FC930068

Overview
NameFC930068
Unique NameFC930068
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13
Identity = 58/258 (22.48%), Postives = 114/258 (44.19%), Query Frame = 2
Query:   38 LLSLLIVYFFWRIIAKSINKREKNT--------APEPSGA-----------WPLIGHLPLLNGQEPICKILGALADKYGP-IYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYM--GYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINR--AIKESTHLFGVFVLGDAIPWLESID 739
            +L LL+       +A+++ +  K+T        A  P+G            WP++G+LP +   +P  + +  +  + G  I  ++LG   ++ ++  EI ++     D    +R    A +    GY NA+  L+PYG  W+ +R++ T+E++   R   L   R  E D   + +Y+L ++ A     V +  +      N+  +L+  +R+  +   + G     +    A+  S  L   F + D +PWL  +D
Sbjct:   24 ILKLLLFVVTLSYLARALRRPRKSTTKCSSTTCASPPAGVGNPPLPPGPVPWPVVGNLPEMLLNKPAFRWIHQMMREMGTDIACVKLGGVHVVSITCPEIAREVLRKQDANFISRPLTFASETFSGGYRNAV--LSPYGDQWKKMRRVLTSEIICPSRHAWLHDKRTDEADNLTRYVYNLATKAATGDVAVDVRHVARHYCGNVIRRLMFNRRYFGEPQADGGPGPMEVLHMDAVFTSLGLLYAFCVSDYLPWLRGLD 279          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12
Identity = 59/246 (23.98%), Postives = 108/246 (43.90%), Query Frame = 2
Query:    2 MDSTSFTPAIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            MD +        L  LL ++FF+   AK+       T P      PL+G++  L G  P  + L A +  YGPI SL+LG+   +++S  E  K+   T+D +++ R    A +   +        P    WR ++K  T  LLS   L+ ++ +R  +V+    +L SL +E       + +++     +FNI    +     +  D     S ++  +  +   T + G+  +GD   ++  +D
Sbjct:    1 MDLSLIQGMSLPLYFLLTLFFFFFATAKTRRSSSTGTLPPGPPILPLVGNIFQL-GFNPH-RSLAAFSKTYGPIMSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRAFDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVE----ELVSLVNEFRERGEAIDLARASFVTSFNIISNALFSVDLATYD---SNSSSYEFHNTVVHLTDIAGIPNVGDYFQYMRFLD 237          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12
Identity = 59/203 (29.06%), Postives = 101/203 (49.75%), Query Frame = 2
Query:   17 FTPAIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGA--WPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDN-AIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS 616
            F  A+F L    ++ FF      +  +  +   P P G    P+IG++ L+ G+ P       L+  YGPI SL+ G    ++V+  E  ++   T D+IL++R    + + + +D  ++  L P    WR +RK++ T+L S  R+E  K +R ++V    K+L S  SE++     V IS+     TF  +L +I+   FS
Sbjct:    5 FEQALFPLFCF-VLSFFIIFFTTTRPRSSRKVVPSPPGPPRLPIIGNIHLV-GRNPHHSFAD-LSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSINHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKV----KELVSFMSESSEREEAVDISR----ATFITALNIISNILFS 196          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12
Identity = 52/180 (28.89%), Postives = 86/180 (47.78%), Query Frame = 2
Query:   74 IIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 613
            II K I    +N  P P    P+IG+L  L G    C  L  L+ K+GP+  LRLG   ++++S  E  ++    +D    TR        +  D     LAPYG+  R++RK++  +  S+ ++   +++R  E D  +K L     E A   + V +S+ +  L  +I  +   G+RF
Sbjct:   14 IIIKKIKDSNRNLPPSPLKL-PVIGNLYQLRGLFHKC--LHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKL----KEAALKKSSVDLSQTLFGLVGSIIFRSAFGQRF 186          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71C3_MAIZE (Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12
Identity = 50/171 (29.24%), Postives = 80/171 (46.78%), Query Frame = 2
Query:  116 PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGP--IYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAK 622
            P P G  P++GHL  +  Q  I   L  L  KYG      LR G  P LIVS     +    T+D I A+R   +A   + Y+    A +P G+YW+  RK+  T LLS+ ++   +H R  EV   + +L    +++      V +S+++   T ++  + + G     K
Sbjct:   58 PSPPGTLPIVGHLHHIGPQTHIS--LQELVAKYGHNGFLFLRAGAVPTLIVSSPSAAEAVMRTHDHICASRPWSMASHILRYNTCDVAFSPLGEYWQQTRKLMNTHLLSNKKVYSFRHGREEEVCLVVDNLREAAAKSP--STAVDMSEVLAAYTNDVVSRSVLGSTHRKK 224          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.407e-12
Identity = 56/229 (24.45%), Postives = 101/229 (44.10%), Query Frame = 2
Query:   47 LLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD--YEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWL 727
            L+ V     +++  + +R +   P      P++G+L  +      C      A  YGPI S+ +G    ++VS  E+ K+    +D+ LA R +  + +    +      A YG ++  +RK+ T EL +  RLE L+ +R  EV   ++ ++  C+        + + K +  + FN   +L  GKRF   +   +EQG E       +     L     + + IPWL
Sbjct:    5 LIAVATIAAVVSYKLIQRLRYKFPPGPSPKPIVGNLYDIKPVRFRCYY--EWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLE---FKAIVSNGLKLGASLSIAEHIPWL 228          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12
Identity = 57/222 (25.68%), Postives = 103/222 (46.40%), Query Frame = 2
Query:   92 NKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGP--IYSLRLGKHPILIVSGWEIVKDCFTT----NDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIPWLESID 739
