FC930079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930079 vs. ExPASy Swiss-Prot
Match: GPX4_CEBAP (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Cebus apella GN=GPX4 PE=2 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 4.540e-31 Identity = 66/134 (49.25%), Postives = 92/134 (68.66%), Query Frame = 3 Query: 300 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKFLVDK 695 S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN EIKEFA + +F +F K+ VNG + P+++++K G LG+ +KWNF KFL+DK Sbjct: 40 SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK 172
BLAST of FC930079 vs. ExPASy Swiss-Prot
Match: GPX4_PIG (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Sus scrofa GN=GPX4 PE=1 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 7.744e-31 Identity = 65/135 (48.15%), Postives = 93/135 (68.89%), Query Frame = 3 Query: 297 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKFLVDK 695 +S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGS+ EIKEFA + +F +F K+ VNG + P+++++K G LG+ +KWNF KFL+DK Sbjct: 39 RSMHEFSAKDIDGHMVNLDKYRGYVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSDAEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDK 172
BLAST of FC930079 vs. ExPASy Swiss-Prot
Match: GPX42_MOUSE (Phospholipid hydroperoxide glutathione peroxidase, nuclear OS=Mus musculus GN=Gpx4 PE=2 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 7.744e-31 Identity = 65/135 (48.15%), Postives = 93/135 (68.89%), Query Frame = 3 Query: 297 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKFLVDK 695 +S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN EIKEFA + +F ++ K+ VNG + P+++++K G LG+ +KWNF KFL+DK Sbjct: 95 RSMHEFSAKDIDGHMVCLDKYRGFVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVKFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDK 228
BLAST of FC930079 vs. ExPASy Swiss-Prot
Match: GPX41_MOUSE (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Mus musculus GN=Gpx4 PE=1 SV=4) HSP 1 Score: 134.035 bits (336), Expect = 7.744e-31 Identity = 65/135 (48.15%), Postives = 93/135 (68.89%), Query Frame = 3 Query: 297 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKFLVDK 695 +S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN EIKEFA + +F ++ K+ VNG + P+++++K G LG+ +KWNF KFL+DK Sbjct: 39 RSMHEFSAKDIDGHMVCLDKYRGFVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVKFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDK 172
BLAST of FC930079 vs. ExPASy Swiss-Prot
Match: GPX4_MACFU (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Macaca fuscata fuscata GN=GPX4 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 1.011e-30 Identity = 65/135 (48.15%), Postives = 93/135 (68.89%), Query Frame = 3 Query: 297 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKFLVDK 695 +S+++F+ KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN +IKEFA + +F +F K+ VNG + P+++++K G LG+ +KWNF KFL+DK Sbjct: 39 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGVRILAFPCNQFGKQEPGSNEKIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDK 172
BLAST of FC930079 vs. ExPASy Swiss-Prot
Match: GPX42_RAT (Phospholipid hydroperoxide glutathione peroxidase, nuclear OS=Rattus norvegicus GN=Gpx4 PE=2 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.321e-30 Identity = 65/135 (48.15%), Postives = 91/135 (67.41%), Query Frame = 3 Query: 297 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKFLVDK 695 +S+++F KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN EIKEFA + F ++ K+ VNG + P+++++K G LG+ +KWNF KFL+DK Sbjct: 95 RSMHEFAAKDIDGHMVCLDKYRGCVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVRFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDK 228
BLAST of FC930079 vs. ExPASy Swiss-Prot
Match: GPX41_RAT (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Rattus norvegicus GN=Gpx4 PE=1 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.321e-30 Identity = 65/135 (48.15%), Postives = 91/135 (67.41%), Query Frame = 3 Query: 297 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKFLVDK 695 +S+++F KDIDG V L K++G V ++ NVAS+ G T NY++L L+ +Y G ILAFPCNQFG QEPGSN EIKEFA + F ++ K+ VNG + P+++++K G LG+ +KWNF KFL+DK Sbjct: 39 RSMHEFAAKDIDGHMVCLDKYRGCVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVRFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDK 172
BLAST of FC930079 vs. ExPASy Swiss-Prot
Match: GPXA_NEIMF (Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=gpxA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.943e-30 Identity = 73/152 (48.03%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 303 LYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKS----SAGGFL-----------------GDLVKWNFEKFLVDK 695 +YDF +KD +G V LS ++GKVLLIVN A+RCGLTP Y L LY +Y +G EIL FPCNQF Q P S+ EI + +F +F IFDK++VNG NTAP+Y +LKS G L GD +KWNF KFLV++ Sbjct: 3 IYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQ-YEALQKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANTAPLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGD-IKWNFTKFLVNR 152
BLAST of FC930079 vs. ExPASy Swiss-Prot
Match: GPXA_NEIMC (Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup C GN=gpxA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.943e-30 Identity = 73/152 (48.03%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 303 LYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKS----SAGGFL-----------------GDLVKWNFEKFLVDK 695 +YDF +KD +G V LS ++GKVLLIVN A+RCGLTP Y L LY +Y +G EIL FPCNQF Q P S+ EI + +F +F IFDK++VNG NTAP+Y +LKS G L GD +KWNF KFLV++ Sbjct: 3 IYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQ-YEALQKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANTAPLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGD-IKWNFTKFLVNR 152
BLAST of FC930079 vs. ExPASy Swiss-Prot
Match: GPXA_NEIMB (Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup B GN=gpxA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.943e-30 Identity = 73/152 (48.03%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 303 LYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKS----SAGGFL-----------------GDLVKWNFEKFLVDK 695 +YDF +KD +G V LS ++GKVLLIVN A+RCGLTP Y L LY +Y +G EIL FPCNQF Q P S+ EI + +F +F IFDK++VNG NTAP+Y +LKS G L GD +KWNF KFLV++ Sbjct: 3 IYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQ-YEALQKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANTAPLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGD-IKWNFTKFLVNR 152 The following BLAST results are available for this feature:
BLAST of FC930079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930079 ID=FC930079; Name=FC930079; organism=Citrus clementina; type=EST; length=726bpback to top |