FC930074

Overview
NameFC930074
Unique NameFC930074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21
Identity = 61/154 (39.61%), Postives = 90/154 (58.44%), Query Frame = 1
Query:  187 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 648
            +F++A  AEF+A  +F+ +SV + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+KR+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21
Identity = 61/154 (39.61%), Postives = 90/154 (58.44%), Query Frame = 1
Query:  187 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 648
            +F++A  AEF+A  +F+ +SV + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+KR+
Sbjct:   36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 186          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 60/154 (38.96%), Postives = 91/154 (59.09%), Query Frame = 1
Query:  187 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 648
            +F++A  AEF+A  +F+ +S+ + +       K   V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G  +V    T G GL  E+I TF LV+T+F++ D+KR+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINW-GGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21
Identity = 60/160 (37.50%), Postives = 91/160 (56.88%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 651
            E+ S +F +A  AEF+AT +F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+V Q +GAI GAG++ G       G LA   N + +  T G  +  E+I TF L   +FS+TD++R++
Sbjct:    4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLA--VNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS 156          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21
Identity = 62/155 (40.00%), Postives = 91/155 (58.71%), Query Frame = 1
Query:  187 SFYRAGIAEFIATFLFLYISV-LTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 648
            +F++A  AEF+A  +F+ +S+  T+    K N     V +  I+  FG  I  +V C   ISGGHINPAVT+ +   RK+S+ +++FY+  QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+KR+
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL--PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 58/160 (36.25%), Postives = 90/160 (56.25%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 651
            E+ S +F +A  AEF+AT +F++  + + +         +   I  IA AFG  I  L      +SGGHINPA+TL L +  ++SL RA FY+  Q +GAI GAG++ G       G LA   N + +  T+G  +  E+I TF L   +F++TD++R++
Sbjct:    4 EVCSVAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA--VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS 156          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 58/154 (37.66%), Postives = 91/154 (59.09%), Query Frame = 1
Query:  187 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRS 648
            +F++A  AEF+A  +F+ +S+ + +    +  K   V +  I+  FG  I  +V C   ISGGHINPAVT+ +   R++S+ +++FY+  QCLGAI GAG++         G L  G   V    + G GL  E+I TF LV+T+F++ D+KR+
Sbjct:   33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRT 183          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.641e-20
Identity = 57/160 (35.62%), Postives = 91/160 (56.88%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 651
            E+ S +F++A  AEF+AT +F++  + + +         +   I  I+ AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+  Q +GAI GAG++         G LA   N +++  T G  +  E+I TF L   +FS+TD++R++
Sbjct:    4 EVCSVAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLA--VNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS 156          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.257e-19
Identity = 57/160 (35.62%), Postives = 90/160 (56.25%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 651
            E+ S +F++A  AEF+AT +F++  + + +         +   I  I+ AFG  I  L      +SGGHINPA+TL L +  ++SL RA+FY+  Q +GAI GAG++         G LA   N + +  T G  +  E+I TF L   +FS+TD++R++
Sbjct:    4 EVCSLAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLA--VNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS 156          
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 56/160 (35.00%), Postives = 90/160 (56.25%), Query Frame = 1
Query:  172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 651
            E+ S +F +A  AEF+AT +F++  + + +         +   +  I+ AFG  I  +      +SGGH+NPA+TL L +  ++SL RA+FY+V Q +GAI GA ++ G         LA   N + +  T G  + AE+I TF L   VFS+TD++R++
Sbjct:    4 EVCSAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNLA--VNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS 156          
The following BLAST results are available for this feature:
BLAST of FC930074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
AQP4_RAT2.290e-2139.61Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_NOTAL2.290e-2139.61Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_HUMAN3.907e-2138.96Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP5_PIG5.102e-2137.50Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
AQP4_DIPME6.664e-2140.00Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQP5_HUMAN4.319e-2036.25Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP4_BOVIN4.319e-2037.66Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP5_MOUSE5.641e-2035.63Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP5_RAT1.257e-1935.63Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP5_SHEEP4.776e-1935.00Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34003E05EF PostHarvC1 Citrus clementina cDNA clone C34003E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930074 ID=FC930074; Name=FC930074; organism=Citrus clementina; type=EST; length=687bp
GATTGACTGTTTTGTGTTTTTCAGGGACTAGCAGAAATGGAAGGTAAAGA
AGAGGATGTTAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTG
GGACGGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCG
GCGCCGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGC
CGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTAC
TGACAGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGC
ATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTA
CTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCG
GCCTGTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATG
GTGATGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTT
CATGGGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAG
CTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACT
TTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGC
CAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCA
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