            +KR +   P P G WP+IG L  ++   P  K L +LA  +G   + S  LG  P +I S  E+ ++  T+    N  +  +  +++ G+ +G+       AP G YWR +R+IA+  L +  R+   +  R ++V   + D+     +   +   V + + ++    N  +  + G+RF   D   +  E  ++   + E   L G F   D +PWL  +D
Sbjct:   72 HKRGRVAIPGPKG-WPIIGSLMDMSVGLPHRK-LESLARLHGAKQLMSFSLGCTPAVITSDPEVARELLTSPHFANRPLKQSAQQLLFGRAIGF-------APNGGYWRLLRRIASAHLFAPRRIAAHEAGRQADVVAMLDDI----QKEYHSKGVVRVRRHLQGAALNNIMGSVFGRRF---DMSHENEEVKKLREMVDEGFQLLGAFNWADHLPWLRPLD 277          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12
Identity = 63/213 (29.58%), Postives = 97/213 (45.54%), Query Frame = 2
Query:  116 PEPSGAWPLIGHLPLLNGQEPICKILGALADKYGP-IYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTH----LFGVFVLGDAIPWLESID 739
            P P    P+IGHL L+ G  P    L ALA +YGP +  LRLG  P ++VS   + +    T D + ++R + +    + Y       APYG ++R  RK+ T  LL++ ++   +  R  EV    +         A     V +S+L+     N+  + ++GK FS     E+G      NR  +E T     L G F + D  P L  I+
Sbjct:   69 PSPPMKLPIIGHLHLM-GDIPYVS-LAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDIIMYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEV----RGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSGK-FSM----EEGR-----NRLFRELTDINAGLLGGFHIQDYFPRLGRIE 265          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.093e-11
Identity = 57/234 (24.36%), Postives = 106/234 (45.30%), Query Frame = 2
Query:   38 LLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRA-IKESTHLFGVFV---LGDAIPWL 727
            +L  LI+     I  K +   +    P P    P IG+L  L    P       L  KYGP+  LR G  P++++S  E  ++    +D    +R +    + + Y+      APYG+ W+ +RK++  EL ++ + +  + +R  E D  +K L    +E A   + V + K +  L  +I  ++  G      ++ ++ S +  ++++ I E T +F  F    +G  I W+
Sbjct:    4 ILCFLILLPLILIFLKKLKHSKWKLPPGPPKL-PFIGNLHQLQELPP-----RNLNHKYGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSRPETAGTRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEENDLLVKKL----TELALTRSPVNLKKTLFTLVGSIVCRIGFGFNLHECEFIDENSISDLVDKSEILEMTSMFSDFFPGGIGRFIDWI 227          
BLAST of FC930068 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.093e-11
Identity = 58/232 (25.00%), Postives = 107/232 (46.12%), Query Frame = 2
Query:   26 AIFELLSLLIVYFFWRIIAKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKESTHLFGVFVLGDAIP 721
            AI  L   LI +    I+   I +   N  P P    P+IG+L  + G+ P  +    LA++ G +  L LG  P+ ++S  E  ++   T+D    +R  +V  + +          PYG+ W++ R+    EL  S +L+   +++  E +  +K L    SE+A + + V +SK +  L  +I  ++  G+ F    +E + ++  +I+  + E+    G F   D  P
Sbjct:    2 AISLLCLFLITFVSLTIVGCKIKRSIWNLPPSPPKL-PVIGNLHQV-GELPH-RSFRRLAERTGHVMLLHLGFVPVTVISSREAAEEVLRTHDLDCCSRPNLVGSRLISRGFKDLNFTPYGEEWKERRRFLVGELFCSKKLQSFIYIKEVECNFLVKKL----SESAVDQSPVDLSKTLFWLAASILFRVAFGQSF----HESEFTDTDKIDELVFETETAQGSFTCSDFFP 222          
The following BLAST results are available for this feature:
BLAST of FC930068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
C79A1_SORBI9.885e-1322.48Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C76C3_ARATH3.756e-1223.98Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH3.756e-1229.06Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C71BO_ARATH3.756e-1228.89Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71C3_MAIZE4.906e-1229.24Cytochrome P450 71C3 OS=Zea mays GN=CYP71C3 PE=2 S... [more]
C98A3_ARATH6.407e-1224.45Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C78A4_PINRA8.368e-1225.68Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71C4_MAIZE8.368e-1229.58Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]
C71BT_ARATH1.093e-1124.36Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71BH_ARATH1.093e-1125.00Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC34003D11EF PostHarvC1 Citrus clementina cDNA clone C34003D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930068 ID=FC930068; Name=FC930068; organism=Citrus clementina; type=EST; length=740bp
GATGGATTCTACTTCTTTCACCCCAGCAATTTTTGAGCTCTTATCTCTGC
TAATTGTCTATTTTTTTTGGAGAATCATAGCAAAATCTATAAACAAAAGA
GAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGGCCACTCATCGGCCA
TTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAAAATACTTGGAGCAT
TGGCCGATAAATATGGGCCCATCTATTCTCTTAGACTTGGCAAGCATCCC
ATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGATTGCTTCACTACCAA
TGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGCAGGCAAGTATATGG
GTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCAGTACTGGCGT
GATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCGGCTTGA
ATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACACTTTCATCAAAGATT
TGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTGGTGATC
AGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGCCTGAAACTGATAGC
TGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACAAGGCAGCGAGGCTT
GGCGTATCAATAGAGCAATAAAAGAAAGCACGCACCTATTCGGGGTTTTC
GTCTTGGGAGATGCCATACCATGGCTTGAATCGATTGACT
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