLNI 189          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.180e-11
Identity = 58/231 (25.11%), Postives = 108/231 (46.75%), Query Frame = 2
Query:   44 SLLIVYFFWRIIAKSINKR----EKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKES-THLFGVFVLGDAIP 721
            S+L+ +FF   +  ++ K+    +    P P+G  P+IG+L  L     +      L+ ++GP+  LR G  P++++S  E  K    + D    +R K+VA      +    A A YG+ WR+++K+   EL +  + +  +++R  E D  +K L    S+++     V + K     T  I  ++  G+ F   D+ +      R+   ++ES T++F  F   D  P
Sbjct:    4 SILLCFFFLFPLLLTLFKKLLPSKWKLPPGPTGL-PIIGNLHQLG--RLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSRPKLVANGLFTRNFKDIAFAQYGEDWREMKKLVGLELFNPKKHKFFRYIREEEGDLLVKKL----SKSSQTQTLVDLRKAFFSFTAGIIFRVSFGQNFRECDFIDMD----RLEELVQESETNVFS-FAFTDFFP 222          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 57/223 (25.56%), Postives = 100/223 (44.84%), Query Frame = 2
Query:   80 AKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGP--IYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKE-STHLFGVFVLGDAIPWLESID 739
            A S   ++    P P G  P+IGHL L+     +      L  KYG   +  +++G  P ++VS  +  +    T+D +LA+R +      + Y++   A APYG YWR  RK+  T LLS+  +   +  R  EV   +  +    +  A     + +++L+     +   + + G     + + +QG    ++ R + E S  L G F + D  P L  +D
Sbjct:   45 ATSPKWKQHRLPPTPPGKLPIIGHLHLIGSHPHVS--FRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEVRLVVARIRD--AAEASPGTALDMTELLGGYASDFVCRAVLG-----ESHRKQGRN--KLFRELTETSAALLGGFNVEDYFPKLADVD 256          
The following BLAST results are available for this feature:
BLAST of FC930068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C99A1_SORBI1.427e-1133.07Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C76A2_SOLME1.427e-1124.89Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
THAD_ARATH1.864e-1126.87Cytochrome P450 705A5 OS=Arabidopsis thaliana GN=C... [more]
C71BU_ARATH1.864e-1127.04Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C76C1_ARATH3.180e-1130.67Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C71B8_ARATH3.180e-1125.11Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C71C1_MAIZE9.252e-1125.56Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionC34003D11EF PostHarvC1 Citrus clementina cDNA clone C34003D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930068 ID=FC930068; Name=FC930068; organism=Citrus clementina; type=EST; length=740bp
GATGGATTCTACTTCTTTCACCCCAGCAATTTTTGAGCTCTTATCTCTGC
TAATTGTCTATTTTTTTTGGAGAATCATAGCAAAATCTATAAACAAAAGA
GAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGGCCA
TTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAGCAT
TGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCATCCC
ATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGATTGCTTCACTACCAA
TGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGCAGGCAAGTATATGG
GTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCAGTACTGGCGT
GATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCTTGA
ATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACACTTTCATCAAAGATT
TGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTGATC
AGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGCCTGAAACTGATAGC
TGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACAAGGCAGCGAGGCTT
GGCGTATCAATAGAGCAATAAAAGAAAGCACGCACCTATTCGGGGTTTTC
GTCTTGGGAGATGCCATACCATGGCTTGAATCGATTGACT
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