FC930075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930075 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.950e-17 Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 293 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520 M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76 HSP 2 Score: 86.6557 bits (213), Expect = 1.440e-16 Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 65 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQPEDGRTLADYNIQKESTLHLVLRLRGG 292 M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ D + Y+++ S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76 HSP 3 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 2 Query: 521 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 697 M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESY 59
BLAST of FC930075 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.219e-15 Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 2 Query: 293 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520 M + VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76 HSP 2 Score: 81.6481 bits (200), Expect = 4.633e-15 Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 65 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQPEDGRTLADYNIQKESTLHLVLRLRGG 292 M + VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ +D T+ D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76 HSP 3 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 31/58 (53.45%), Postives = 45/58 (77.59%), Query Frame = 2 Query: 521 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 694 M + VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTD 58
BLAST of FC930075 vs. ExPASy Swiss-Prot
Match: UCRP_MOUSE (Ubiquitin cross-reactive protein OS=Mus musculus GN=Isg15 PE=1 SV=4) HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15 Identity = 50/149 (33.56%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 77 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQPEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520 VK L G + V +S T+ +K +I K G+P QQRL +DG TL+ + ST+ LV++ + I V+ G + EV + T+D +K K+ +E + DQ L F G+ +ED L +Y ++ + T+ LRLRGG Sbjct: 7 VKMLGGNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCTVIKHLRLRGG 155 HSP 2 Score: 71.633 bits (174), Expect = 4.794e-12 Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 2 Query: 305 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 697 VK L G + V +S T+ +K +I K G+P QQRL L+DG TL+ + ST+ LV++ + I V+ G + EV + T+D +K K+ +E + DQ L F G+ +ED L +Y Sbjct: 7 VKMLGGNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEY 138
BLAST of FC930075 vs. ExPASy Swiss-Prot
Match: UBD_HUMAN (Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 6.690e-14 Identity = 48/156 (30.77%), Postives = 80/156 (51.28%), Query Frame = 2 Query: 71 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQPEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520 + V++ +T + D++ +K ++ K +P Q L+ K + R+L+ Y I KE T+HL L++ + +F+ K L+V S ++ VKA I+ K GI P+ Q + GK+LEDG+ +ADY I+K + L L GG Sbjct: 10 VHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACYCIGG 165 HSP 2 Score: 76.2554 bits (186), Expect = 1.947e-13 Identity = 45/145 (31.03%), Postives = 76/145 (52.41%), Query Frame = 2 Query: 299 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVKTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYTFRKNH 715 + V++ +T + D++ +K ++ K +P Q L+ K L+ R+L+ Y I KE T+HL L++ + +F+ K L+V S ++ VKA I+ K GI P+ Q + GK+LEDG+ +ADY RK + Sbjct: 10 VHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGN 154
BLAST of FC930075 vs. ExPASy Swiss-Prot
Match: UCRP_HUMAN (Interferon-induced 17 kDa protein OS=Homo sapiens GN=ISG15 PE=1 SV=5) HSP 1 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 51/151 (33.77%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 77 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF--AGKQPEDGRTLADYNIQKESTLHLVL-RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520 VK L G + + SS ++ +KA+I K G+ QQRL +G +D LA + ST+ LV+ + + I V+ G++ T EV + T+ ++K ++ EG+ D L F GK LED L +Y ++ ST+ + LRLRGG Sbjct: 7 VKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRGG 157
BLAST of FC930075 vs. ExPASy Swiss-Prot
Match: UBD_RAT (Ubiquitin D OS=Rattus norvegicus GN=Ubd PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.068e-11 Identity = 43/146 (29.45%), Postives = 71/146 (48.63%), Query Frame = 2 Query: 101 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQPEDGRTLADYNIQKESTLHLVLRL------RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520 +T + SD + + I+ + + Q L+ K + R L+ Y I KE+T+HL L++ + + G+ L V S ++ VK I++ +PP +Q + GK+LEDG+ +ADYNI+ S L L GG Sbjct: 16 MTFDTTMSDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRALSSYGIDKENTIHLTLKVVKPSDEELPLSLVESGDEGQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQIVNCNGKRLEDGKIMADYNIKSGSLLFLTAHCIGG 161
BLAST of FC930075 vs. ExPASy Swiss-Prot
Match: UCRP_BOVIN (Ubiquitin cross-reactive protein OS=Bos taurus GN=ISG15 PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 3.108e-11 Identity = 46/150 (30.67%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 77 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQP--EDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520 VK L G+ I + + S T+ +K I K +P QQRL + ++G L ++ ST+ LV++ + I V+ G++ EV+ T+ +K ++ KE + DQ L F G+ ++D L +Y + K T+ + LRLRGG Sbjct: 7 VKMLGGQEILVPLRDSMTVSELKQFIAQKINVPAFQQRLAHLDSREVLQEGVPLVLQGLRAGSTVLLVVQ--NCISILVRNDKGRSSPYEVQLKQTVAELKQQVCQKERVQADQFWLSFEGRPMDDEHPLEEYGLMKGCTVFMNLRLRGG 154
BLAST of FC930075 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.301e-11 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 293 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520 M++F++TLTG L V +T+ +VKAKI+ EGIP +Q LI+ +LE+ L DYNI + TL LVL +RGG Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGG 103
BLAST of FC930075 vs. ExPASy Swiss-Prot
Match: UBD_MOUSE (Ubiquitin D OS=Mus musculus GN=Ubd PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 43/148 (29.05%), Postives = 72/148 (48.65%), Query Frame = 2 Query: 95 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQPEDGRTLADYNIQKESTLHLVLRL----RGGMQIFV--KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 520 + +T E +D + + I+ + + Q L+ K + R L+ Y I KE+T+HL L++ + +F+ G+ L V S ++ VK I+ + P +Q + GK+LEDG+ +ADYNI+ S L L GG Sbjct: 15 RLMTFETTENDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRKLSSYGIDKETTIHLTLKVVKPSDEELPLFLVESKNEGQRHLLRVRRSSSVAQVKEMIESVTSVIPKKQVVNCNGKKLEDGKIMADYNIKSGSLLFLTTHCTGG 162 The following BLAST results are available for this feature:
BLAST of FC930075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930075 ID=FC930075; Name=FC930075; organism=Citrus clementina; type=EST; length=732bpback to top |