FC930074

Overview
NameFC930074
Unique NameFC930074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 4.931e-24
Identity = 66/162 (40.74%), Postives = 92/162 (56.79%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGV---VKSNTKCSTVGIQ-GIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 645
            E K   F+RA +AEF+A  LF++IS+ + +G    +KSN     V     ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 6.439e-24
Identity = 68/177 (38.42%), Postives = 95/177 (53.67%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMG----------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI 672
            E+K   F+RA +AEF+A  LF++IS+ + +G          +V+ N K S         AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +AHG   G GLG EIIGT  LV  V + TD +R       P+
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSL--------AFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDNSL--GRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPL 170          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 6.439e-24
Identity = 66/169 (39.05%), Postives = 93/169 (55.03%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI 672
            E K   F+RA +AEF+AT LF++IS+ + +G      N + +      ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RAL Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R       P+
Sbjct:    4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPL 170          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 8.410e-24
Identity = 66/162 (40.74%), Postives = 92/162 (56.79%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGV---VKSNTKCSTVGIQ-GIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 645
            E K   F+RA +AEF+A  LF++IS+ + +G    +KSN     V     ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDNSL--GLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 67/177 (37.85%), Postives = 95/177 (53.67%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMG----------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI 672
            E+K   F+RA +AEF+A  LF++IS+ + +G          +V+ N K S         AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI  + ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R       P+
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSL--------AFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLENSL--GRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPL 170          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 65/169 (38.46%), Postives = 92/169 (54.44%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI 672
            E K   F+RA +AEF+A  LF++IS+ + +G      N + +      ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RAL Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R       P+
Sbjct:    4 EFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGNSL--GRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPL 170          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 65/171 (38.01%), Postives = 93/171 (54.39%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMG----VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI 672
            E K   F+RA +AEF+A  LF++IS+ + +G    V  + T  +      ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R       P+
Sbjct:    4 EFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSL--GLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPL 172          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 64/162 (39.51%), Postives = 91/162 (56.17%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMG----VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKR 645
            E K   F+RA +AEF+A  LF++IS+ + +G    V  + T  +      ++ AFG  I  L      ISG H+NPAVTLGL L+ ++S+ RA+ Y++ QC+GAI    ++ G   +     L  G N +A G   G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDNSL--GRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 65/176 (36.93%), Postives = 97/176 (55.11%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-----VKSNTKCSTVG----IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPI 672
            E K  +F+RA IAEF+A  LF++IS+   +G       K+N    TVG    I  ++ AFG  I  +      +SG H+NPAVTLG  L+ ++S+ +A+ Y++ QCLGA+    ++ G     +   L  G N ++ G + G GLG EI+ TF LV  V + TD +R      VP+
Sbjct:    4 EFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKAN---QTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSL--GLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSVPL 174          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 61/154 (39.61%), Postives = 91/154 (59.09%), Query Frame = 1
Query:  187 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 648
            +F++A  AEF+AT +F+ + V + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY++ QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+KR+
Sbjct:   33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183          
The following BLAST results are available for this feature:
BLAST of FC930074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
AQP1_BOVIN4.931e-2440.74Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_MOUSE6.439e-2438.42Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_HUMAN6.439e-2439.05Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP8.410e-2440.74Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_RAT3.196e-2337.85Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_PONAB3.196e-2338.46Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_PIG5.451e-2338.01Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_CANFA5.451e-2339.51Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQPA_RANES2.705e-2236.93Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP4_MOUSE7.872e-2239.61Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC34003E05EF PostHarvC1 Citrus clementina cDNA clone C34003E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930074 ID=FC930074; Name=FC930074; organism=Citrus clementina; type=EST; length=687bp
GATTGACTGTTTTGTGTTTTTCAGGGACTAGCAGAAATGGAAGGTAAAGA
AGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTG
GGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCG
GCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGC
CGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTAC
TGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGC
ATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTA
CTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCG
GCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATG
GTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTT
CATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAG
CTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACT
TTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGC
CAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCA
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