FC930072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACAD8_MOUSE (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acad8 PE=2 SV=2) HSP 1 Score: 62.7734 bits (151), Expect = 1.008e-17 Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 2 Query: 443 AGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 +G+KGI+ ++EKG PG S +K K+G T ++FE+C VP N +G EG+G + M GL+ R+ +A+ Sbjct: 208 SGAKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGTEGQGFLIAMKGLNGGRINVAS 280 HSP 2 Score: 48.1358 bits (113), Expect = 1.008e-17 Identity = 24/87 (27.59%), Postives = 44/87 (50.57%), Query Frame = 3 Query: 174 SYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 +Y + N+C + G+ Q+ K+ P L + E + ++EP +GSD + A + YI+NG+K + + G + VV +T Sbjct: 119 AYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKQQGDHYILNGSKAFISGGGESDIYVVMCRT 205
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: GCDH_MACFA (Glutaryl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=GCDH PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.388e-16 Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 3 Query: 141 EISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAK 431 E+ R + S L ++ + +GS Q+ KYLP+L GE +G ++EPN+GSD M+ +A + + Y +NG K W TN P+A VV+A+ Sbjct: 129 ELERVDSGYRSAMSVQSPLVMHPIYAYGSEEQRQKYLPRLAKGELLGCFGLTEPNSGSDPSSMETRARYNSSNKSYTLNGTKTWITNSPMADLFVVWAR 227 HSP 2 Score: 35.4242 bits (80), Expect = 1.388e-16 Identity = 17/45 (37.78%), Postives = 25/45 (55.56%), Query Frame = 2 Query: 458 ITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVL 592 I F++EKGM G S + K +R S T ++ + VP EN+L Sbjct: 233 IRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENML 277
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACAD8_HUMAN (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACAD8 PE=1 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 1.806e-16 Identity = 28/72 (38.89%), Postives = 44/72 (61.11%), Query Frame = 2 Query: 446 GSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 G KGI+ ++EKG PG S +K K+G T ++FE+C VP N +G EG+G + + GL+ R+ +A+ Sbjct: 211 GPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIAS 282 HSP 2 Score: 46.2098 bits (108), Expect = 1.806e-16 Identity = 23/87 (26.44%), Postives = 43/87 (49.43%), Query Frame = 3 Query: 174 SYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 +Y + N+C + G+ Q+ K+ P L + E + ++EP +GSD + A + YI+NG+K + + + VV +T Sbjct: 121 AYISIHNMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRT 207
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: Y897_MYCBO (Uncharacterized protein Mb0897 OS=Mycobacterium bovis GN=fadE10 PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 6.629e-16 Identity = 37/132 (28.03%), Postives = 63/132 (47.73%), Query Frame = 3 Query: 45 KLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVR-HGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAK 431 K + G+ P E + + ++ S+G AH ++ + + ++ G+ QK ++LP+ +G + A ++EP+ GSD M A +D G Y + G K+W TNG VA LVV A+ Sbjct: 88 KGLAELGCFGLKIPSEYGGLNMSQVAYNRVLMMVTTVHSSLGALLSAHQSIGVPEPLKLAGTAEQKRRFLPRCAAGA-ISAFLLTEPDVGSDPARMASTATPIDDGQAYELEGVKLWTTNGVVADLLVVMAR 218 HSP 2 Score: 46.595 bits (109), Expect = 6.629e-16 Identity = 22/69 (31.88%), Postives = 40/69 (57.97%), Query Frame = 2 Query: 455 GITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 GI+AF++E PG + ++ +G+RG + VP +N++G+EG G+ + ++ L+ RL L A Sbjct: 228 GISAFVVEADSPGITVERRNKFMGLRGIENGVTRLHRVRVPKDNLIGREGDGLKIALTTLNAGRLSLPA 296
