FC930072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACDA_BACSU (Acyl-CoA dehydrogenase OS=Bacillus subtilis GN=acdA PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.849e-35 Identity = 51/135 (37.78%), Postives = 78/135 (57.78%), Query Frame = 3 Query: 30 DVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 D L++ M N L GI P++ + IA+EE+S+ S G++ AH +LC L G+ QK +YL +L GE +GA A++E +GSD MK A+R+ Y++NG+K++ TNG VA +V+A T Sbjct: 38 DRELFREMANLGLTGIPWPEDYGGIGSDYLAYVIAVEELSKVCASTGVTLSAHISLCSWPLFAFGTEEQKTEYLTQLALGEKIGAFALTEAGSGSDAGSMKTTAERIGDDYVLNGSKVFITNGGVADIYIVFAVT 172 HSP 2 Score: 69.3218 bits (168), Expect = 6.849e-35 Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 452 KGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 KG+TAFI+EK GF T +K KLG+R S T E++FE+C VP LG+EG+G + M LD R +AA Sbjct: 179 KGVTAFIVEKDFEGFFTGKKEKKLGIRSSPTTEIMFEDCVVPASKRLGEEGEGFKIAMKTLDGGRNGIAA 248
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACDS_MEGEL (Acyl-CoA dehydrogenase, short-chain specific OS=Megasphaera elsdenii PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.468e-31 Identity = 39/105 (37.14%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 123 HCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG-YIINGNKMWCTNGPVAQTLVVYAKT 434 + +A+EE+++ V ++ A +LC N + + G+ AQK+K+L L+ G +GA ++EPNAG+D G + A + D G Y +NG+K++ TNG A +V+A T Sbjct: 72 YILAVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMT 176 HSP 2 Score: 75.485 bits (184), Expect = 2.468e-31 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 446 GSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 G+ GITAFI+E G PGF+ +K DK+G+ S T ELVF++ VP EN+LG+EGKG + M LD R+ +AA Sbjct: 181 GNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAA 252
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADS_PONAB (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pongo abelii GN=ACADS PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.444e-31 Identity = 46/137 (33.58%), Postives = 66/137 (48.18%), Query Frame = 3 Query: 45 KLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTTLKLAQK 455 K MG L + P+E + IAMEEISR S G+ +++L + +++ GS QK K++ SG+ +G A+SEP GSD A +++NG K W TN A VV+A T L K Sbjct: 72 KKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQKWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNK 208 HSP 2 Score: 70.4774 bits (171), Expect = 5.444e-31 Identity = 30/71 (42.25%), Postives = 49/71 (69.01%), Query Frame = 2 Query: 449 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 +KGI+AF++ PG + +K DKLG+RGS T L+FE+C +P +++LG+ G G + M LD+ R+ +A+ Sbjct: 207 NKGISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIAS 277
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADS_HUMAN (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADS PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.654e-30 Identity = 45/137 (32.85%), Postives = 65/137 (47.45%), Query Frame = 3 Query: 45 KLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTTLKLAQK 455 K MG L + P+E + IAMEEISR S G+ +++L + +++ GS QK ++ SG+ +G A+SEP GSD A +++NG K W TN A VV+A T L K Sbjct: 72 KKMGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNK 208 HSP 2 Score: 70.4774 bits (171), Expect = 2.654e-30 Identity = 30/71 (42.25%), Postives = 49/71 (69.01%), Query Frame = 2 Query: 449 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 +KGI+AF++ PG + +K DKLG+RGS T L+FE+C +P +++LG+ G G + M LD+ R+ +A+ Sbjct: 207 NKGISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIAS 277
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: FADE_BACSU (Probable acyl-CoA dehydrogenase OS=Bacillus subtilis GN=fadE PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.436e-30 Identity = 56/135 (41.48%), Postives = 69/135 (51.11%), Query Frame = 3 Query: 33 VNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAK 431 V L K G L G P+E + E+ SRA GS LSYGAH + +V GS QK KYLP L SGE + A A++EP +GSD +G K A + G Y++ G K W TN A VVYAK Sbjct: 65 VRLLKKAGELGLLGADVPEEYGGLGLDKISSALITEKFSRA-GSFSLSYGAHVGIGSLPIVFFGSEEQKKKYLPGLASGEKIAAYALTEPGSGSDALGAKTTAVLNEAGTHYVLTGEKQWITNSAFADVFVVYAK 198 HSP 2 Score: 59.3066 bits (142), Expect = 3.436e-30 Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 2 Query: 440 KAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAG 664 K +AFI+EK PG ST + K+G++GS T L+ + VP EN+LG+ GKG + + L++ R LA G Sbjct: 198 KVDGDKFSAFIVEKEFPGVSTGPEEKKMGIKGSSTRTLILDQAEVPKENLLGEIGKGHVIAFNILNIGRYKLAVG 272
