FC930082

Overview
NameFC930082
Unique NameFC930082
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26
Identity = 71/160 (44.38%), Postives = 88/160 (55.00%), Query Frame = 1
Query:  217 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGM 684
            F  FK+ + +AY +  E  +R   F+ NL      Q  +P A  G+T+F DL+ AEF   YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G +EG  +LA  +LVSLSEQQLV CD   D      CD G+
Sbjct:   38 FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMND-----GCDGGL 192          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.422e-26
Identity = 71/160 (44.38%), Postives = 88/160 (55.00%), Query Frame = 1
Query:  217 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGM 684
            F  FK+ + +AY +  E  +R   F+ NL      Q  +P A  G+T+F DL+ AEF   YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G +EG  +LA  +LVSLSEQQLV CD   D      CD G+
Sbjct:   38 FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVSCDDMND-----GCDGGL 192          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.857e-26
Identity = 70/155 (45.16%), Postives = 93/155 (60.00%), Query Frame = 1
Query:  244 KAYASQEEHDRRFTIFKANLRRAARRQKL-DPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP--ILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            K Y    E +RRF IFK NL+       + D +   G+T+F+DLT  EFR  YL  R+K+   KD+ +    +    D LP + DWR  GAV  VKDQG+CGSCW+FS  GA+EG N + TG+L+SLSEQ+LVDCD        G  ++G  GG+
Sbjct:   53 KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYL--RKKMERTKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDR-------GFVNAGCDGGI 198          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.426e-26
Identity = 66/164 (40.24%), Postives = 91/164 (55.49%), Query Frame = 1
Query:  154 GDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 636
            GD +L+  E  +N        F  +K ++NK Y+SQ+EHD RF  FKA  +  A     + S   G+  ++DL+  EF      ++ K+  P       +     L   P+  DWR +  V PVKDQG CGSCW+F +TG+LEG N +  G+LVSLSEQQLVDC
Sbjct:  211 GDNLLAKEEQASN-------LFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTL---VKPKVARPSVTGADSVHDDESLRSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDC 364          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 4.138e-26
Identity = 70/163 (42.94%), Postives = 87/163 (53.37%), Query Frame = 1
Query:  184 TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI------LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE 645
            + +DL   E    LF     K NK Y + +E   RF IFK NL+    R K+      G+ +FSDL+  EF+  Y+G      LP+D    P           DLP   DWR KGAV PVK QG C SCW+FST   +EG N + TG LV LSEQ+LVDCD +
Sbjct:   34 SQDDLTSTERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVG-----SLPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDKQ 191          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.138e-26
Identity = 73/171 (42.69%), Postives = 91/171 (53.22%), Query Frame = 1
Query:  133 IRQVTDGGDEILSHHESTNNDLLGAEH---HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 636
            IR VTD     L   EST    LG       F+ F  ++ K+Y S  E  +RF IF  +L+      +   S   G+ +F+D++  EFR T LG  +        +         LP   DWRE G V PVK+QG CGSCW+FSTTGALE A   ATGK +SLSEQQLVDC
Sbjct:   31 IRPVTDRAASAL---ESTVFAALGRTRDALRFARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDC 198          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.058e-26
Identity = 65/177 (36.72%), Postives = 99/177 (55.93%), Query Frame = 1
Query:  175 HESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDP-SATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPT--NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            H+  ++     +H F  F+ +F + Y S  E   R  IF+ NL+        +  SA +G+T+F+D+T +E++    GL ++         A ++P    +LP +FDWR+K AV  VK+QGSCGSCW+FS TG +EG   + TG+L   SEQ+L+DCD         + DS  +GGL
Sbjct:  294 HKKHSHRFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGL 460          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.204e-25
Identity = 68/162 (41.98%), Postives = 90/162 (55.56%), Query Frame = 1
Query:  184 TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILP-TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCD---HEC 648
            + +DL   E    LF       NK Y + +E   RF IFK NL       K + S   G+ +F+DL+  EF   Y+G      + +  D+  I   T +LP + DWR+KGAV PV+ QGSCGSCW+FS    +EG N + TGKLV LSEQ+LVDC+   H C
Sbjct:   34 SQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQSYDEEFINEDTVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGC 195          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.204e-25
Identity = 67/169 (39.64%), Postives = 92/169 (54.44%), Query Frame = 1
Query:  193 DLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGMHGGL 696
            DLL A  +F  F  KFNK Y+S+ E  RRF IF+ NL     + + D SA + + +FSDL+  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+F+T G+LE    +   +L++LSEQQL+DCD           D G  GGL
Sbjct:   20 DLLKAPSYFEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISKYTGLSLPLQKQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDVGCDGGL 179          
BLAST of FC930082 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.572e-25
Identity = 63/147 (42.86%), Postives = 83/147 (56.46%), Query Frame = 1
Query:  244 KAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGM 684
            K+Y S EE   R+ IFKAN+    +          G+  F+D+T  E+R TYLG +          +  +  T+   A  DWR +GAV PVK+QG CG CWSFSTTG+ EGA+F + G+LVSLSEQ L+DC       E   CD G+
Sbjct:   39 KSYTS-EEFGARYNIFKANMDYVQQWNSKGSETVLGLNNFADITNEEYRNTYLGTKFDASSLIGTQEEKVFTTSSA-ASKDWRSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCS-----TENSGCDGGL 178          
The following BLAST results are available for this feature:
BLAST of FC930082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
LMCPB_LEIME1.422e-2644.38Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI1.422e-2644.38Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CPR1_ARATH1.857e-2645.16Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CFAD_DICDI2.426e-2640.24Counting factor associated protein D OS=Dictyostel... [more]
PAPA4_CARPA4.138e-2642.94Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CYSP2_MAIZE4.138e-2642.69Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CPR1_DROME7.058e-2636.72Putative cysteine proteinase CG12163 OS=Drosophila... [more]
PAPA3_CARPA1.204e-2541.98Caricain OS=Carica papaya PE=1 SV=2[more]
CATV_NPVAP1.204e-2539.64Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CYSP5_DICDI1.572e-2542.86Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionC34003F02EF PostHarvC1 Citrus clementina cDNA clone C34003F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930082 ID=FC930082; Name=FC930082; organism=Citrus clementina; type=EST; length=698bp
GAACGAACGCTTCTATTGATATCAGCATTGTCTAAAAACATGGGATCTAA
AACAGTAGTTTTCTTTCTGGTCTCTCTCGTCGTCGTCTCCGCCGTTTCAT
CAGGGACGTTGATCGACGATGTTGATCAGCTGATCAGGCAAGTAACGGAC
GGCGGTGACGAGATCCTAAGCCACCACGAGAGCACCAACAACGACCTCTT
GGGCGCAGAGCACCACTTCTCCCTATTCAAGAAGAAGTTCAATAAAGCGT
ACGCTTCGCAGGAGGAGCACGACCGTAGGTTCACTATTTTCAAGGCCAAC
TTGCGACGCGCCGCGCGTCGCCAGAAGCTCGACCCGAGCGCCACCCACGG
CGTCACTCAGTTCTCCGACTTGACTCCGGCCGAGTTCCGCCGGACGTACC
TTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGATGCGGATCAGGCGCCG
ATCTTGCCTACGAATGATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGG
CGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGCGGATCATGCTGGAGTT
TCAGTACAACAGGGGCCTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAG
CTTGTGAGCCTCAGTGAGCAACAGCTTGTGGATTGCGATCATGAGTGTGA
TCCTGAGGAACCAGGTTCTTGTGATTCTGGGATGCATGGTGGGCTTAT
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