FC930072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADL_MOUSE (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadl PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 2.354e-28 Identity = 39/132 (29.55%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 39 LWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 +W+ G L GI ++ + EE S G + HS++ + + +G+ Q +K++P++ +G+ +GA+AM+EP AGSD+ G++ A R +I+NG+K++ TNG ++ ++V A T Sbjct: 89 VWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEE-QAYSNCTGPGFSLHSDIVMPYIANYGTKEQIEKFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKRSGSDWILNGSKVFITNGWLSDLVIVVAVT 219 HSP 2 Score: 68.9366 bits (167), Expect = 2.354e-28 Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = 2 Query: 440 KAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLA 658 ++ + GI+ F++E GM GF +KL K+GM+ DT EL FE+ +P +LG+E KG Y +M L ERL++A Sbjct: 224 RSPAHGISLFLVENGMKGFIKGRKLHKMGMKAQDTAELFFEDVRLPANALLGEENKGFYYLMQELPQERLLIA 296
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADL_RAT (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadl PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.065e-28 Identity = 39/132 (29.55%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 39 LWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 LW+ G L GI ++ + EE S G + HS++ + + +G+ Q ++++P++ +G+ +GA+AM+EP AGSD+ G++ A R +I+NG+K++ TNG ++ ++V A T Sbjct: 89 LWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEE-QAYSNCTGPGFSLHSDIVMPYIANYGTKEQIEQFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKRSGSDWILNGSKVFITNGWLSDLVIVVAVT 219 HSP 2 Score: 68.9366 bits (167), Expect = 3.065e-28 Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = 2 Query: 440 KAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLA 658 ++ + GI+ F++E GM GF +KL K+GM+ DT EL FE+ +P +LG+E KG Y +M L ERL++A Sbjct: 224 RSPAHGISLFLVENGMKGFIKGKKLHKMGMKAQDTAELFFEDVRLPASALLGEENKGFYYLMQELPQERLLIA 296
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADL_HUMAN (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADL PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.146e-27 Identity = 39/132 (29.55%), Postives = 73/132 (55.30%), Query Frame = 3 Query: 39 LWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 +W+ G L G+ + I EE + ++ S G + HS + ++ + HGS Q ++P++ +G+ +GA+AM+EP AGSD+ G+K A + +I+NG+K++ +NG ++ ++V A T Sbjct: 89 VWEKAGKQGLLGVNIAEHLGGIGGDLYSAAIVWEEQAYSNCS-GPGFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGSDLQGIKTNAKKDGSDWILNGSKVFISNGSLSDVVIVVAVT 219 HSP 2 Score: 67.0106 bits (162), Expect = 1.146e-27 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 2 Query: 455 GITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLA 658 GI+ F++E GM GF +KL K+G++ DT EL FE+ +P +LG+E KG Y +M L ERL++A Sbjct: 229 GISLFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGEENKGFYYIMKELPQERLLIA 296
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADS_BOVIN (Short-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADS PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.493e-27 Identity = 46/138 (33.33%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 45 KLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDG-GYIINGNKMWCTNGPVAQTLVVYAKTTLKLAQK 455 K MG L + P+E + IAMEEISR S G+ +++L + +++ G+ QK +++ SG+ +G A+SEP GSD G R DG ++++G K W TN A +VV+A T L K Sbjct: 72 KKMGELGLMAMNVPEELSGAGLDYLAYSIAMEEISRGCASTGVIMSVNNSLYLGPILKFGTKEQKQQWVAPFTSGDKIGCFALSEPGNGSD-AGAAATTARADGDSWVLSGTKAWITNAWEASAVVVFASTDRSLHNK 208 HSP 2 Score: 61.2326 bits (147), Expect = 1.493e-27 Identity = 28/71 (39.44%), Postives = 46/71 (64.79%), Query Frame = 2 Query: 449 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 +KGI+AF++ PG + +K DKLG+R S T L+FE+ +P +++LG+ G G + M LD R+ +A+ Sbjct: 207 NKGISAFLVPMPTPGLTLGKKEDKLGIRASSTANLIFEDRRIPKDSLLGEPGLGFKIAMQTLDTGRIGIAS 277
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACAD9_MOUSE (Acyl-CoA dehydrogenase family member 9, mitochondrial OS=Mus musculus GN=Acad9 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.272e-27 Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 3 Query: 33 VNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKT 434 V+ + + + L GI P+E + + EI S+ ++ AH + + ++ G+ QK KYLPKL SGEH+ A ++EP +GSD ++ +A + +I+NG+K+W TNG +A V+AKT Sbjct: 99 VDTLEKLKSLGLFGIQVPEEYGGLGLSNTMYA-RLGEIISLDASITVTLAAHQAIGLKGIILVGNDEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKT 233 HSP 2 Score: 62.7734 bits (151), Expect = 3.272e-27 Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 2 Query: 458 ITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 +TAFI+E+ G + + DKLG+RGS+TCE+ FEN VP ENVLG+ G G V M+ L+ R + + Sbjct: 246 MTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGS 313
