FC930071

Overview
NameFC930071
Unique NameFC930071
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.629e-15
Identity = 50/169 (29.59%), Postives = 88/169 (52.07%), Query Frame = 1
Query:  193 FVRFQDERPKVA-YNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKG--GFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKE 690
            F+R + E+P +  +   +  IPV+ L+  D+   +RA     +V+A E+WG+FQVV+HG+  +LI  +  +  +FF LP  EK         K   G+        E  K W + + +  +P    +Y  WP  P  + EV +EY+  +  ++  LL +LS+ +GL+++
Sbjct:   23 FIRSEKEQPAITTFRGPTPAIPVVDLSDPDEESVRRA-----VVKASEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRD 186          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.779e-15
Identity = 52/172 (30.23%), Postives = 88/172 (51.16%), Query Frame = 1
Query:  178 TLNPSFVRFQDERPKVA-YNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEV--VKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLE 684
            T+   ++R ++E+P ++  +    E+PVI L+  D+      +I   + EA ++WGIFQVV+HG+  ++I  +  +   FF LP EEK       G +      + LQ EV   K W + + +  +P  + +Y  WP  P  + E  +EY+ +L  V   L + LS  + LE
Sbjct:   18 TIPAEYIRSENEQPVISTVHGVVLEVPVIDLSDSDE-----KKIVGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFELPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQFWPKNPPAYREANEEYAKRLQLVVDNLFKYLSLGLDLE 184          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.630e-15
Identity = 55/173 (31.79%), Postives = 85/173 (49.13%), Query Frame = 1
Query:  175 KTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEL 693
            K L   +VR + E   V   + S EIPVI L+ + D      E+ K    AC DWG FQ+++HGV  ++I  M     +FF LP +EK  +        G+  +     E   DW ++    + P Q R+   WP  P  + E  ++YS +L  VA  L  ++++ +GLE E+
Sbjct:   26 KNLPNRYVRPELEHDDVVPIDNSLEIPVIDLSRLLDQQYACDELAK-FHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEI 197          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15
Identity = 50/185 (27.03%), Postives = 94/185 (50.81%), Query Frame = 1
Query:  178 TLNPSFVRFQDERPKVA-YNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFA-LPPEEKLKFDMSGGKKG--GFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKEL*LSMCGLDQ 720
            T+   ++R ++E+P     +    ++PVI L   D+      ++ K I +A ++WGIFQ+++HG+  + I+D+ ++  EFF  +P EEK     + G     G+  S   + E  K W + + +  +P  + +Y  WP  P  + E  +EY  ++  V  ++ + LS  +GLE    +   G D+
Sbjct:   30 TIPSEYIRSENEQPAATTLHGVVLQVPVIDLRDPDE-----NKMVKLIADASKEWGIFQLINHGIPDEAIADLQKVGKEFFEHVPQEEKELIAKTPGSNDIEGYGTSLQKEVEGKKGWVDHLFHKIWPPSAVNYRYWPKNPPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDE 209          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.846e-14
Identity = 50/178 (28.09%), Postives = 88/178 (49.44%), Query Frame = 1
Query:  172 EKTLNPSFVRFQDERPKVA-YNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKF-----DMSGGKKGGFIVSSHLQGEVV-KDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLE 684
            E T+   F+R ++E+P +   +    E+P+I  +  D+      ++  +I EA  +WG++Q+V+H + +++IS +  +  EFF LP EEK  +       S    G  +     +G+   K W + +    +P    +Y  WP  P  + E  +EY+  L  V  KL  +LS  +GLE
Sbjct:   14 EGTIPAEFIRSENEQPGITTVHGKVLEVPIIDFSDPDE-----EKLIVQITEASSNWGMYQIVNHDIPSEVISKLQAVGKEFFELPQEEKEAYAKPPDSASIEGYGTKLFKEISEGDTTKKGWVDNLFNKIWPPSVVNYQFWPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLE 186          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.846e-14
Identity = 44/150 (29.33%), Postives = 78/150 (52.00%), Query Frame = 1
Query:  250 IPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVK----DWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEK 687
            IPVI  + +D  G +RAE   +I   CE+WG FQ+V+HG+  +L+  + ++++E + L  E        G K    + +   +G+  +    DW ++          +D + WP  P  + E  KEY +++  +A K++EV+ E +G EK
Sbjct:    3 IPVIDFSKLD--GKERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKLREER-----FEGSKPVQLLDTLVKEGDGQRLDNVDWEDVFVL-------QDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEK 138          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.291e-12
Identity = 49/189 (25.93%), Postives = 96/189 (50.79%), Query Frame = 1
Query:  136 LMAPSTLTALAAEKTLN---PSFVRFQDERPKVAYN-EFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKE 690