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: Y873_MYCTU (Uncharacterized protein Rv0873/MT0896 OS=Mycobacterium tuberculosis GN=fadE10 PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 6.629e-16 Identity = 37/132 (28.03%), Postives = 63/132 (47.73%), Query Frame = 3 Query: 45 KLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVR-HGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAK 431 K + G+ P E + + ++ S+G AH ++ + + ++ G+ QK ++LP+ +G + A ++EP+ GSD M A +D G Y + G K+W TNG VA LVV A+ Sbjct: 88 KGLAELGCFGLKIPSEYGGLNMSQVAYNRVLMMVTTVHSSLGALLSAHQSIGVPEPLKLAGTAEQKRRFLPRCAAGA-ISAFLLTEPDVGSDPARMASTATPIDDGQAYELEGVKLWTTNGVVADLLVVMAR 218 HSP 2 Score: 46.595 bits (109), Expect = 6.629e-16 Identity = 22/69 (31.88%), Postives = 40/69 (57.97%), Query Frame = 2 Query: 455 GITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 GI+AF++E PG + ++ +G+RG + VP +N++G+EG G+ + ++ L+ RL L A Sbjct: 228 GISAFVVEADSPGITVERRNKFMGLRGIENGVTRLHRVRVPKDNLIGREGDGLKIALTTLNAGRLSLPA 296
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: GCDH_DICDI (Glutaryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=gcdh PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.548e-14 Identity = 46/135 (34.07%), Postives = 68/135 (50.37%), Query Frame = 3 Query: 30 DVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVD-GGYIINGNKMWCTNGPVAQTLVVYAK 431 D + + G + G T P A+E++ S + S+L ++ + G+ AQK KYL L SG+ VG ++EPNAGSD GM+ +A + G Y++NG K W TN P+A VV+AK Sbjct: 82 DREIMREYGKMGMLGATIPAYGGVSHVAYGLMANAVEKVDSGYRS---AMSVQSSLVMHPINTFGTDAQKSKYLDGLASGDLVGCFGLTEPNAGSDPAGMQTRAVKNSAGNYVLNGTKTWITNSPIADVFVVWAK 213
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: GCDH_BOVIN (Glutaryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=GCDH PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.157e-13 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 3 Query: 141 EISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAK 431 E+ R + S+L + + +GS QK KYLP+L GE +G ++EPN GSD GM+ +A + YI++G+K W TN PVA L+V+A+ Sbjct: 129 ELERVDSGYRSAMSVQSSLVMYPIYAYGSEEQKQKYLPRLAKGELLGCFGLTEPNHGSDPSGMETRARHNPSSRSYILSGSKTWITNSPVADLLIVWAR 227
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACADL_PIG (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADL PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13 Identity = 40/132 (30.30%), Postives = 70/132 (53.03%), Query Frame = 3 Query: 39 LWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 LW+ G L GI + I EE S G + HS++ + + +GS Q ++P++ +G+ +GA+AM+EP AGSD+ G++ A + +I+NG+K++ TNG ++ ++V A T Sbjct: 89 LWEKAGKQGLLGINIAERHGGIGGDLYSAAIVWEE-QAYSNCTGPGFSLHSDIVMPYIANYGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKKDGSDWILNGSKVFITNGWLSDVVIVVAVT 219 HSP 2 Score: 68.1662 bits (165), Expect = 4.498e-11 Identity = 36/96 (37.50%), Postives = 54/96 (56.25%), Query Frame = 2 Query: 371 WEQDVVHQWSSCSDVGCLRKNNIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLA 658 W DVV V + ++ + GI+ F++E GM GF +KL K+G++ DT EL FE+ +P +LG+E KG Y +M L ERL++A Sbjct: 208 WLSDVVI-------VVAVTNREARSPAHGISLFLVENGMKGFVKGRKLHKIGLKAQDTAELFFEDVRLPASALLGEENKGFYYLMQELPQERLLIA 296
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: GCDH_CAEEL (Probable glutaryl-CoA dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=F54D5.7 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13 Identity = 36/100 (36.00%), Postives = 57/100 (57.00%), Query Frame = 3 Query: 141 EISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKT 434 E+ R + ++L I + +GS QK KY+P L SG+ +G ++EPN GS+ GM+ KA D Y +NG+K W +N PV+ +VV+A++ Sbjct: 101 EVERVDSGYRSTMSVQTSLVIGPIYNYGSEDQKQKYIPDLASGKKIGCFGLTEPNHGSNPGGMETKATWDETTKTYKLNGSKTWISNSPVSDVMVVWARS 200
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: GCDH_HUMAN (Glutaryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=GCDH PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12 Identity = 35/99 (35.35%), Postives = 56/99 (56.57%), Query Frame = 3 Query: 141 EISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAK 431 E+ R + S+L ++ + +GS Q+ KYLP+L GE +G ++EPN+GSD M+ +A + + Y +NG K W TN P+A VV+A+ Sbjct: 129 ELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWAR 227 The following BLAST results are available for this feature:
BLAST of FC930072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930072 ID=FC930072; Name=FC930072; organism=Citrus clementina; type=EST; length=668bpback to top |