FC930068

Overview
NameFC930068
Unique NameFC930068
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.878e-17
Identity = 55/165 (33.33%), Postives = 89/165 (53.94%), Query Frame = 2
Query:   35 ELLSLLIVYFFWRIIAKSINKREKNTAPE--PSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCS 517
            +L+S+ +   F  ++ K   K  KN+  +  P G W  P IG +  L G  P  ++L  LA KYGP+  L+LG+   ++V+  ++ K+   T+D   A+R K++A   + YD    A +PYG+YW+ +RKI  TE+LS+  +     +R  EV   I  + S  S
Sbjct:    2 QLISIFLFICFLFLLRKW-KKYSKNSQTKKLPPGPWKLPFIGSMHHLAGGRPH-RVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSS 164          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.878e-17
Identity = 62/220 (28.18%), Postives = 103/220 (46.82%), Query Frame = 2
Query:   74 IIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIP--WL 727
            I+ K +   +    P P G  P+IG+L  L   + + K    ++ +YGP+  LRLG  P+++VS  E  ++   T+D    TR K  A     Y+      AP+G  WR++RKI T EL S  +L+  +++R  E +  +K +     E     + V + K++   T +I  +L  G+ F   D+ +      ++   + ES    G F   D  P  WL
Sbjct:   16 ILFKKLLPSKGKLPPGPIGL-PIIGNLHQLG--KLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDET--QNSSVDLRKVLFSFTASIICRLAFGQNFHQCDFVDME----KVEELVLESEANLGTFAFADFFPGGWL 226          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 3.878e-17
Identity = 68/237 (28.69%), Postives = 114/237 (48.10%), Query Frame = 2
Query:   38 LLSLLIVYFFWRIIAKSINKREKNTAPE-PSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            L+SL +      +  K + KR   T P+ P   W  P+IG+L  L G  P  + L +L+ +YGP+  L  G+ P+L+VS  ++  D   T+D   A R K  A              PYG+ W+ ++ +    LL++  +   +++R  E+    + L     E + + + V +SKL+  LT +I  ++  G++++    EE+G     I   +  S+  FG F  GD IP L  ID
Sbjct:    5 LISLCLTTLLAFLFLKPLLKRITTTKPKLPPSPWRLPVIGNLHQL-GPNPH-RYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKL----EEASSSSSSVNLSKLLMTLTNDIICRITLGRKYN----EEEG--GIDIKNLVMTSSEFFGKFFFGDFIPSLAWID 229          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.878e-17
Identity = 64/231 (27.71%), Postives = 116/231 (50.22%), Query Frame = 2
Query:   38 LLSLLIVYFFWRIIA-KSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWL 727
            L+SL +  F   ++  KS+ KR  +  P      P+IG+L  L+      + L +L+ ++GP+  LR G+ P+LIVS  ++  D   T+D   A R    +   +         APYG+YWR+++ + T  LLS+  ++  +  R  E+   ++ L     E + + + V +SKLI  +  +I  K++ GK++S    EE   +   I ++  ++    G+  +G+ IP L
Sbjct:    6 LISLCLTTFLTILLFFKSLLKRPNSNLPPSPWRLPVIGNLHQLSLHPH--RALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETL----EEASLSSSSVNLSKLITNMVSDIMGKVVLGKKYSG---EEGTIDVKTITKSFLDAV---GLSPVGEYIPSL 224          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.878e-17
Identity = 65/238 (27.31%), Postives = 114/238 (47.90%), Query Frame = 2
Query:   38 LLSLLIVYFFWRIIAKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATR--AKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            ++SL +       + K   KR  N    P   W  PLIG+L  L+      + L +L+ +YGP+  L  G+ PIL+VS  E  ++   T+D   A R  +K V G   G  + +F   PYG+YWR ++ +    LL++  +   + +R  E++  IK L    S ++       +S+L   L  +++ ++  G++ S      +   A  + + +++   L G F +GD +P L  ID
Sbjct:    6 MVSLCLTTLITLFLLKQFLKRTANKVNLPPSPWRLPLIGNLHQLSLHPH--RSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFG--PYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSEN----LSELFVTLPSDVTSRIALGRKHS------EDETARDLKKRVRQIMELLGEFPIGDYVPALAWID 229          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.615e-17
Identity = 63/199 (31.66%), Postives = 99/199 (49.75%), Query Frame = 2
Query:   29 IFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWP-------LIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAG 604
            + +L S LI+      I+  IN+  K   P+P G +P       LIGHL LL G+ P    L ++A +YGP+  ++LG+   +++S  E  K+     D   A R + +  + M YDN     +PY ++WR +RKI  +ELLSS  +     +R  EV   ++ L S         A V +++ IE LT +I  +   G
Sbjct:    3 LLQLWSALIILVVTYTISLLINQWRK---PKPQGKFPPGPPKLPLIGHLHLLWGKLPQ-HALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSSAG------AAVDMTERIETLTCSIICRAAFG 191          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16
Identity = 66/230 (28.70%), Postives = 110/230 (47.83%), Query Frame = 2
Query:   32 FELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIP 721
            F L++L  + FF    AK I   + N  P P   +P+IG+L  + G+ P  + L  LA++YGP+  L  G  P+ +VS  E  ++   T+D    +R K+V  + +  +       PYG  W+  RK A  EL    +++  +H+R  E +  +K L    SE+A N + V +SK +  LT +I  ++  G+ F    +E    +  +I   + E+      F   D  P
