FC930072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: GCDH_MOUSE (Glutaryl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Gcdh PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12 Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 3 Query: 141 EISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAK 431 E+ R S+L ++ + +GS Q+ KYLP+L GE +G ++EPN GSD GM+ +A + + Y ++G K W TN PVA +V+A+ Sbjct: 129 ELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPRLAKGELLGCFGLTEPNHGSDPGGMETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWAR 227
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: IVD_CAEEL (Probable acyl coa dehydrogenase 6 OS=Caenorhabditis elegans GN=acdh-6 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12 Identity = 40/134 (29.85%), Postives = 68/134 (50.75%), Query Frame = 3 Query: 39 LWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRAS-GSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTT 437 ++K++G + + P + E+I GS+ +S S++ L + GS + ++++L I+G+ V ++A+SEP+AGSDV ++ A R IING+KMW TNG A V T+ Sbjct: 62 VFKMLGQLGVFAVNKPVDYGGTGRDFAMSIAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFLRPSINGDLVSSIAVSEPHAGSDVSAIRTHARRYGSDLIINGSKMWITNGDQADWACVLVNTS 195
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: ACDSB_BOVIN (Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADSB PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.184e-11 Identity = 38/109 (34.86%), Postives = 58/109 (53.21%), Query Frame = 3 Query: 129 IAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTTLKLAQK 455 + +EE+++ SV L + L + ++G+ QK YLPKL + E ++ +SE AGSD MK +AD+ YIING+KMW ++ +A VV A K Sbjct: 123 LVIEELAKVDASVALVCDIQNTLINRMIGKYGTEEQKATYLPKLAT-EKASSICISETGAGSDSFAMKTRADKKGDYYIINGSKMWISSAEIAGLFVVMANADFSAGYK 230
BLAST of FC930072 vs. ExPASy Swiss-Prot
Match: BBSG_THAAR ((R)-benzylsuccinyl-CoA dehydrogenase OS=Thauera aromatica GN=bbsG PE=1 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 3.953e-11 Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 3 Query: 222 GSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMW 386 GSPAQ+DKY+ + GE A+ +EP AGSD+ G+ A R +G ++ING+K++ Sbjct: 117 GSPAQRDKYVRRYCRGEIDSAMMATEPGAGSDISGLTTTAVRENGQWVINGSKIF 171 HSP 2 Score: 33.8834 bits (76), Expect = 3.953e-11 Identity = 23/82 (28.05%), Postives = 40/82 (48.78%), Query Frame = 2 Query: 419 CLRKNNIKAGSKG-ITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAA 661 C+ + +A +K TAFI++K PG ++ +G T + +N V +E VLG+ G + + + R+ LAA Sbjct: 184 CIAVTDKEAPTKRRFTAFILDKDTPGLRIGAEIPVIG--AMPTWSVYLDNVRVGDEAVLGEVGDAFIPLQNRFGVRRIELAA 263 The following BLAST results are available for this feature:
BLAST of FC930072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930072 ID=FC930072; Name=FC930072; organism=Citrus clementina; type=EST; length=668bpback to top |