FC930073
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930073 vs. ExPASy Swiss-Prot
Match: LA2M_MYCSM (Lactate 2-monooxygenase OS=Mycobacterium smegmatis PE=1 SV=3) HSP 1 Score: 62.7734 bits (151), Expect = 6.062e-13 Identity = 38/130 (29.23%), Postives = 66/130 (50.77%), Query Frame = 2 Query: 83 PVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHRLA--NPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSNAVRFYHYMY 466 P++ +++ A+ ALP + AGG+ DEHT + NVEAF PR+L+ + DLS + +AP+ AP L + G+ A+A+A+A + S + S++E++ + Y +Y Sbjct: 24 PMSYADWEAHAQQALPPGVLSYVAGGSGDEHTQRANVEAFKHWGLMPRMLMAATERDLSVELWGKTWAAPMFFAPIGVIALCAQDGHGDAASAQASARTGVPYITSTLAVSSLEDIRKHAGDTPAYFQLY 153 HSP 2 Score: 31.9574 bits (71), Expect = 6.062e-13 Identity = 15/40 (37.50%), Postives = 23/40 (57.50%), Query Frame = 1 Query: 460 YVFKKRDITATLVQRAERNGFKALVLTADTPRLGRREADI 579 Y + RD+ + ++RAE G+ LV+T DT G R D+ Sbjct: 153 YYPEDRDLAESFIRRAEEAGYDGLVITLDTWIFGWRPRDL 192
BLAST of FC930073 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.852e-13 Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = 2 Query: 95 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHRLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVAASSN-AVRFYHYM 463 ++++ A+ LP+ +D+ GGA EHTL+ N I+ R R+L +V + L T + ++ PII++P + GEV ARAAA+ LS S +IEEVA+ S+ A+ F Y+ Sbjct: 7 SDYRAAAKRKLPRFLFDYIDGGAYAEHTLRANGSDLADISLRQRVLKNVDNVSLETRLFGESLAMPIILSPVGLSGMYARRGEVQVARAAANKRIPFCLSTVSVCSIEEVASQSDQAIWFQLYV 130
BLAST of FC930073 vs. ExPASy Swiss-Prot
Match: LLDD_XANP2 (L-lactate dehydrogenase [cytochrome] OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=lldD PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 41/110 (37.27%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 95 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHRLANPEGEVATARAAASCNTIMVLSFTSSSTIEEV 424 ++++E AR LP + + GGA E TL+ NVE + R R+L V +DLSTT+L ++S P+ +AP + GEV A+AA LS S +IEEV Sbjct: 7 SDYREAARRRLPPFLFHYIDGGAYAEATLRRNVEDLSDLALRQRVLKSVGEVDLSTTLLKQQLSMPVGLAPVGLTGMYARRGEVQAAQAATQKGIPFTLSTVSVCSIEEV 116
BLAST of FC930073 vs. ExPASy Swiss-Prot
Match: LLDD_PSEPG (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain GB-1) GN=lldD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 40/110 (36.36%), Postives = 58/110 (52.73%), Query Frame = 2 Query: 98 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHRLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVA 427 +++ A+ LP + + GGA EHTL+ NV I R R+L ++S + LST + D +S P+ +AP + GEV ARAAA+ +S S IEEVA Sbjct: 8 DYRAAAQRKLPPFLFHYADGGAYAEHTLRHNVSDLASIALRQRVLNNMSELSLSTRLFDETLSMPVALAPVGLTGMYARRGEVQAARAAAAHGIPFTMSTVSVCPIEEVA 117
BLAST of FC930073 vs. ExPASy Swiss-Prot
Match: LLDD_PSEMY (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas mendocina (strain ymp) GN=lldD PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 2 Query: 98 EFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHRLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVA 427 +++ A LP + + GGA EHTL+ NV I R R+L ++S +DLST + K+S P+ +AP + GEV A+AAA+ LS S IEEVA Sbjct: 8 DYRAAAERKLPPFLFHYADGGAYAEHTLRRNVADLSNIELRQRVLKNMSELDLSTELFGEKMSMPVGLAPVGLTGMYARRGEVQAAKAAAAKGIPFTLSTVSVCPIEEVA 117
BLAST of FC930073 vs. ExPASy Swiss-Prot
Match: LLDD_SHISS (L-lactate dehydrogenase [cytochrome] OS=Shigella sonnei (strain Ss046) GN=lldD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 95 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHRLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVA 427 ++++ A+ LP + + GGA E+TL+ NVE + R RIL ++S + L TT+ + K+S P+ +AP + GEV A+AA + LS S IEEVA Sbjct: 7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVA 117
BLAST of FC930073 vs. ExPASy Swiss-Prot
Match: LLDD_SHIFL (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri GN=lldD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 95 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHRLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVA 427 ++++ A+ LP + + GGA E+TL+ NVE + R RIL ++S + L TT+ + K+S P+ +AP + GEV A+AA + LS S IEEVA Sbjct: 7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVA 117
BLAST of FC930073 vs. ExPASy Swiss-Prot
Match: LLDD_SHIF8 (L-lactate dehydrogenase [cytochrome] OS=Shigella flexneri serotype 5b (strain 8401) GN=lldD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 95 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHRLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVA 427 ++++ A+ LP + + GGA E+TL+ NVE + R RIL ++S + L TT+ + K+S P+ +AP + GEV A+AA + LS S IEEVA Sbjct: 7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVA 117
BLAST of FC930073 vs. ExPASy Swiss-Prot
Match: LLDD_SHIDS (L-lactate dehydrogenase [cytochrome] OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=lldD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 95 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHRLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVA 427 ++++ A+ LP + + GGA E+TL+ NVE + R RIL ++S + L TT+ + K+S P+ +AP + GEV A+AA + LS S IEEVA Sbjct: 7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADAHGIPFTLSTVSVCPIEEVA 117
BLAST of FC930073 vs. ExPASy Swiss-Prot
Match: LLDD_SHIBS (L-lactate dehydrogenase [cytochrome] OS=Shigella boydii serotype 4 (strain Sb227) GN=lldD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 95 NEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRPRILVDVSRIDLSTTILDYKISAPIIIAPTAFHRLANPEGEVATARAAASCNTIMVLSFTSSSTIEEVA 427 ++++ A+ LP + + GGA E+TL+ NVE + R RIL ++S + L TT+ + K+S P+ +AP + GEV A+AA + LS S IEEVA Sbjct: 7 SDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSEVALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADTHGIPFTLSTVSVCPIEEVA 117 The following BLAST results are available for this feature:
BLAST of FC930073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930073 ID=FC930073; Name=FC930073; organism=Citrus clementina; type=EST; length=697bpback to top |