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADS_MOUSE (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acads PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.858e-30 Identity = 42/130 (32.31%), Postives = 65/130 (50.00%), Query Frame = 3 Query: 45 KLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 K MG L + P+E + IA+EEISRA S G+ +++L + +++ GS QK +++ +G+ +G A+SEP GSD A +++NG K W TN A VV+A T Sbjct: 72 KKMGELGLLAMDVPEELSGAGLGYLAYSIALEEISRACASTGVIMSVNNSLYLGPILKFGSAQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFAST 201 HSP 2 Score: 70.4774 bits (171), Expect = 5.858e-30 Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 2 Query: 449 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 +KGI+AF++ PG + +K DKLG+R S T L+FE+C +P EN+LG+ G G + M LD+ R+ +A+ Sbjct: 207 NKGISAFLVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGMGFKIAMQTLDMGRIGIAS 277
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADS_RAT (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acads PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.684e-29 Identity = 41/130 (31.54%), Postives = 64/130 (49.23%), Query Frame = 3 Query: 45 KLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 K MG L + P+E + IA+EEISR S G+ +++L + +++ GS QK +++ +G+ +G A+SEP GSD A +++NG K W TN A VV+A T Sbjct: 72 KKMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRGCASTGVIMSVNNSLYLGPILKFGSSQQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVFAST 201 HSP 2 Score: 70.4774 bits (171), Expect = 1.684e-29 Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 2 Query: 449 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 +KGI+AF++ PG + +K DKLG+R S T L+FE+C +P EN+LG+ G G + M LD+ R+ +A+ Sbjct: 207 NKGISAFLVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGMGFKIAMQTLDMGRIGIAS 277
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADS_PIG (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADS PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.298e-29 Identity = 45/137 (32.85%), Postives = 65/137 (47.45%), Query Frame = 3 Query: 45 KLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTTLKLAQK 455 K MG L + P+E + IAMEEISR S G+ ++ L + +++ GS QK +++ SG+ VG A+SEP GSD A ++++G K W TN A VV+A T L K Sbjct: 72 KKMGELGLMAMDVPEELSGAGLDYLAYTIAMEEISRGCASTGVIMSVNNFLYLGPILKFGSKEQKQQWITPFTSGDKVGCFALSEPGNGSDAGAAATTAQADHDSWVLSGTKAWITNAWEASAAVVFASTDRSLQNK 208 HSP 2 Score: 67.3958 bits (163), Expect = 6.298e-29 Identity = 30/71 (42.25%), Postives = 47/71 (66.20%), Query Frame = 2 Query: 449 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 +KGI+AF++ G + +K DKLG+R S T L+FE+C +P EN+LG+ G G + M LD+ R+ +A+ Sbjct: 207 NKGISAFLVPMPTAGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGMGFKIAMKTLDMGRIGIAS 277
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACDC_BACSU (Probable acyl-CoA dehydrogenase yngJ OS=Bacillus subtilis GN=yngJ PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.069e-28 Identity = 52/131 (39.69%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 42 WKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 +K MG L GI P+E + +A+EE+ +A GS GLSY A +L + L G+ QK +L L SG +G+ ++EPNAGSD G + KA Y+ING K W TN A+T++V A T Sbjct: 42 FKKMGELGLMGIPFPEEYGGSGGDTISYALAVEEVGKACGSTGLSYAAAVSLGASPLYYFGTEEQKQTHLTPLASGTALGSFGLTEPNAGSDAGGTQTKAISNGDEYVINGEKCWITNASYARTVIVTAVT 172 HSP 2 Score: 52.373 bits (124), Expect = 1.069e-28 Identity = 28/74 (37.84%), Postives = 41/74 (55.41%), Query Frame = 2 Query: 440 KAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 K G I+A I+ PG + DK+G+RGS+T E++ E+ VP N+LG KG + LD R+ +AA Sbjct: 176 KDGKNIISALIVPTDTPGLTITSPYDKMGVRGSNTAEILLEDVRVPAANLLGDPTKGFKQFLYTLDGGRISIAA 249
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACAD9_HUMAN (Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Homo sapiens GN=ACAD9 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.381e-28 Identity = 48/139 (34.53%), Postives = 75/139 (53.96%), Query Frame = 3 Query: 24 LQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDG--GYIINGNKMWCTNGPVAQTLVVYAKT 434 + D L KL + L G+ P+E + + EI GS+ ++ AH + + ++ G+ QK KYLPKL SGEH+ A ++EP +GSD ++ +A + YI+NG+K+W TNG +A V+AKT Sbjct: 93 IPDETLEKLK-SLGLFGLQVPEEYGGLGFSNTMYS-RLGEIISMDGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDAASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKT 229 HSP 2 Score: 63.1586 bits (152), Expect = 1.381e-28 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 2 Query: 458 ITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 ITAFI+E+ G + + DKLG+RGS+TCE+ FEN +P EN+LG+ G G V M+ L+ R + + Sbjct: 242 ITAFIVERDFGGVTNGKPEDKLGIRGSNTCEVHFENTKIPVENILGEVGDGFKVAMNILNSGRFSMGS 309 The following BLAST results are available for this feature:
BLAST of FC930072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930072 ID=FC930072; Name=FC930072; organism=Citrus clementina; type=EST; length=668bpback to top |