Sbjct:    8 FCLITLASLIFF----AKKIKHLKWNLPPSPP-KFPVIGNLHQI-GELPH-RSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQL----SESAVNRSPVDLSKSLFWLTASIFFRVALGQNF----HESNFIDKEKIEELVFEAETALASFTCSDFFP 222          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16
Identity = 70/239 (29.29%), Postives = 122/239 (51.05%), Query Frame = 2
Query:   38 LLSLLIVYFFWRIIAKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATR--AKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL-YSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            LL+LL++  F +  AK +N         P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ PIL+VS  E   +   T+D   A R  +K V G   G  + +F   PYG+YWR ++ +    LL++  +   + VR  EV+  ++ L  + CS +A N     +S+L   LT +++ ++  GK++    +E++   A  + + +++   L   F +GD +P L  ID
Sbjct:   14 LLTLLLLKKFLKRTAKKVNL--------PPSPWRIPVIGNLHQLSLHPH--RSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFG--PYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAEN-----LSELFVTLTSDVTSRVSLGKKY----WEDE--TAGGLKKRVRQIMELLREFPIGDYVPALAWID 229          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16
Identity = 64/237 (27.00%), Postives = 115/237 (48.52%), Query Frame = 2
Query:   41 LSLLIVYFFWRIIAKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATR--AKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            +SL +      ++ +   KR       P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ PIL+VS  E  ++   T+D   A R  +K V G   G  + +FA  PYG+YWR ++ +    LL++  +E  + VR  EV+  I+ L    S ++       +S+L   L  +++ ++  G++ S      +   A  + + +++   L G F +G+ +P L  ID
Sbjct:    7 ISLCLTTLITLLLLRRFLKRTATKVNLPPSPWRLPVIGNLHQLSLHPH--RSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFA--PYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSEN----LSELFITLPSDVTSRVALGRKHS------EDETARDLKKRVRQIMELLGEFPIGEYVPILAWID 229          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16
Identity = 60/216 (27.78%), Postives = 99/216 (45.83%), Query Frame = 2
Query:   86 SINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF--SAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWL 727
            ++ +R +   P     WP++G+L  +      C      A  YGPI S+  G    +IVS  E+ K+    +D++LA R +  +      D      A YG ++  +RK+ T EL S  RLE L+ +R  EV + +  +Y+ C+        +++ K +  + FN   +L  GKRF  S    +EQG E       ++    L     + + IPWL
Sbjct:   19 TLYQRLRFKLPPGPRPWPVVGNLYDIKPVRFRC--FAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSEGVMDEQGVE---FKAIVENGLKLGASLAMAEHIPWL 229          
The following BLAST results are available for this feature:
BLAST of FC930068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C71D6_SOLCH3.878e-1733.33Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71BZ_ARATH3.878e-1728.18Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71AR_ARATH3.878e-1728.69Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH3.878e-1727.71Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH3.878e-1727.31Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71DF_MENPI6.615e-1731.66Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71BK_ARATH1.128e-1628.70Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH1.474e-1629.29Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH1.474e-1627.00Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN3.283e-1627.78Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34003D11EF PostHarvC1 Citrus clementina cDNA clone C34003D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930068 ID=FC930068; Name=FC930068; organism=Citrus clementina; type=EST; length=740bp
GATGGATTCTACTTCTTTCACCCCAGCAATTTTTGAGCTCTTATCTCTGC
TAATTGTCTATTTTTTTTGGAGAATCATAGCAAAATCTATAAACAAAAGA
GAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGGCCA
TTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAGCAT
TGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCATCCC
ATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGATTGCTTCACTACCAA
TGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGCAGGCAAGTATATGG
GTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCAGTACTGGCGT
GATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCTTGA
ATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACACTTTCATCAAAGATT
TGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTGATC
AGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGCCTGAAACTGATAGC
TGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACAAGGCAGCGAGGCTT
GGCGTATCAATAGAGCAATAAAAGAAAGCACGCACCTATTCGGGGTTTTC
GTCTTGGGAGATGCCATACCATGGCTTGAATCGATTGACT
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