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADV_HUMAN (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADVL PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.590e-26 Identity = 45/142 (31.69%), Postives = 74/142 (52.11%), Query Frame = 3 Query: 15 SLLLQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKT 434 +L + + W+ + G+ P E + +E + VG++ GAH ++ ++ G+ AQK+KYLPKL SGE V A ++EP++GSD ++ A G Y +NG+K+W +NG +A V+AKT Sbjct: 124 ALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKT 265 HSP 2 Score: 55.0694 bits (131), Expect = 1.590e-26 Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 2 Query: 458 ITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 ITAF++E+G G + K+G++ S+T E+ F+ VP+ENVLG+ G G V M L+ R +AA Sbjct: 279 ITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAA 346
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADL_MACFA (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADL PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.786e-26 Identity = 36/132 (27.27%), Postives = 72/132 (54.55%), Query Frame = 3 Query: 39 LWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 +W+ G L G+ + + EE + ++ S G + HS + ++ + +GS Q ++P++ +G+ +GA+AM+E AGSD+ G+K A + +I+NG+K++ +NG ++ ++V A T Sbjct: 89 VWEKAGKQGLLGVNIAEHLGGIGGDLYYAAVVWEEQAYSNCS-GPGFSVHSGIVMSYITNYGSEEQIKHFIPQMTAGKCIGAIAMTELGAGSDLQGIKTNAKKDGSDWILNGSKVFISNGWLSDVVIVVAVT 219 HSP 2 Score: 68.1662 bits (165), Expect = 7.786e-26 Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 449 SKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLA 658 ++GI+ F++E GM GF +KL K+G++ DT EL FE+ +P +LG+E KG Y +M L ERL++A Sbjct: 227 ARGISLFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDVRLPASALLGEENKGFYYIMKELPQERLLIA 296
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADV_MACFA (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADVL PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.310e-25 Identity = 42/123 (34.15%), Postives = 68/123 (55.28%), Query Frame = 3 Query: 72 GITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKT 434 G+ P E + +E + +VG++ GAH ++ ++ G+ AQK+KYLPKL SGE + A ++EP++GSD ++ A G Y +NG+K+W +NG +A V+AKT Sbjct: 143 GLQVPSELGGVGLCNTQYARLVEIVGMHDLAVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETLAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKT 265 HSP 2 Score: 55.4546 bits (132), Expect = 1.310e-25 Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 2 Query: 458 ITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 ITAF++E+G G + K+G++ S+T E++F+ VP+ENVLG+ G G V M L+ R +AA Sbjct: 279 ITAFVVERGFGGVTHGPPEKKMGIKASNTAEVLFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAA 346
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACDSB_DICDI (Probable short/branched chain specific acyl-CoA dehydrogenase OS=Dictyostelium discoideum GN=acadsb PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.910e-25 Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 2 Query: 446 GSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 G KGITAFI+E PG +K DKLG+R S TCE++ +NC V ++LG+ G+G + + GL+ R+ +AA Sbjct: 207 GYKGITAFIVESNNPGLRIGKKEDKLGIRASSTCEVILDNCVVKPTDILGELGRGYKIAIEGLNEGRIGIAA 278 HSP 2 Score: 64.3142 bits (155), Expect = 2.910e-25 Identity = 39/131 (29.77%), Postives = 65/131 (49.62%), Query Frame = 3 Query: 39 LWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADR-VDGGYIINGNKMWCTNGPVAQTLVVYA 428 L K + + NL GI IA+EE+++ ++ + + L N + R+GS Q++KYL +++ VG+ +SE +GSD + +A R DG +++NG K W TN A +V A Sbjct: 71 LLKDLFDMNLMGIDISDSYGGANMNFMGSIIAIEELAKVDPAISVIVDVQNTLVNNCINRYGSIQQREKYL-SMLATNTVGSFCLSESGSGSDAFALATRAVRQSDGTFVLNGTKQWITNAKEAGVFIVMA 200
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACDSB_RAT (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadsb PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.925e-25 Identity = 41/101 (40.59%), Postives = 62/101 (61.39%), Query Frame = 3 Query: 129 IAMEEISRASGSVGLSYGAHSNLCINQLVR-HGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYA 428 + +EE+++ SV L N IN+L R HG+ QK YLPKL++ E +G+ +SE AGSD +K +AD+ Y+ING+KMW +N A+ +V+A Sbjct: 123 LVIEELAKVDASVALLCDIQ-NTVINKLFRKHGTEEQKATYLPKLVT-EKLGSFCLSEAGAGSDSFALKTRADKSGNYYVINGSKMWISNAEHAELFLVFA 221 HSP 2 Score: 60.8474 bits (146), Expect = 4.925e-25 Identity = 28/73 (38.36%), Postives = 46/73 (63.01%), Query Frame = 2 Query: 443 AGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 +G +GIT F++++ GF ++ +K+G+R S TC+L FEN VP +VLG+ G G + L+ R+ +AA Sbjct: 227 SGYRGITCFLVDRDTEGFQIGRRENKMGIRASSTCQLTFENVKVPETSVLGKIGHGYKYAIGSLNEGRIGIAA 299 The following BLAST results are available for this feature:
BLAST of FC930072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930072 ID=FC930072; Name=FC930072; organism=Citrus clementina; type=EST; length=668bpback to top |