FC930074
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.217e-14 Identity = 59/178 (33.15%), Postives = 89/178 (50.00%), Query Frame = 1 Query: 157 LFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV--GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK---GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPI 672 ++ PG LK A +AEFI+T +F++ + M K +T G+ A A +FV V A ISGGH+NPAVT G F+ ++L R L Y + Q LG+ +++ G + G +G G + + L EI+ TF LVYTV+ +A D K+ + + PI Sbjct: 14 VYHPGALK------AALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFG---------LTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPI 176
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.590e-14 Identity = 59/175 (33.71%), Postives = 94/175 (53.71%), Query Frame = 1 Query: 196 RAGIAEFIATFLFLYISVLTVMGVVK------SNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVK----GFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPL 684 RA +AEF++TF+F++ +++ + K ++T +T G + +A A +F V +SGGH+NPAVT + ++S+ RA++Y V Q +GAI +++ G G + VA G ++ GL EII TF LVY V+S A D KR + + I+APL Sbjct: 24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFH---------VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPL 185
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.076e-14 Identity = 52/161 (32.30%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSAR 654 EL+S SF+RA AEF AT +++ + + + + + +A AFG + LV ISG H+NPAVT + ++SL RA YM Q LGA+ GA V+ G LA N + + G EI T V +F+ D +R+ + Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFGLGSSLRWAPG-----PLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQ 156
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.076e-14 Identity = 53/155 (34.19%), Postives = 78/155 (50.32%), Query Frame = 1 Query: 172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 636 E+++ F+R+ I+E +A+F++++I GV + S + A A G + L C ISG HINPAVTL L + R +S RA Y+ QC G I GA ++ G G G L + A + G E I TF++V F +TD Sbjct: 58 EIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSV--LLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVTVPGYQGNLQAAISHSA-ALAAWERFGVEFILTFLVVLCYFVSTD 209
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.712e-14 Identity = 59/175 (33.71%), Postives = 87/175 (49.71%), Query Frame = 1 Query: 157 LFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPI 672 ++ PG LK A AEFI+T +F++ + M K + G+ A A +FV V A ISGGH+NPAVT G F+ ++L R L Y V Q LG+ +++ G G+ G + G + + L EI+ TF LVYTV+ +A D K+ + + PI Sbjct: 14 VYHPGALK------AAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTG----GQATGTFGLT--GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPI 176
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.712e-14 Identity = 61/176 (34.66%), Postives = 86/176 (48.86%), Query Frame = 1 Query: 166 PGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV--GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG-LGA---EIIGTFVLVYTVF-SATDAKRSARDSHVPI 672 P E +A +AEFI+T +F+ + M K +T G+ A A +FV V A ISGGH+NPAVT G F+ ++L R + Y + Q LG++ ++K GG V A G + G G L A EI+ TF LVYTV+ +A D K + + PI Sbjct: 11 PDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK---------FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPI 177
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.712e-14 Identity = 53/161 (32.92%), Postives = 76/161 (47.20%), Query Frame = 1 Query: 172 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSAR 654 EL+S SF+RA AEF AT +++ + + + + +A AFG + LV ISG H+NPAVT + ++SL RA YM Q LGA+ GA V+ G LA N + G + EI T V +F+ D +R+ R Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGR 156
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.542e-14 Identity = 57/174 (32.76%), Postives = 84/174 (48.28%), Query Frame = 1 Query: 169 GELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAG--ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPL 684 GE F+R + E + TFLF++I V M + TK ST G A A G + V V TAG ISGGH+NPAVTL L + ++L R+ Y+ Q L + +++ G LA + +A G G+ AE + TF L++ +++ R P+L L Sbjct: 10 GEASEPDFFRGVLGELVLTFLFVFIGVGAAM-TDGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGG-----LATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKLLPGAGPLLTGL 177
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.542e-14 Identity = 55/166 (33.13%), Postives = 82/166 (49.40%), Query Frame = 1 Query: 196 RAGIAEFIATFLFLYISVLT--VMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDG----LGAEIIGTFVLVYTVF-SATDAKRSARDSHVPI 672 RA +AEFI+T +F++ + + N + G+ A A +FV V A ISGGH+NPAVT G+ L ++L R + Y + Q LG++ ++ GG + A G + G G L EI+ TF LVYTV+ +A D K + + PI Sbjct: 22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLL---------SFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPI 178
BLAST of FC930074 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.890e-14 Identity = 58/171 (33.92%), Postives = 94/171 (54.97%), Query Frame = 1 Query: 196 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAI-CGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLG----AEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPL 684 +AG+AEFI+TF+F++ + + K ++ + G+ + A +FV V A ISGGH+NPAV G F+ ++L R + Y++ Q LG+I C A +V ++V A G ++G G+G EI+ TF LVYTV+ +A D K+ ++ I+AP+ Sbjct: 21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLV-----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPI 175 The following BLAST results are available for this feature:
BLAST of FC930074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930074 ID=FC930074; Name=FC930074; organism=Citrus clementina; type=EST; length=687bpback to top |