            ++ PS +  +  EKT+    P +VR   ++ +V  + +   EIP+I +  +       +E+ +K+  AC++WG FQ+V+HG+D+  +  +     +FF LP EEK KF     +  GF  +  +  +   DW ++  +   P + R    +P  P  + +  + YS ++  VA  L+  ++ A+ ++ E
Sbjct:   12 ILVPS-VQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEV-EKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPE 198          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12
Identity = 41/140 (29.29%), Postives = 72/140 (51.43%), Query Frame = 1
Query:  274 IDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLK-FDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKE 690
            I D+   R E+ + I+++ +++G  QVV+HG+   ++ +M  +  EFF +P E+K + F     ++      S  +    K W +++    YP  S D   WP KP+   EV   Y+    GVA ++L +L E +GL  +
Sbjct:   37 IIDMSRGRDEVRQAILDSGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAFETLGEKYWIDVLELL-YPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPD 175          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12
Identity = 54/182 (29.67%), Postives = 86/182 (47.25%), Query Frame = 1
Query:  154 LTALAAEKTLNPSFVRFQDERPKVAYNEFSNEIPVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSS---HLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEKE 690
            L A  A  +L  SFV   D+ P       S  +P+I      D+   R E+ + I+EA ++ G FQVV+HGV  +++ DM  +  +FF LP  +K         K   + S       GE  K WR+ +            + WPD P+G  +V ++++ Q   V  +LL +L E MG++ +
Sbjct:    5 LHATPAHVSLPESFVFASDKVPPATKAVVS--LPII------DLSCGRDEVRRSILEAGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGE--KYWRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQAD 176          
BLAST of FC930071 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.906e-12
Identity = 46/145 (31.72%), Postives = 81/145 (55.86%), Query Frame = 1
Query:  253 PVISLAGIDDVGGKRAEICKKIVEACEDWGIFQVVDHGVDAKLISDMTRLATEFFALPPEEKLKFDMSGGKKGGFIVSSHLQGEVVKDWREIVTYFSYPKQSRDYSRWPDKPEGWMEVTKEYSDQLMGVACKLLEVLSEAMGLEK 687
            PV+ L+ ++  G +RA   +KI +ACE+WG F++V+HG+  +L+  + ++  + +    E++ K  ++   KG   V S +      DW    T+F     S + S  PD  E + +  KE++ +L  +A KLL++L E +GLEK
Sbjct:    5 PVVDLSLVN--GEERAATLEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFKEMVAA--KGLDDVQSEIHD---LDWES--TFFLRHLPSSNISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEK 140          
The following BLAST results are available for this feature:
BLAST of FC930071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
FLS1_ARATH1.629e-1529.59Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FLS_EUSGR2.779e-1530.23Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
NCS1_COPJA3.630e-1531.79S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
FLS_PETHY8.087e-1527.03Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
FLS_MALDO6.846e-1428.09Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
ACCO_MUSAC6.846e-1429.331-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
SRG1_ARATH1.291e-1225.93Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
IDS2_HORVU2.202e-1229.29Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
IDS3_HORVU2.876e-1229.672'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
ACCO1_MALDO4.906e-1231.721-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]

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Properties
Property NameValue
Genbank descriptionC34003E02EF PostHarvC1 Citrus clementina cDNA clone C34003E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930071 ID=FC930071; Name=FC930071; organism=Citrus clementina; type=EST; length=738bp
GAAACATGCACATTAACCGCCCACAACACAAGCGGCAGTTGCGCATCACC
CTTGGACTCACTCTTTTGCTTTTAAACAGATACATATACATTTGCTCTAA
TATATTATTATTATTTGTGCTTCGTTGATCATCAATTAATGGCTCCTTCA
ACCCTCACCGCCCTTGCTGCGGAGAAAACCCTCAACCCAAGCTTTGTCCG
CTTTCAAGATGAGCGTCCCAAGGTGGCTTATAATGAATTCAGCAATGAAA
TTCCTGTGATTTCACTTGCTGGGATCGATGACGTCGGTGGCAAAAGGGCT
GAGATTTGCAAGAAAATTGTTGAGGCGTGTGAGGACTGGGGAATCTTTCA
AGTTGTTGATCATGGTGTTGATGCTAAGCTTATATCCGATATGACTCGTC
TTGCTACAGAATTTTTCGCCCTGCCCCCTGAGGAGAAGCTCAAGTTTGAT
ATGTCCGGTGGGAAGAAGGGTGGCTTCATTGTCTCCAGCCACCTTCAGGG
TGAAGTAGTAAAAGATTGGCGTGAAATAGTGACGTATTTTTCATACCCAA
AGCAAAGCCGAGACTACTCTCGTTGGCCGGACAAGCCAGAAGGGTGGATG
GAAGTAACAAAAGAATACAGTGACCAATTAATGGGAGTGGCGTGCAAGCT
TCTAGAAGTTTTATCAGAGGCAATGGGATTGGAGAAGGAGCTTTGACTAA
GCATGTGTGGACTGGACCAAAAGATGTGTCATTACTAT
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