FC930080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930080 vs. ExPASy Swiss-Prot
Match: PTGR1_RAT (Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3) HSP 1 Score: 134.806 bits (338), Expect = 4.504e-31 Identity = 87/217 (40.09%), Postives = 122/217 (56.22%), Query Frame = 1 Query: 67 VSNKRVILSNYVTGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQIL-IKIQHTD-VPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALK 711 V K L + GFP +S+ ++ + ++ + VLL+ L+LS DPYMR KL G+ + G VA+V++S + + +V GW +S+ + + + D +PLS G +GMPG+TAY GL ++C K GE V V+AA+GAVG +VGQ AKL GC VVG+AGS EKV LK K GFD AFNYK L+ AL+ Sbjct: 2 VQAKTWTLKKHFEGFPTDSNFELRT----TELPPLNNGEVLLEALFLSVDPYMRVAAKKLKE---------GDSMMGEQVARVVESKNSAFPTGTIVVALLGWTSHSISDGNGLRKLPAEWPDKLPLSLALGTVGMPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALR 204
BLAST of FC930080 vs. ExPASy Swiss-Prot
Match: PTGR1_CAVPO (Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.504e-31 Identity = 90/219 (41.10%), Postives = 121/219 (55.25%), Query Frame = 1 Query: 67 VSNKRVILSNYVTGFPKESDMKITSGSIK-LKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQI--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKR 714 V K L + G P +SD ++ + + LK E VLL+ L+LS DPYMR +L G + G VA+V++S + + +V +GW + + + L+ +PLS G +GMPG+TAY GL EVC K GE V VSAA+GAVG +VGQ AKL GC VVG+AGS EK+ LK + GFD AFNYK L+ ALK+ Sbjct: 2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGE-----VLLEALFLSVDPYMRIASKRLKE---------GAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKK 205
BLAST of FC930080 vs. ExPASy Swiss-Prot
Match: PTGR2_BOVIN (Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.188e-23 Identity = 75/221 (33.94%), Postives = 115/221 (52.04%), Query Frame = 1 Query: 76 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQILIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC 717 +RV+L++ G P + ++ ++ V EG V ++ LYLS DPYMR RM++ ++ + + ++G GV + +S H N+ K D V F + ++ IL K+ Q D LSY+ G +GMPG+T+ G+ E + + + VS A+GA G L GQ +L GC VVG G+ EK L ++ GFD A NYKE + K C Sbjct: 4 QRVVLNSRPGKNGHPVAENFRVEEVNLPDCVNEGQ---VQVRTLYLSVDPYMRCRMNEDTGSDYITPWQLSQVVDGGGVGIIEESKHTNFMKGDFVTSFYWPWQTKVILDGNILEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHITAGSNQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGTPEKCLFLTSELGFDAAINYKEGNVAEQLHKLC 221
BLAST of FC930080 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.452e-21 Identity = 70/221 (31.67%), Postives = 113/221 (51.13%), Query Frame = 1 Query: 76 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQILIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC 717 +RV+L++ G P + ++ + + EG V ++ LYLS DPYMR RM++ ++ + + ++G G+ + +S H N K D V F + ++ L K+ Q D LSY+ G +GMPG+T+ G+ E + + + VS A+GA G + GQ L GC VVG G+ EK LL ++ GFD A NYK++ + + C Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ---VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLLTSELGFDAAINYKKDNVAEQLRESC 221
BLAST of FC930080 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 69/221 (31.22%), Postives = 112/221 (50.68%), Query Frame = 1 Query: 76 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQILIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYKEEPDLDAALKRC 717 +RV+L++ G P + ++ + + EG V ++ LYLS DPYMR RM++ ++ + + ++G G+ + +S H N K D V F + ++ L K+ Q D LSY+ G +GMPG+T+ G+ E + + + VS A+GA G + GQ GC VVG G+ EK LL ++ GFD A NYK++ + + C Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ---VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESC 221
BLAST of FC930080 vs. ExPASy Swiss-Prot
Match: PTGR2_RAT (Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.577e-20 Identity = 69/209 (33.01%), Postives = 107/209 (51.20%), Query Frame = 1 Query: 76 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGF-TGWEEYSLVTAPQI-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYK 681 +RV+L + G P + ++ S+ + EG V ++ LYLS DPYMR +M++ ++ + + +G G+ + +S H AK D V F W+ +++ + + Q D LSY+ G +GMPG+T+ G+ E S + + VS A+GA G L GQ L GC VVG G+ EK L ++ GFD A NYK Sbjct: 4 QRVVLDSRPGKNGNPVAENFRVEEVSLPDTINEGQ---VRVRTLYLSVDPYMRCKMNEETGADYLAPWQLAQVADGGGLGVIEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHVSAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTHEKCLFLTSELGFDAAVNYK 209
BLAST of FC930080 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.672e-20 Identity = 69/209 (33.01%), Postives = 108/209 (51.67%), Query Frame = 1 Query: 76 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGF-TGWEEYSLVTAPQI-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSAASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNKFGFDDAFNYK 681 +RV+L++ G P + ++ S+ + EG V ++ LYLS DPYMR +M++ ++ + + +G G+ V +S H K D V F W+ +++ + + Q D LSY+ G +GMPG+T+ G+ E S + + VS A+GA G L GQ L GC VVG G++EK L ++ GFD A NYK Sbjct: 4 QRVVLNSRPGKNGNPVAENFRVEEFSLPDALNEGQ---VQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYK 209 The following BLAST results are available for this feature:
BLAST of FC930080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930080 ID=FC930080; Name=FC930080; organism=Citrus clementina; type=EST; length=720bpback to top |