FC930069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930069 vs. ExPASy Swiss-Prot
Match: TCPA_DICDI (T-complex protein 1 subunit alpha OS=Dictyostelium discoideum GN=tcp1 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.697e-30 Identity = 69/178 (38.76%), Postives = 114/178 (64.04%), Query Frame = 2 Query: 179 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL-ERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKG 709 R+ G + + NV A A+A I++TS GP G+DKML G + +TNDGATIL+++D+++ AK++V+LS QD E+GDGTT VV++A LL++A +L+ R +HP I G+ +A A++++ E +A K E D +V T+++SK +N ++I ++A+ V ++ KG Sbjct: 12 RISGNEVRAQNVLAVTAIANIVKTSFGPIGLDKMLIDNIGSIVVTNDGATILQKIDIEHPAAKILVQLSELQDQEVGDGTTTVVILAAELLKRANELVARKVHPTVIISGFRLACTEAIKYINETLAVKVETLPKDF--IVNIAKTSMSSKTINDDSDFFSKIVIEAITRVKTIDYKG 187
BLAST of FC930069 vs. ExPASy Swiss-Prot
Match: TCPA_YEAST (T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae GN=TCP1 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.136e-29 Identity = 71/177 (40.11%), Postives = 107/177 (60.45%), Query Frame = 2 Query: 179 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKG 709 ++ G D + NV A AVA ++++SLGP G+DKML GD T+TNDGATIL +DV + K++VEL++ QD EIGDGTT VV++A LL++A +L++ IHP I G+ +A R A+ + + L E L+ T+++SK++ + + V A+LAV KG Sbjct: 19 KISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGK-ETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKG 194
BLAST of FC930069 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.483e-29 Identity = 71/187 (37.97%), Postives = 119/187 (63.64%), Query Frame = 2 Query: 143 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA--QKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADL 697 P ILL++ + S+ G+ +N+SA + +A +RT+LGP+GMDK++ G TI+NDGATIL+ +DV + AK +V++++SQD E+GDGTT V ++A L+Q + +E G+HP I + A+++AV ++ IA K + + L + MT L+SK++++ K A++ V AV+ + DL Sbjct: 5 PVILLKEGTDSSQ--GIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDL 189
BLAST of FC930069 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.483e-29 Identity = 71/187 (37.97%), Postives = 119/187 (63.64%), Query Frame = 2 Query: 143 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA--QKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADL 697 P ILL++ + S+ G+ +N+SA + +A +RT+LGP+GMDK++ G TI+NDGATIL+ +DV + AK +V++++SQD E+GDGTT V ++A L+Q + +E G+HP I + A+++AV ++ IA K + + L + MT L+SK++++ K A++ V AV+ + DL Sbjct: 5 PVILLKEGTDSSQ--GIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDL 189
BLAST of FC930069 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.937e-29 Identity = 71/197 (36.04%), Postives = 114/197 (57.87%), Query Frame = 2 Query: 140 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKGCHLDLIK 730 RP ++L Q ++ G Q N++A K +A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+GDGTT V+++AG +L AE LE+ +HP + Y MA + L++I+ + +N+ E ++ +++ +K+++R IA+ AV V E +D+ K Sbjct: 5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALDDMISTLKKISTPVD--VNNREMMLSIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKK 197
BLAST of FC930069 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.530e-29 Identity = 70/187 (37.43%), Postives = 120/187 (64.17%), Query Frame = 2 Query: 143 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIA--QKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADL 697 P ILL++ + S+ G+ +N+SA + +A +RT+LGP+GMDK++ G TI+NDGATIL+ +DV + AK +V++++SQD E+GDGTT V ++A L+Q + +E G+HP I + A+++AV ++ IA K + + + L + MT L+SK++++ K A++ V AV+ + +L Sbjct: 5 PVILLKEGTDSSQ--GIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKQDKVEQRKMLEKCAMTALSSKLISQQKVFFAKMVVDAVMMLDEL 189
BLAST of FC930069 vs. ExPASy Swiss-Prot
Match: TCPG_RAT (T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.305e-29 Identity = 71/197 (36.04%), Postives = 114/197 (57.87%), Query Frame = 2 Query: 140 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKGCHLDLIK 730 RP ++L Q ++ G Q N++A K +A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+GDGTT V+++AG +L AE LE+ +HP + Y MA V L++I+ + +N+ + ++ +++ +K+++R IA+ AV V E +D+ K Sbjct: 5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALDDMVSTLKKISTPVD--VNNRDMMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKK 197
BLAST of FC930069 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.305e-29 Identity = 68/172 (39.53%), Postives = 112/172 (65.12%), Query Frame = 2 Query: 179 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL--EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAV 688 R G + NV+A A+A I+++SLGP G+DKML GDV +TNDGATIL+Q++V++ K++VEL++ QD E+GDGTT VV++A LL++A++L+++ +HP I GY +A + AV++ I++ F + + + +V T+++SK++ E+ V A AV Sbjct: 15 RTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKY---ISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAV 183
BLAST of FC930069 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.316e-29 Identity = 80/193 (41.45%), Postives = 115/193 (59.59%), Query Frame = 2 Query: 152 LLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKM--VNRCKRRLAEIAVKAVLAVADLERKGCHLDL 724 LLR+ ++S G + N++ K + +L++SLGPKG+DKML DVTITNDGATI++ M+V + AKL++E +++ D E+GDGTT VVV+AG LLE+AE LL + IHP I EGY A ++E L+ IA K D + + TTL+SK ++ + + A LAV D LD+ Sbjct: 4 LLREGTQRST--GNEVILNNIAVAKILLEMLKSSLGPKGLDKMLVEGQ-DVTITNDGATIVKNMEVQHPTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALNSSLELLKNIADK--ISPEDRKIVHDLVYTTLSSKFFSTEHTLEKIINLVIDASLAVLDKRDGSYDLDI 191
BLAST of FC930069 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.316e-29 Identity = 67/183 (36.61%), Postives = 114/183 (62.30%), Query Frame = 2 Query: 140 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAV 688 +P ++L Q ++ G AQ AN+SA KAV+ I+ ++LGP+ M KML P G + +TNDG IL ++DV++ AK M+EL+R QD E+GDGTT V++MAG ++ A+ +ER IHP I Y A +++ +E +A + +N+ + + + + + +K +R + + ++A+KAV + Sbjct: 7 QPIMVLNQNTKRES--GKKAQLANISASKAVSEIVTSTLGPRSMLKMLLDPMGGIVMTNDGNAILREIDVNHPAAKSMIELARVQDEEVGDGTTSVIIMAGEMMSAAKPFIERDIHPSIIVTAYYRALEESIKKIEELAVPID--VNNDDQVNKALSSCIGTKFTSRWGKLITDLALKAVRTI 185 The following BLAST results are available for this feature:
BLAST of FC930069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 440
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930069 ID=FC930069; Name=FC930069; organism=Citrus clementina; type=EST; length=732bpback to top |